BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031456
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi...   261   5e-68
emb|CBI24939.3| unnamed protein product [Vitis vinifera]              261   5e-68
ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|2...   238   8e-61
ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containi...   229   3e-58
ref|XP_002517779.1| pentatricopeptide repeat-containing protein,...   227   1e-57

>ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Vitis vinifera]
          Length = 538

 Score =  261 bits (668), Expect = 5e-68
 Identities = 128/198 (64%), Positives = 161/198 (81%), Gaps = 1/198 (0%)
 Frame = -3

Query: 595 WSSSFAMP-SRCSINCPRETINPLNPHIVVPNAAKKNTENSWHGLQKSSKKNLAHILRTE 419
           WSSS  +  + CS+   +ET    NP  +   A K+++ +S +GLQ+  KK+L+ ILRTE
Sbjct: 13  WSSSIPLTYTTCSLKVLKETKPTSNPPFLFVRAGKRSSGSSQNGLQRQPKKDLSRILRTE 72

Query: 418 AAILGIERKTDSRKYTNLWPKAVLEALDDAIREKRWQSALKIFGLLRKQHWYKPKSQTYT 239
           AAI GIERK +SRKY+ LWPKAVLEALD+AIRE R++SALKIFGLLRKQHWY+P+ QTYT
Sbjct: 73  AAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYESALKIFGLLRKQHWYEPRCQTYT 132

Query: 238 KLLVMLGKCRQPNQASLLFEIMLSEGVQPTIDVYSALLSAYGYSGLFDKAFEIIDDIKSF 59
           KLL+MLGKC+QP QASLLFE+MLSEG++PT+DVY+AL+SAYG+SG  DKAF  ++D+KS 
Sbjct: 133 KLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFCTVEDMKSV 192

Query: 58  PDCKLDVHTYSILINCCT 5
            DCK DV+TYSILI CCT
Sbjct: 193 SDCKPDVYTYSILIKCCT 210


>emb|CBI24939.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  261 bits (668), Expect = 5e-68
 Identities = 128/198 (64%), Positives = 161/198 (81%), Gaps = 1/198 (0%)
 Frame = -3

Query: 595 WSSSFAMP-SRCSINCPRETINPLNPHIVVPNAAKKNTENSWHGLQKSSKKNLAHILRTE 419
           WSSS  +  + CS+   +ET    NP  +   A K+++ +S +GLQ+  KK+L+ ILRTE
Sbjct: 13  WSSSIPLTYTTCSLKVLKETKPTSNPPFLFVRAGKRSSGSSQNGLQRQPKKDLSRILRTE 72

Query: 418 AAILGIERKTDSRKYTNLWPKAVLEALDDAIREKRWQSALKIFGLLRKQHWYKPKSQTYT 239
           AAI GIERK +SRKY+ LWPKAVLEALD+AIRE R++SALKIFGLLRKQHWY+P+ QTYT
Sbjct: 73  AAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYESALKIFGLLRKQHWYEPRCQTYT 132

Query: 238 KLLVMLGKCRQPNQASLLFEIMLSEGVQPTIDVYSALLSAYGYSGLFDKAFEIIDDIKSF 59
           KLL+MLGKC+QP QASLLFE+MLSEG++PT+DVY+AL+SAYG+SG  DKAF  ++D+KS 
Sbjct: 133 KLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFCTVEDMKSV 192

Query: 58  PDCKLDVHTYSILINCCT 5
            DCK DV+TYSILI CCT
Sbjct: 193 SDCKPDVYTYSILIKCCT 210


>ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|222849725|gb|EEE87272.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  238 bits (606), Expect = 8e-61
 Identities = 118/200 (59%), Positives = 152/200 (76%)
 Frame = -3

Query: 601 MCWSSSFAMPSRCSINCPRETINPLNPHIVVPNAAKKNTENSWHGLQKSSKKNLAHILRT 422
           M WS S + P   S N    +    +P  +   ++K   + +  GLQ+ SKK L+ ILRT
Sbjct: 1   MSWSLSISTPP--SKNLLTGSNGNQDPQFLTIQSSKWCPDPTSTGLQRQSKKELSRILRT 58

