BLASTX nr result

ID: Bupleurum21_contig00031420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031420
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300673.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   152   2e-35
emb|CBI18897.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_002307759.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]   152   2e-35

>ref|XP_002300673.1| predicted protein [Populus trichocarpa] gi|222842399|gb|EEE79946.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  159 bits (401), Expect = 3e-37
 Identities = 74/95 (77%), Positives = 87/95 (91%), Gaps = 1/95 (1%)
 Frame = -3

Query: 309 EQDRGRPKRFDWSRSARTEKGVSAVCQVIAGRFYVDPPGLIDRLHSHLSPQFRIYGYKRV 130
           EQDRG PKR+DW+RSART+KGVSAV QV++GRFY+DPPGL++RLHS+LSPQFRI+GYKRV
Sbjct: 58  EQDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLHSNLSPQFRIFGYKRV 117

Query: 129 TTSFNAQTFCDRRRYVYLLPVFALDP-SYNDTECV 28
           T SFNA+ FCDRRRYVYL+PVFALDP S+ D E V
Sbjct: 118 TGSFNAKKFCDRRRYVYLIPVFALDPCSHRDRESV 152


>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
           vinifera]
          Length = 503

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/95 (74%), Positives = 85/95 (89%), Gaps = 1/95 (1%)
 Frame = -3

Query: 309 EQDRGRPKRFDWSRSARTEKGVSAVCQVIAGRFYVDPPGLIDRLHSHLSPQFRIYGYKRV 130
           EQDRG PKRFDW+RSART+KGVSAV QV++GRFY+DPPGL++RL+S+L PQ RI+G+KRV
Sbjct: 80  EQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRV 139

Query: 129 TTSFNAQTFCDRRRYVYLLPVFALDP-SYNDTECV 28
           T SFNA+ FCDRRRYVYL+PVFALDP S+ D E V
Sbjct: 140 TASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESV 174


>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/95 (74%), Positives = 85/95 (89%), Gaps = 1/95 (1%)
 Frame = -3

Query: 309 EQDRGRPKRFDWSRSARTEKGVSAVCQVIAGRFYVDPPGLIDRLHSHLSPQFRIYGYKRV 130
           EQDRG PKRFDW+RSART+KGVSAV QV++GRFY+DPPGL++RL+S+L PQ RI+G+KRV
Sbjct: 26  EQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRV 85

Query: 129 TTSFNAQTFCDRRRYVYLLPVFALDP-SYNDTECV 28
           T SFNA+ FCDRRRYVYL+PVFALDP S+ D E V
Sbjct: 86  TASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESV 120


>ref|XP_002307759.1| predicted protein [Populus trichocarpa] gi|222857208|gb|EEE94755.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/95 (74%), Positives = 85/95 (89%), Gaps = 1/95 (1%)
 Frame = -3

Query: 309 EQDRGRPKRFDWSRSARTEKGVSAVCQVIAGRFYVDPPGLIDRLHSHLSPQFRIYGYKRV 130
           E DRG PKR+DW+RSART+KGVSAV QV++GRFY+DPPGL++RLHS+LSPQ RI+GYKRV
Sbjct: 42  EHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRV 101

Query: 129 TTSFNAQTFCDRRRYVYLLPVFALDP-SYNDTECV 28
           T SFNA+ FCDRRRYVYL+PVFAL+P S+ D E V
Sbjct: 102 TGSFNAKKFCDRRRYVYLIPVFALNPCSHRDRESV 136


>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
          Length = 559

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/95 (74%), Positives = 85/95 (89%), Gaps = 1/95 (1%)
 Frame = -3

Query: 309 EQDRGRPKRFDWSRSARTEKGVSAVCQVIAGRFYVDPPGLIDRLHSHLSPQFRIYGYKRV 130
           EQDRG PKRFDW+RSART+KGVSAV QV++GRFY+DPPGL++RL+S+L PQ RI+G+KRV
Sbjct: 68  EQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRV 127

Query: 129 TTSFNAQTFCDRRRYVYLLPVFALDP-SYNDTECV 28
           T SFNA+ FCDRRRYVYL+PVFALDP S+ D E V
Sbjct: 128 TASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESV 162


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