BLASTX nr result

ID: Bupleurum21_contig00031510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031510
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278428.2| PREDICTED: disease resistance protein At4g27...    87   5e-15
emb|CAN71755.1| hypothetical protein VITISV_005047 [Vitis vinifera]    81   4e-13
ref|XP_003633688.1| PREDICTED: uncharacterized protein LOC100852...    79   1e-12
emb|CBI35152.3| unnamed protein product [Vitis vinifera]               79   1e-12
emb|CAN72797.1| hypothetical protein VITISV_031250 [Vitis vinifera]    78   3e-12

>ref|XP_002278428.2| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 1144

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
 Frame = -3

Query: 1043 SFSKLKRLKVSECNKLKIVIPRGMFRRLQNLESLSIDCCAS---VIAEVGTYGSNTDVLP 873
            SF KL+ L V +C  L  + P  + + LQNLE + I CC     V    G       VLP
Sbjct: 841  SFRKLRVLTVEQCGGLSTLFPADLLQLLQNLEIVQITCCQEMQDVFQIEGILVGEEHVLP 900

Query: 872  LKALRAMELESLPCLTETKFNSREDSGTMTWYPNLEYLRIRYCNGLRNVFLPSTARELVH 693
            L +LR ++L++LP L        +  G      NLE + I  CN LRN+F PS A+ L  
Sbjct: 901  LSSLRELKLDTLPQLEHLW----KGFGAHLSLHNLEVIEIERCNRLRNLFQPSIAQSLFK 956

Query: 692  IKKMRIVGCKKMTEIIG-------VGQKEISAGITFPKMTDLELTRLPNLTSLWNQSKEH 534
            ++ ++IV C ++ +II        V   E    +  PK+  LE+     L SL++ S   
Sbjct: 957  LEYLKIVDCMELQQIIAEDGLEQEVSNVEDKKSLNLPKLKVLEVEDCKKLKSLFSVSSAQ 1016

Query: 533  SEYKVELPKLVNFKKL 486
            S  +++  K+    +L
Sbjct: 1017 SFLQLKQLKVSGSNEL 1032


>emb|CAN71755.1| hypothetical protein VITISV_005047 [Vitis vinifera]
          Length = 1517

 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
 Frame = -3

Query: 1043 SFSKLKRLKVSECNKLKIVIPRGMFRRLQNLESLSIDCCASVIAEVGTYGSNTDV---LP 873
            SFSKLKR+KV+ C +L  + P  M  RLQ+L  L  + C+S+       G+N +V   + 
Sbjct: 966  SFSKLKRVKVATCGELLNIFPSSMLNRLQSLRFLKAEDCSSLEEVFDVEGTNVNVKEGVT 1025

Query: 872  LKALRAMELESLPCLTETKFNSREDSGTMTWYPNLEYLRIRYCNGLRNVFLPSTARELVH 693
            +  L  + L SLP   E  +N  ED   +  + NL+ + I  C  L+N+F  S  R+LV 
Sbjct: 1026 VTQLSQLILRSLP-KVEKIWN--EDPHGILNFQNLQSITIDECQSLKNLFPASLVRDLVQ 1082

Query: 692  IKKMRIVGCKKMTEIIGVGQKEISAGITFPKMTDLELTRLPNLTSLW 552
            ++++ ++ C     +      +  A   FPK+T LEL+ L  L S +
Sbjct: 1083 LQELHVLCCGIEEIVAKDNGVDTQATFVFPKVTSLELSYLHQLRSFY 1129


>ref|XP_003633688.1| PREDICTED: uncharacterized protein LOC100852821 [Vitis vinifera]
          Length = 1781

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
 Frame = -3

Query: 1043 SFSKLKRLKVSECNKLKIVIPRGMFRRLQNLESLSIDCCASV--IAEVGTYGSNTDVLPL 870
            SF +L+ L V +   + +VIP  M +RL NLE L +  C+SV  + ++           L
Sbjct: 1522 SFPRLRVLDVYDYRDILVVIPSFMLQRLHNLEVLKVGRCSSVEEVFQLEGLDEENQAKRL 1581

Query: 869  KALRAMELESLPCLTET-KFNSREDSGTMTW--------------------YPNLEYLRI 753
              LR ++L+ LP LT   K NS+      +                     + NL  L +
Sbjct: 1582 GQLREIKLDDLPGLTHLWKENSKPGLDLQSLESLEVLDCKKLINLVPSSVSFQNLATLDV 1641

Query: 752  RYCNGLRNVFLPSTARELVHIKKMRIVGCKKMTEIIGVGQKEISAGITFPKMTDLELTRL 573
            + C  LR++  PS A+ LV +K ++I G   M E++     E +  ITF K+  +EL  L
Sbjct: 1642 QSCGSLRSLISPSVAKSLVKLKTLKICGSDMMEEVVANEGGEATDEITFYKLQHMELLYL 1701

Query: 572  PNLTSLWNQSKEHSEYKVELPKLVNFKKLNCDKL 471
            PNLTS          Y    P L       C K+
Sbjct: 1702 PNLTSF-----SSGGYIFSFPSLEQMLVKECPKM 1730



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 12/200 (6%)
 Frame = -3

Query: 1043 SFSKLKRLKVSECNKLKIVIPRGMFRRLQNLESLSIDCCASVIAEVGTYGSNTDVLPLKA 864
            SFSKL+++ +S C +L  + P  + +RLQ+LE L +D C+S+ A     G+N +V     
Sbjct: 1191 SFSKLEKVTISSCGQLLNIFPSSLLKRLQSLERLFVDDCSSLEAVFDVEGTNVNV----- 1245

