BLASTX nr result

ID: Bupleurum21_contig00031501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031501
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517599.1| ubiquitin-protein ligase, putative [Ricinus ...   127   1e-27
ref|XP_003632755.1| PREDICTED: F-box/kelch-repeat protein At3g61...   124   1e-26
ref|XP_002304150.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_004152210.1| PREDICTED: protein UNUSUAL FLORAL ORGANS-lik...    94   2e-17
ref|XP_003529811.1| PREDICTED: F-box only protein 6-like [Glycin...    94   2e-17

>ref|XP_002517599.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223543231|gb|EEF44763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 367

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/114 (50%), Positives = 78/114 (68%), Gaps = 2/114 (1%)
 Frame = +3

Query: 6   GQLTLVGGCGNGGDVWIWELGADDEWNVVEKVGLELKARFLKGKGSWESTKCVGVEGAMC 185
           G+LTLVG  G GG+ ++W+L   D W ++EKV +EL  + L+GK SW S KCVG EGA+C
Sbjct: 250 GRLTLVGSTG-GGEAFVWKLNKGDIWCLIEKVPVELGVKLLRGKASWGSIKCVGGEGAIC 308

Query: 186 LYREFGLEMLVWNKVCSSHKWEWCWIKGCSS--SSSVPKFTIKGLLIHPDLSES 341
           LYR+ G  MLVW +V    KWEW W++GC S     V   +++GLLIHP+L+ S
Sbjct: 309 LYRDLGSGMLVWREVREKGKWEWLWVEGCCSINGKQVENISVRGLLIHPNLASS 362


>ref|XP_003632755.1| PREDICTED: F-box/kelch-repeat protein At3g61590-like [Vitis
           vinifera]
          Length = 369

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/115 (53%), Positives = 77/115 (66%), Gaps = 2/115 (1%)
 Frame = +3

Query: 3   DGQLTLVGGCGNGGDVWIWELGADDEWNVVEKVGLELKARFLKGKGSWESTKCVGVEGAM 182
           +G+ TLVGG  N G   IWELG  D W +VEK+ +EL  R L  KGSWESTKCVG +GA+
Sbjct: 252 NGRPTLVGGTCNEG-ACIWELGEGDTWGLVEKIPIELGMRLLGVKGSWESTKCVGSDGAL 310

Query: 183 CLYREFGLEMLVWNKVCSSHKWEWCWIKGCSS--SSSVPKFTIKGLLIHPDLSES 341
           CLYR+ G  M+VW +V    +WEW W++GC S     V    IKGLL+HP+L+ S
Sbjct: 311 CLYRDLGSGMVVWREV-EKGRWEWLWVEGCCSVGGKQVQNIPIKGLLLHPNLATS 364


>ref|XP_002304150.1| predicted protein [Populus trichocarpa] gi|222841582|gb|EEE79129.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/115 (47%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
 Frame = +3

Query: 3   DGQLTLVGGCGNGGDVWIWELGADDEWNVVEKVGLELKARFLKGKGSWESTKCVGVEGAM 182
           +G+LTLVGG  +GGD  +WEL     W + EK+ +EL  + L GK SW +TKCV  +GA+
Sbjct: 254 NGRLTLVGGT-SGGDACVWELDERHAWCLKEKMPVELTRKLLGGKASWATTKCVRGDGAI 312

Query: 183 CLYREFGLEMLVWNKVCSSHKWEWCWIKGCSS--SSSVPKFTIKGLLIHPDLSES 341
           CLYR+ G  M VW KV    +WEW W++GC S     V    IKG+LI P+L+ S
Sbjct: 313 CLYRDLGSGMAVWRKVGERGRWEWFWVEGCCSIKGKRVQNLPIKGVLIPPNLAPS 367


>ref|XP_004152210.1| PREDICTED: protein UNUSUAL FLORAL ORGANS-like [Cucumis sativus]
           gi|449484183|ref|XP_004156809.1| PREDICTED: protein
           UNUSUAL FLORAL ORGANS-like [Cucumis sativus]
          Length = 372

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
 Frame = +3

Query: 3   DGQLTLVGG-CGNGGDVWIWELGADDEWNVVEKVGLELKARFLKGK-GSWESTKCVGVEG 176
           +G+LT+VGG CG   D  +WE    D W +VEKV  EL  + + G  GSW ++KC     
Sbjct: 253 NGRLTIVGGVCGE--DACVWECRDGDVWVLVEKVPNELGRKLVGGSNGSWINSKCAWNNE 310

Query: 177 AMCLYREFGLEMLVWNKVCSSHKWEWCWIKGCSS--SSSVPKFTIKGLLIHPDLS 335
            MCLY+E G  M+VW +    + WEW WI GCSS     V    IKGLL+ P L+
Sbjct: 311 VMCLYKELGNGMVVWRERKEKNTWEWVWIDGCSSIRGKIVHNLPIKGLLLQPSLA 365


>ref|XP_003529811.1| PREDICTED: F-box only protein 6-like [Glycine max]
          Length = 369

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 53/117 (45%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
 Frame = +3

Query: 3   DGQLTLVGGCGNGGDVWIWELGADDEWNVVEKVGLELKARFLKGKGSWESTKCVGVEGAM 182
           +G L LVGG   GG   IWEL   D+W +V+KV LEL  R L GK    S KCVG E A+
Sbjct: 254 NGALGLVGGTC-GGTACIWELNEGDKWCLVDKVPLELGLRLLGGK----SVKCVGNEDAI 308

Query: 183 CLYREFGLEMLVWNKVCSS--HKWEWCWIKGC--SSSSSVPKFTIKGLLIHPDLSES 341
           CLYR+ G  M++  KV      +WEW W+ GC  +    V    I+G L+HP L+ S
Sbjct: 309 CLYRDLGYGMVLCKKVVGEIMGRWEWVWVDGCGYTKGKQVYNCPIRGALVHPSLASS 365


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