BLASTX nr result

ID: Bupleurum21_contig00031481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031481
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464690.1| hypothetical protein SORBIDRAFT_01g023381 [S...   204   8e-51
ref|XP_002441937.1| hypothetical protein SORBIDRAFT_08g005170 [S...   194   8e-48
gb|AFW65003.1| hypothetical protein ZEAMMB73_751466 [Zea mays]        163   2e-38
ref|XP_002467514.1| hypothetical protein SORBIDRAFT_01g029385 [S...   160   1e-37
ref|XP_002447508.1| hypothetical protein SORBIDRAFT_06g002262 [S...   158   4e-37

>ref|XP_002464690.1| hypothetical protein SORBIDRAFT_01g023381 [Sorghum bicolor]
           gi|241918544|gb|EER91688.1| hypothetical protein
           SORBIDRAFT_01g023381 [Sorghum bicolor]
          Length = 502

 Score =  204 bits (518), Expect = 8e-51
 Identities = 97/138 (70%), Positives = 114/138 (82%)
 Frame = +2

Query: 2   TPCAAHCLDLMLEDVTKLKEFNLAITHGRGITTFVYRHGRLLSAMREKTSGRDLVRTGAT 181
           TPCAAHCLDLMLED+ K+K F+  I   R +TTF+YRHGRLL AMREKT GRDLVR G T
Sbjct: 325 TPCAAHCLDLMLEDIGKMKVFSKPIARARQVTTFIYRHGRLLDAMREKTGGRDLVRPGVT 384

Query: 182 RFATAFLTLQSLYKNKDALRKLFGGEEWFHSKLANTIAGGKVHDVVLSTRFWNIVEDCIR 361
           RFATAFLTL+SL+ ++DAL+ LF  ++W  SKLA T AG KVHD +LST FWN VEDC+R
Sbjct: 385 RFATAFLTLRSLHTHRDALKFLFVSDDWTKSKLAKTEAGKKVHDTILSTEFWNSVEDCLR 444

Query: 362 ASQPLLVVLRIVDGDEKP 415
           ASQPL+V+LRIVDGDE+P
Sbjct: 445 ASQPLIVLLRIVDGDERP 462


>ref|XP_002441937.1| hypothetical protein SORBIDRAFT_08g005170 [Sorghum bicolor]
           gi|241942630|gb|EES15775.1| hypothetical protein
           SORBIDRAFT_08g005170 [Sorghum bicolor]
          Length = 535

 Score =  194 bits (492), Expect = 8e-48
 Identities = 94/138 (68%), Positives = 108/138 (78%)
 Frame = +2

Query: 2   TPCAAHCLDLMLEDVTKLKEFNLAITHGRGITTFVYRHGRLLSAMREKTSGRDLVRTGAT 181
           +PC AHCLDLMLED+  L EF   IT  R +TTF+YRHGR+LSAMREKT G DLVR  AT
Sbjct: 200 SPCVAHCLDLMLEDIGNLLEFKKPITRARCVTTFIYRHGRILSAMREKTGGADLVRPAAT 259

Query: 182 RFATAFLTLQSLYKNKDALRKLFGGEEWFHSKLANTIAGGKVHDVVLSTRFWNIVEDCIR 361
            FATAFLTL+SLYK+KDAL+ L   E W  +KL+ T  G  VHD+VLST+FWN VEDC+R
Sbjct: 260 HFATAFLTLKSLYKHKDALKYLMVSEAWTGNKLSKTKVGQDVHDIVLSTQFWNSVEDCLR 319

Query: 362 ASQPLLVVLRIVDGDEKP 415
           AS PLL+VLR VDGDEKP
Sbjct: 320 ASAPLLIVLRAVDGDEKP 337


>gb|AFW65003.1| hypothetical protein ZEAMMB73_751466 [Zea mays]
          Length = 541

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/126 (63%), Positives = 99/126 (78%)
 Frame = +2

Query: 38  EDVTKLKEFNLAITHGRGITTFVYRHGRLLSAMREKTSGRDLVRTGATRFATAFLTLQSL 217
           +D+ K+ EF   I+H R +TTF+YRH +LL A REK  G DLVR   TRFAT+FLTLQS+
Sbjct: 289 KDIGKIGEFKKCISHARQVTTFIYRHSKLLDATREKIGG-DLVRPAVTRFATSFLTLQSI 347

Query: 218 YKNKDALRKLFGGEEWFHSKLANTIAGGKVHDVVLSTRFWNIVEDCIRASQPLLVVLRIV 397
           YK+K ALR LF  ++W  SKL++T AG KV +++LST FWN V+DCIRASQPLL+VLRIV
Sbjct: 348 YKHKQALRCLFVSDDWTRSKLSSTEAGKKVTEILLSTNFWNSVQDCIRASQPLLIVLRIV 407

Query: 398 DGDEKP 415
           DGDEKP
Sbjct: 408 DGDEKP 413


>ref|XP_002467514.1| hypothetical protein SORBIDRAFT_01g029385 [Sorghum bicolor]
           gi|241921368|gb|EER94512.1| hypothetical protein
           SORBIDRAFT_01g029385 [Sorghum bicolor]
          Length = 277

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/119 (65%), Positives = 94/119 (78%)
 Frame = +2

Query: 59  EFNLAITHGRGITTFVYRHGRLLSAMREKTSGRDLVRTGATRFATAFLTLQSLYKNKDAL 238
           EF   I   + +TTF+YRHGR+LS MREKT G DLVR  ATRFAT+FLTL+SLYK++DAL
Sbjct: 1   EFKKPIARAKRVTTFIYRHGRILSLMREKT-GADLVRPAATRFATSFLTLKSLYKHRDAL 59

Query: 239 RKLFGGEEWFHSKLANTIAGGKVHDVVLSTRFWNIVEDCIRASQPLLVVLRIVDGDEKP 415
           + LF  EEW  +KLA T AG +VH+ VLS  FWN VEDC+RAS PLL+VLR+VDGDE+P
Sbjct: 60  KALFVSEEWMGNKLAKTAAGQEVHNTVLSVEFWNSVEDCLRASAPLLIVLRVVDGDERP 118


>ref|XP_002447508.1| hypothetical protein SORBIDRAFT_06g002262 [Sorghum bicolor]
           gi|241938691|gb|EES11836.1| hypothetical protein
           SORBIDRAFT_06g002262 [Sorghum bicolor]
          Length = 220

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/138 (54%), Positives = 102/138 (73%)
 Frame = +2

Query: 2   TPCAAHCLDLMLEDVTKLKEFNLAITHGRGITTFVYRHGRLLSAMREKTSGRDLVRTGAT 181
           TPCAAHCLDL+LED+ K+KEF+  I   + +T FVY+HGR+L  MR+K  G DLVR G T
Sbjct: 25  TPCAAHCLDLLLEDIGKIKEFSTCINKAKRVTRFVYKHGRVLDLMRDKIGG-DLVRPGVT 83

Query: 182 RFATAFLTLQSLYKNKDALRKLFGGEEWFHSKLANTIAGGKVHDVVLSTRFWNIVEDCIR 361
           RFAT+FLTL S++++K+ALR L   +EW +   + T  G +V +++LS  FW+ VE C++
Sbjct: 84  RFATSFLTLASMHRHKNALRSLVVCDEWHNLSFSVTQEGRRVENIILSAPFWSKVELCLK 143

Query: 362 ASQPLLVVLRIVDGDEKP 415
           ASQPLL+ +RI DGDE P
Sbjct: 144 ASQPLLIAMRIADGDETP 161


Top