BLASTX nr result

ID: Bupleurum21_contig00031389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031389
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochond...   227   5e-57
emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]   220   5e-55
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]   214   3e-53
ref|XP_002520658.1| conserved hypothetical protein [Ricinus comm...   214   3e-53
ref|XP_002533066.1| conserved hypothetical protein [Ricinus comm...   212   2e-52

>ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera]
          Length = 865

 Score =  227 bits (578), Expect = 5e-57
 Identities = 118/309 (38%), Positives = 188/309 (60%)
 Frame = -3

Query: 1040 MNNISLEDKDDGALVMGSDELLGNVQSVQGFDAKFCVVARFLSEGRIDFPAMQQAMAALW 861
            + N+SL   ++  LV+ + E   N  + Q FD   C++ RFL++  I+F AM+  +A++W
Sbjct: 462  LENLSLLVDEEEELVLDTGE---NGSTTQSFD--LCLIGRFLTDRMINFNAMKHCLASVW 516

Query: 860  KPGRGVYIRELESNLFLFQFYHEIDVKRVMEGCPWSFNRRALLMRRLKVGENPRSVELNT 681
            +  +G+ I+E+   LFLFQF+H +D+KRV+EG PW+F+   L++  LK G  P ++ L  
Sbjct: 517  RLEKGICIKEINKQLFLFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPLFH 576

Query: 680  MDLWVQIYDLKIGFMTERIVAEVGNNIGKFVASCPSNFTGVWREYFRVRVTIDVTKPLKR 501
            +  W+Q+YD+ +G M+  +  ++ N IGKFV    +N  G+WR + R+RV +DV +PLK 
Sbjct: 577  VLFWIQVYDILVGSMSLNVGKQLDNFIGKFVDYNINNNAGLWRNFMRIRVLLDVRQPLKM 636

Query: 500  RMKIKKAEGEWYWISFKYENVPMFCFICGILGHSEKFCSRLFETPEADIIKPYGAWMRAP 321
              +I+K +GEW  + FKYE +  FC++CG+LGHSEKFC++LF   + DI + +   +R P
Sbjct: 637  WKRIRKPQGEWSLVHFKYERLSTFCYLCGMLGHSEKFCNKLFLITDGDIKREWSTDLRVP 696

Query: 320  FRRQVKPIGAKWLRNGMDRADRNVKEAETQNQHGGSSSSYDPQFAPQNQGSVERGGISGD 141
             RR  +  G +WLR  M+ +  +  ++E  N   G  S Y   F+ Q   S E GGI   
Sbjct: 697  VRRGSEYGGERWLRETMENS-THADDSEYGNIAMG--SGYGSDFSIQEVISSESGGI--- 750

Query: 140  KDLQNKSNV 114
            KD Q  + +
Sbjct: 751  KDFQTANRL 759


>emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]
          Length = 626

 Score =  220 bits (561), Expect = 5e-55
 Identities = 115/309 (37%), Positives = 184/309 (59%)
 Frame = -3

Query: 1040 MNNISLEDKDDGALVMGSDELLGNVQSVQGFDAKFCVVARFLSEGRIDFPAMQQAMAALW 861
            + N+SL   ++  LV+ + E   N  +   FD   C++ RFL++  I+F AM+  +A++W
Sbjct: 5    LENLSLLVDEEEELVLDTGE---NGSTTXSFD--LCLIGRFLTDRMINFNAMKHCLASVW 59

Query: 860  KPGRGVYIRELESNLFLFQFYHEIDVKRVMEGCPWSFNRRALLMRRLKVGENPRSVELNT 681
            +  +G+ I+E+   LF FQF+H +D+KRV+EG PW+F+   L++  LK G  P ++ L  
Sbjct: 60   RLEKGICIKEINKQLFXFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPLFH 119

Query: 680  MDLWVQIYDLKIGFMTERIVAEVGNNIGKFVASCPSNFTGVWREYFRVRVTIDVTKPLKR 501
            +  W+Q+YD+ +G M+  +  ++ N IGKFV    +N  G+WR + R+RV +D  +PLK 
Sbjct: 120  VLFWIQVYDILVGSMSLNVGKQLDNFIGKFVDYNINNNAGLWRNFMRIRVLLDXRQPLKM 179