Query: 421 EAAILGIERKTDSRKYTNLWPKAVLEALDDAIREKRWQSALKIFGLLRKQHWYKPKSQTY 242
           EAAI  IE+K +S+KY NLWPKAVLEALDDAI+E +W+SALKIF LLRKQHWY+P+++TY
Sbjct: 59  EAAIKAIEQKANSKKYNNLWPKAVLEALDDAIKENQWESALKIFELLRKQHWYEPRTKTY 118

Query: 241 TKLLVMLGKCRQPNQASLLFEIMLSEGVQPTIDVYSALLSAYGYSGLFDKAFEIIDDIKS 62
           TKLL+MLGKCRQP + S LFE+MLS+G++PTIDVY+AL+SAYG SG  DKAF I+ ++K+
Sbjct: 119 TKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVYTALVSAYGKSGQLDKAFSIVVEMKA 178

Query: 61  FPDCKLDVHTYSILINCCTK 2
             +CK DV+TYSILINCC K
Sbjct: 179 ISECKPDVYTYSILINCCIK 198


>ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Cucumis sativus]
           gi|449514880|ref|XP_004164505.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g53170-like [Cucumis sativus]
          Length = 477

 Score =  229 bits (584), Expect = 3e-58
 Identities = 108/165 (65%), Positives = 135/165 (81%)
 Frame = -3

Query: 496 KKNTENSWHGLQKSSKKNLAHILRTEAAILGIERKTDSRKYTNLWPKAVLEALDDAIREK 317
           K+ +  S   LQ+  KK L+ ILR +AAI  IERK +S+KY NLWPKAVLEALD+AI+E 
Sbjct: 46  KRTSTQSSDALQRDPKKGLSRILRRDAAIKAIERKANSKKYNNLWPKAVLEALDEAIQEN 105

Query: 316 RWQSALKIFGLLRKQHWYKPKSQTYTKLLVMLGKCRQPNQASLLFEIMLSEGVQPTIDVY 137
            W++ALKIFGLLR+Q WY+P+ QTYTKLL++LGKC+QP QASLLFEIM SEG++P+IDVY
Sbjct: 106 LWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVY 165

Query: 136 SALLSAYGYSGLFDKAFEIIDDIKSFPDCKLDVHTYSILINCCTK 2
           +AL+SAYG SGL  KA   +D++KS  DCK DVHTYSILI+CCT+
Sbjct: 166 TALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTR 210


>ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543051|gb|EEF44586.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  227 bits (579), Expect = 1e-57
 Identities = 115/199 (57%), Positives = 149/199 (74%), Gaps = 1/199 (0%)
 Frame = -3

Query: 595 WSSSFAMPSRCS-INCPRETINPLNPHIVVPNAAKKNTENSWHGLQKSSKKNLAHILRTE 419
           WS S + P     I   +E     +P I+  +++  +++    G ++ +KK L+  LRT+
Sbjct: 13  WSYSISTPPTIHLIKVLKERNFHSDPPILGIHSSNLSSDLIPVGPKRHTKKELSRFLRTD 72

Query: 418 AAILGIERKTDSRKYTNLWPKAVLEALDDAIREKRWQSALKIFGLLRKQHWYKPKSQTYT 239
           AAI  IE+K DS KY  LWPKAVLEALDDAI+E+RW+SALKIF LLRKQHWY+P+ QTYT
Sbjct: 73  AAIKAIEQKADSSKYNRLWPKAVLEALDDAIKERRWKSALKIFELLRKQHWYEPRCQTYT 132

Query: 238 KLLVMLGKCRQPNQASLLFEIMLSEGVQPTIDVYSALLSAYGYSGLFDKAFEIIDDIKSF 59
           KLL+MLGKCRQP +A LLFE+M +EG++PTIDVY+AL+SAYG SGL  KAF  +D++KS 
Sbjct: 133 KLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAKAFSTVDEMKSV 192

Query: 58  PDCKLDVHTYSILINCCTK 2
            DCK DV+TYS+LIN CTK
Sbjct: 193 SDCKPDVYTYSVLINICTK 211