BLASTX nr result

ID: Bupleurum21_contig00031531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031531
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190187.1| actin depolymerizing factor 1 [Arabidopsis thal...   103   2e-20
ref|NP_001078247.1| actin depolymerizing factor 1 [Arabidopsis t...   103   2e-20
ref|XP_002864657.1| hypothetical protein ARALYDRAFT_332260 [Arab...   100   1e-19
ref|NP_568916.2| actin depolymerizing factor 4 [Arabidopsis thal...   100   1e-19
ref|NP_851228.1| actin depolymerizing factor 4 [Arabidopsis thal...   100   1e-19

>ref|NP_190187.1| actin depolymerizing factor 1 [Arabidopsis thaliana]
           gi|17366511|sp|Q39250.1|ADF1_ARATH RecName:
           Full=Actin-depolymerizing factor 1; Short=ADF-1;
           Short=AtADF1 gi|11513711|pdb|1F7S|A Chain A, Crystal
           Structure Of Adf1 From Arabidopsis Thaliana
           gi|1408471|gb|AAB03696.1| actin depolymerizing factor 1
           [Arabidopsis thaliana] gi|3851707|gb|AAC72407.1| actin
           depolymerizing factor 1 [Arabidopsis thaliana]
           gi|7630029|emb|CAB88325.1| actin depolymerizing factor 1
           (ADF1) [Arabidopsis thaliana] gi|14334962|gb|AAK59658.1|
           putative actin depolymerizing factor ADF1 [Arabidopsis
           thaliana] gi|17065584|gb|AAL33770.1| putative actin
           depolymerizing factor 1 [Arabidopsis thaliana]
           gi|21553985|gb|AAM63066.1| actin-depolymerizing factor
           ADF-1 (AtADF1) [Arabidopsis thaliana]
           gi|195604826|gb|ACG24243.1| hypothetical protein [Zea
           mays] gi|332644579|gb|AEE78100.1| actin depolymerizing
           factor 1 [Arabidopsis thaliana]
          Length = 139

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/63 (84%), Positives = 57/63 (90%), Gaps = 3/63 (4%)
 Frame = +3

Query: 63  AENCQKSRIFFIARCPDIALVRSKMIYASSKDRFKRELGGIQVELQATEPTEMDI---RS 233
           AENCQKS+IFFIA CPDIA VRSKMIYASSKDRFKREL GIQVELQAT+PTEMD+   RS
Sbjct: 77  AENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRS 136

Query: 234 RSN 242
           R+N
Sbjct: 137 RAN 139


>ref|NP_001078247.1| actin depolymerizing factor 1 [Arabidopsis thaliana]
           gi|332644580|gb|AEE78101.1| actin depolymerizing factor
           1 [Arabidopsis thaliana]
          Length = 150

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/63 (84%), Positives = 57/63 (90%), Gaps = 3/63 (4%)
 Frame = +3

Query: 63  AENCQKSRIFFIARCPDIALVRSKMIYASSKDRFKRELGGIQVELQATEPTEMDI---RS 233
           AENCQKS+IFFIA CPDIA VRSKMIYASSKDRFKREL GIQVELQAT+PTEMD+   RS
Sbjct: 88  AENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRS 147

Query: 234 RSN 242
           R+N
Sbjct: 148 RAN 150


>ref|XP_002864657.1| hypothetical protein ARALYDRAFT_332260 [Arabidopsis lyrata subsp.
           lyrata] gi|297310492|gb|EFH40916.1| hypothetical protein
           ARALYDRAFT_332260 [Arabidopsis lyrata subsp. lyrata]
          Length = 132

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/63 (80%), Positives = 56/63 (88%), Gaps = 3/63 (4%)
 Frame = +3

Query: 63  AENCQKSRIFFIARCPDIALVRSKMIYASSKDRFKRELGGIQVELQATEPTEMD---IRS 233
           AENCQKS+IFFIA CPD+A VRSKMIYASSKDRFKREL GIQVELQAT+PTEMD   ++S
Sbjct: 70  AENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKS 129

Query: 234 RSN 242
           R N
Sbjct: 130 RVN 132


>ref|NP_568916.2| actin depolymerizing factor 4 [Arabidopsis thaliana]
           gi|15215859|gb|AAK91473.1| AT5g59890/mmn10_110
           [Arabidopsis thaliana] gi|19699262|gb|AAL90997.1|
           At1g05180/YUP8H12_21 [Arabidopsis thaliana]
           gi|332009865|gb|AED97248.1| actin depolymerizing factor
           4 [Arabidopsis thaliana]
          Length = 132

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/63 (80%), Positives = 56/63 (88%), Gaps = 3/63 (4%)
 Frame = +3

Query: 63  AENCQKSRIFFIARCPDIALVRSKMIYASSKDRFKRELGGIQVELQATEPTEMD---IRS 233
           AENCQKS+IFFIA CPD+A VRSKMIYASSKDRFKREL GIQVELQAT+PTEMD   ++S
Sbjct: 70  AENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKS 129

Query: 234 RSN 242
           R N
Sbjct: 130 RVN 132


>ref|NP_851228.1| actin depolymerizing factor 4 [Arabidopsis thaliana]
           gi|17367311|sp|Q9ZSK3.2|ADF4_ARATH RecName:
           Full=Actin-depolymerizing factor 4; Short=ADF-4;
           Short=AtADF4 gi|9757910|dbj|BAB08357.1| actin
           depolymerizing factor 4 [Arabidopsis thaliana]
           gi|21536985|gb|AAM61326.1| actin depolymerizing factor
           4-like protein [Arabidopsis thaliana]
           gi|222423736|dbj|BAH19834.1| AT5G59890 [Arabidopsis
           thaliana] gi|332009864|gb|AED97247.1| actin
           depolymerizing factor 4 [Arabidopsis thaliana]
          Length = 139

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/63 (80%), Positives = 56/63 (88%), Gaps = 3/63 (4%)
 Frame = +3

Query: 63  AENCQKSRIFFIARCPDIALVRSKMIYASSKDRFKRELGGIQVELQATEPTEMD---IRS 233
           AENCQKS+IFFIA CPD+A VRSKMIYASSKDRFKREL GIQVELQAT+PTEMD   ++S
Sbjct: 77  AENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKS 136

Query: 234 RSN 242
           R N
Sbjct: 137 RVN 139


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