Query: 500  RMKIKKAEGEWYWISFKYENVPMFCFICGILGHSEKFCSRLFETPEADIIKPYGAWMRAP 321
              +I+K +GEW  + FKYE +  FC++CG+LGHSEKFC +LF   + DI + +   +R P
Sbjct: 180  WKRIRKPQGEWSLVHFKYERLSTFCYLCGMLGHSEKFCDKLFLITDGDIKREWSTDLRVP 239

Query: 320  FRRQVKPIGAKWLRNGMDRADRNVKEAETQNQHGGSSSSYDPQFAPQNQGSVERGGISGD 141
             RR  +  G +WLR  M+ +  +  ++E  N   G  S Y   F+ Q   S E GGI   
Sbjct: 240  VRRGSEYGGERWLRETMENS-THADDSEYGNIAMG--SGYGSDFSIQEVISSESGGI--- 293

Query: 140  KDLQNKSNV 114
            KD Q  + +
Sbjct: 294  KDFQTANRL 302


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score =  214 bits (546), Expect = 3e-53
 Identities = 104/260 (40%), Positives = 159/260 (61%), Gaps = 2/260 (0%)
 Frame = -3

Query: 887 MQQAMAALWKPGRGVYIRELESNLFLFQFYHEIDVKRVMEGCPWSFNRRALLMRRLKVGE 708
           M+  + ++W+PG+G+ I+E+   LFLFQF+H +D+KRV+EG PW+F+   L++  LK G 
Sbjct: 1   MKHRLTSVWRPGKGICIKEINKQLFLFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGA 60

Query: 707 NPRSVELNTMDLWVQIYDLKIGFMTERIVAEVGNNIGKFVASCPSNFTGVWREYFRVRVT 528
            P ++ L  +  W+Q+YD+ +G M+  +  ++GN IGKFV    +N  G+WR + R+RV 
Sbjct: 61  IPTAIPLFHVLFWIQVYDIPVGSMSLNVGKQLGNFIGKFVDYDINNNAGLWRNFMRIRVL 120

Query: 527 IDVTKPLKRRMKIKKAEGEWYWISFKYENVPMFCFICGILGHSEKFCSRLFETPEADIIK 348
           +DV +PLKR  KI+K +GEW  + FKYE +  FC++CG+LGHSEKFC +LF   + DI +
Sbjct: 121 LDVRQPLKRWKKIRKPQGEWSLVHFKYERLSTFCYLCGMLGHSEKFCDKLFSITDGDIKR 180

Query: 347 PYGAWMRAPFRRQVKPIGAKWLRNGMDRADRNVKEAETQNQHGG--SSSSYDPQFAPQNQ 174
            +   +R P RR  +  G +WLR  M+ +       E  + +G     S Y   F+ Q  
Sbjct: 181 EWSPDLRVPVRRGSEYGGERWLRETMENSTH-----EDDSVYGNITMGSGYGSDFSIQGV 235

Query: 173 GSVERGGISGDKDLQNKSNV 114
            S + GGI   KD Q  S +
Sbjct: 236 ISSDSGGI---KDFQTTSRL 252


>ref|XP_002520658.1| conserved hypothetical protein [Ricinus communis]
            gi|223540043|gb|EEF41620.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 250

 Score =  214 bits (545), Expect = 3e-53
 Identities = 108/234 (46%), Positives = 146/234 (62%), Gaps = 8/234 (3%)
 Frame = -3

Query: 1049 VDDMNNISLEDKDDGALVMGSDELLGNVQSVQGFDAKF--CVVARFLSEGRIDFPAMQQA 876
            VD    + L +     LV+  +E     +   G D  F  C+V+R L++  I+F AM+  
Sbjct: 3    VDQEKQMELNNDGLAGLVLEEEE-----EDTTGLDEDFQWCLVSRVLADKMINFQAMRNT 57