Query: 863  LRAMELESLPCLTETKFNSREDSGTMTWYPNLEYLRIRYCNGLRNVFLPSTARELVHIKK 684
                +LE L            D G +   P L+ L                   L+ + K
Sbjct: 1246 ----DLEEL----------NVDDGHVELLPKLKELM------------------LIDLPK 1273

Query: 683  MR-IVGCKKMTEIIGVGQKEISAG-ITFPKMTDLELTRLPNLTSLWN------QSKEHSE 528
            +R I  C                G I FPK++D+ L  LPNLTS  +      Q   H++
Sbjct: 1274 LRHICNCGSSRNHFPSSMASAPVGNIIFPKLSDIFLNSLPNLTSFVSPGYHSLQRLHHAD 1333

Query: 527  YKVELP----KLVNFKKLNC 480
                 P    + V F  L+C
Sbjct: 1334 LDTPFPVVFDERVAFPSLDC 1353


>emb|CBI35152.3| unnamed protein product [Vitis vinifera]
          Length = 1711

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
 Frame = -3

Query: 1043 SFSKLKRLKVSECNKLKIVIPRGMFRRLQNLESLSIDCCASV--IAEVGTYGSNTDVLPL 870
            SF +L+ L V +   + +VIP  M +RL NLE L +  C+SV  + ++           L
Sbjct: 1452 SFPRLRVLDVYDYRDILVVIPSFMLQRLHNLEVLKVGRCSSVEEVFQLEGLDEENQAKRL 1511

Query: 869  KALRAMELESLPCLTET-KFNSREDSGTMTW--------------------YPNLEYLRI 753
              LR ++L+ LP LT   K NS+      +                     + NL  L +
Sbjct: 1512 GQLREIKLDDLPGLTHLWKENSKPGLDLQSLESLEVLDCKKLINLVPSSVSFQNLATLDV 1571

Query: 752  RYCNGLRNVFLPSTARELVHIKKMRIVGCKKMTEIIGVGQKEISAGITFPKMTDLELTRL 573
            + C  LR++  PS A+ LV +K ++I G   M E++     E +  ITF K+  +EL  L
Sbjct: 1572 QSCGSLRSLISPSVAKSLVKLKTLKICGSDMMEEVVANEGGEATDEITFYKLQHMELLYL 1631

Query: 572  PNLTSLWNQSKEHSEYKVELPKLVNFKKLNCDKL 471
            PNLTS          Y    P L       C K+
Sbjct: 1632 PNLTSF-----SSGGYIFSFPSLEQMLVKECPKM 1660



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 12/200 (6%)
 Frame = -3

Query: 1043 SFSKLKRLKVSECNKLKIVIPRGMFRRLQNLESLSIDCCASVIAEVGTYGSNTDVLPLKA 864
            SFSKL+++ +S C +L  + P  + +RLQ+LE L +D C+S+ A     G+N +V     
Sbjct: 1121 SFSKLEKVTISSCGQLLNIFPSSLLKRLQSLERLFVDDCSSLEAVFDVEGTNVNV----- 1175

Query: 863  LRAMELESLPCLTETKFNSREDSGTMTWYPNLEYLRIRYCNGLRNVFLPSTARELVHIKK 684
                +LE L            D G +   P L+ L                   L+ + K
Sbjct: 1176 ----DLEEL----------NVDDGHVELLPKLKELM------------------LIDLPK 1203

Query: 683  MR-IVGCKKMTEIIGVGQKEISAG-ITFPKMTDLELTRLPNLTSLWN------QSKEHSE 528
            +R I  C                G I FPK++D+ L  LPNLTS  +      Q   H++
Sbjct: 1204 LRHICNCGSSRNHFPSSMASAPVGNIIFPKLSDIFLNSLPNLTSFVSPGYHSLQRLHHAD 1263

Query: 527  YKVELP----KLVNFKKLNC 480
                 P    + V F  L+C
Sbjct: 1264 LDTPFPVVFDERVAFPSLDC 1283


>emb|CAN72797.1| hypothetical protein VITISV_031250 [Vitis vinifera]
          Length = 1271

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 6/198 (3%)
 Frame = -3

Query: 1046 VSFSKLKRLKVSECNKLKIVIPRGMFRRLQNLESLSIDCCASV-----IAEVGTYGSNTD 882
            VSFSKL+ L +++C+ + +VI   M + L NLE L +  C SV     +  + +   + D
Sbjct: 1025 VSFSKLRVLNITKCHGILVVISSNMVQILHNLERLEVTKCDSVNEVIQVERLSSEEFHVD 1084

Query: 881  VLPLKALRAMELESLPCLTETKFNSREDSGTMTWYPNLEYLRIRYCNGLRNVFLPSTARE 702
             LP   L  + LE LP L          SG   +  + E L I  C  L N+   S A+ 
Sbjct: 1085 TLP--RLTEIHLEDLPMLMHL-------SGLSRYLQSFETLEIVSCGSLINLVTLSMAKR 1135

Query: 701  LVHIKKMRIVGCKKMTEII-GVGQKEISAGITFPKMTDLELTRLPNLTSLWNQSKEHSEY 525
            LV +K + I  C  + EI+   G +  +  I F ++T LEL  LPNL S  +     + Y
Sbjct: 1136 LVQLKTLIIKECHMVKEIVANEGDEPPNDEIDFTRLTRLELDCLPNLKSFCS-----ARY 1190

Query: 524  KVELPKLVNFKKLNCDKL 471
                P L       C K+
Sbjct: 1191 AFRFPSLEEISVAACPKM 1208


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