Query: 875  MAALWKPGRGVYIRELESN------LFLFQFYHEIDVKRVMEGCPWSFNRRALLMRRLKV 714
            MA LW+P +GV I+EL  N       +LFQF+HE+DVKRV  G PW+FN   +L+ RLK 
Sbjct: 58   MAMLWRPLQGVCIKELSDNGERKEQRYLFQFFHEVDVKRVENGGPWTFNNYHILLHRLKE 117

Query: 713  GENPRSVELNTMDLWVQIYDLKIGFMTERIVAEVGNNIGKFVASCPSNFTGVWREYFRVR 534
             ENP  VEL   D W+Q+Y L IGF +E++V  +GN +G+++ S  +NF G WREY R+R
Sbjct: 118  KENPHEVELKWTDFWIQVYRLPIGFRSEKVVKNIGNYVGEYLESDLNNFDGTWREYIRLR 177

Query: 533  VTIDVTKPLKRRMKIKKAEGEWYWISFKYENVPMFCFICGILGHSEKFCSRLFE 372
            V +D TKPL   MKIKK  GE   I FKYE + +FCFICG  GHS+KFC ++ E
Sbjct: 178  VRVDSTKPLLANMKIKKVGGESSAIDFKYERLGIFCFICGYRGHSDKFCRKILE 231


>ref|XP_002533066.1| conserved hypothetical protein [Ricinus communis]
            gi|223527130|gb|EEF29305.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 403

 Score =  212 bits (539), Expect = 2e-52
 Identities = 124/350 (35%), Positives = 193/350 (55%), Gaps = 17/350 (4%)
 Frame = -3

Query: 1040 MNNISLEDKDDGALVMGSDELLGNV-----QSVQGFDAKF--CVVARFLSEGRIDFPAMQ 882
            +++ S+E   +  + + +D L+G V     +   G D  F  C+V R L++  I+F AM+
Sbjct: 2    VSSSSIEVDQEKQMELNNDGLVGLVLEEEEEDTMGLDKDFQWCLVDRVLADKMINFQAMR 61

Query: 881  QAMAALWKPGRGVYIRELESN------LFLFQFYHEIDVKRVMEGCPWSFNRRALLMRRL 720
              +A LW+P +GV I+EL  N       +LFQF+H +DVKR+  G PW+FN   +L+ RL
Sbjct: 62   NTIAMLWRPLQGVCIKELSDNGEREEQRYLFQFFHGVDVKRIENGGPWTFNNYHILLHRL 121

Query: 719  KVGENPRSVELNTMDLWVQIYDLKIGFMTERIVAEVGNNIGKFVASCPSNFTGVWREYFR 540
            K  ENP  VEL   +  +Q+Y L IGF  E++   +GN +G+++ S  +NF G WREY R
Sbjct: 122  KEKENPHKVELKWTNFLIQVYHLPIGFWREKVAKSIGNYVGEYLESDLNNFHGTWREYIR 181

Query: 539  VRVTIDVTKPLKRRMKIKKAEGEWYWISFKYENVPMFCFICGILGHSEKFCSRLFETPEA 360
            +RV +D  KPL   MKIKK  GEW  I FKYE + +F FICG +GH ++FC ++ E P  
Sbjct: 182  LRVRVDSAKPLLANMKIKKVGGEWSAIDFKYERLSIFYFICGHIGHLDRFCRKVLENP-- 239

Query: 359  DIIKPYGAWMRAPFRRQVK-PIGAKWLRNGMDRADRNVKEAETQNQHGGSSSSYDPQFAP 183
            D+ +     +RA  +R +    G +WLR+G       V     + +      +       
Sbjct: 240  DVERLLSKDIRAALKRTMAGSAGERWLRDGRSSKSGQVWRNPLEFESSVIQGTVKEVARS 299

Query: 182  QNQGSVE-RGGISGDKDLQNKSNVQNTSATITLIN--KSKERSINY*DKK 42
            + QG  + RGG  G +++ + SN      +++ +N   +KE  I + DK+
Sbjct: 300  KEQGRKDYRGG--GGENIGSNSNSNPVDISLSNLNDTSNKEGIIIHDDKR 347


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