BLASTX nr result

ID: Bupleurum21_contig00031385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031385
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279490.2| PREDICTED: translation initiation factor IF-...   157   2e-36
ref|XP_004149759.1| PREDICTED: translation initiation factor IF-...   136   4e-30
ref|XP_003554592.1| PREDICTED: translation initiation factor IF-...   114   1e-23
ref|XP_002872554.1| hypothetical protein ARALYDRAFT_489954 [Arab...   109   4e-22
ref|NP_192854.2| translation initiation factor IF-2 [Arabidopsis...   109   5e-22

>ref|XP_002279490.2| PREDICTED: translation initiation factor IF-2-like [Vitis vinifera]
           gi|296089697|emb|CBI39516.3| unnamed protein product
           [Vitis vinifera]
          Length = 725

 Score =  157 bits (396), Expect = 2e-36
 Identities = 84/165 (50%), Positives = 107/165 (64%), Gaps = 4/165 (2%)
 Frame = +3

Query: 159 MAWREVGKKGIRANLIKVLTATPSRHA----LTATTRVTTKSASGFVGCFQEFPIKSALC 326
           MAWREVGKK I ANL K L +T SR       T       KS S  +     F    +  
Sbjct: 1   MAWREVGKKSICANLTKALASTKSRDVPDPLSTPILEDALKSISSSIKHVPVFSASKSSL 60

Query: 327 GAEECKCIASRSLMRFFHSSPELFAKKGNDDSLGLKAPRKGKFKKRSTSAQPPVEAPYVP 506
           GA++C+ + +R L R FH+SP L A++ +D+  GLK P++ K+ KR +  QPPVEAPYV 
Sbjct: 61  GADKCQILPNRPLTRRFHASPGLLARRRSDEPFGLKTPKREKYVKRESKMQPPVEAPYVH 120

Query: 507 PRLKRASKSLPDKTIEIFEGMTIVELAKRSGESISALQNILINVG 641
           P+ KR +KSLPD+TI+IFEGMTI ELAK + ESIS LQ IL+NVG
Sbjct: 121 PKPKRTTKSLPDRTIDIFEGMTIGELAKHTNESISTLQEILVNVG 165


>ref|XP_004149759.1| PREDICTED: translation initiation factor IF-2-like [Cucumis
           sativus]
          Length = 724

 Score =  136 bits (342), Expect = 4e-30
 Identities = 80/165 (48%), Positives = 99/165 (60%), Gaps = 4/165 (2%)
 Frame = +3

Query: 159 MAWREVGKKGIRANLIKVLTATPSRHALT----ATTRVTTKSASGFVGCFQEFPIKSALC 326
           MAWRE+GKKG+ A L +  T +  RH +      T  V  K          + P  SA  
Sbjct: 1   MAWRELGKKGMHAGLRRTFTCS-RRHIVRPNFLTTDEVVIKLIPASSRFIPDVPCGSAYH 59

Query: 327 GAEECKCIASRSLMRFFHSSPELFAKKGNDDSLGLKAPRKGKFKKRSTSAQPPVEAPYVP 506
           G++        +  R FHSS EL A +G+D   GLK  +K KF ++    QPPVEAPYVP
Sbjct: 60  GSDFYVASTIEAPRRCFHSSAELLAGRGHDKEFGLKTQKKEKFVRKDGRNQPPVEAPYVP 119

Query: 507 PRLKRASKSLPDKTIEIFEGMTIVELAKRSGESISALQNILINVG 641
           P+ K +  S+ DKTIEIF+GMTIVELAKRSGESIS LQ+IL NVG
Sbjct: 120 PKPKHSIGSVSDKTIEIFDGMTIVELAKRSGESISRLQDILTNVG 164


>ref|XP_003554592.1| PREDICTED: translation initiation factor IF-2-like [Glycine max]
          Length = 718

 Score =  114 bits (286), Expect = 1e-23
 Identities = 75/167 (44%), Positives = 102/167 (61%), Gaps = 6/167 (3%)
 Frame = +3

Query: 159 MAWREVGKKGIRANLIKVLTATPSRHALTAT--TRVTTKSASGFVGCFQEFPIKS----A 320
           MAWRE+GKK I  N  + LT TP R+A  +   +  T +S      C  +F  +S    A
Sbjct: 1   MAWRELGKKRIYMNFTRALTTTPFRYAAGSNFASIFTVQSVCASARCVPDFTNQSSQGVA 60

Query: 321 LCGAEECKCIASRSLMRFFHSSPELFAKKGNDDSLGLKAPRKGKFKKRSTSAQPPVEAPY 500
            CG E  +C      +R FH+S +++A+  +D  LGL+ P++  + KR    Q PV APY
Sbjct: 61  GCGRETKECE-----IRCFHASSQVWAR--SDGPLGLQTPKR-VYVKRGGRNQLPVGAPY 112

Query: 501 VPPRLKRASKSLPDKTIEIFEGMTIVELAKRSGESISALQNILINVG 641
               +  A+KS PDKTIEIFEGMT+VELAKR+G S+S+LQ+IL NVG
Sbjct: 113 ACRNVP-ATKSNPDKTIEIFEGMTLVELAKRTGRSVSSLQDILTNVG 158


>ref|XP_002872554.1| hypothetical protein ARALYDRAFT_489954 [Arabidopsis lyrata subsp.
           lyrata] gi|297318391|gb|EFH48813.1| hypothetical protein
           ARALYDRAFT_489954 [Arabidopsis lyrata subsp. lyrata]
          Length = 746

 Score =  109 bits (273), Expect = 4e-22
 Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 9/153 (5%)
 Frame = +3

Query: 210 VLTATPSRHALTATTRVTTKSASGFVGCFQEFPIKSALCGAEECKCIASRSLMRFFHSSP 389
           V+ +T  + + T + R +   +  F      F   S    +   +   S + +R+FH+S 
Sbjct: 29  VVASTERQISSTVSKRASESVSFSFARYINGFGFSSLSNWSRSHESFPSGTSIRYFHASR 88

Query: 390 ELFAKKGNDDSLGLK--------APRKGKFKKRST-SAQPPVEAPYVPPRLKRASKSLPD 542
           E  AK+  D    L            KGKF KR   S +PPVEAPYVPPRLKR +K LP+
Sbjct: 89  ETLAKRKEDADRLLSHRERKKQTVKTKGKFSKREKKSDKPPVEAPYVPPRLKRLAKGLPE 148

Query: 543 KTIEIFEGMTIVELAKRSGESISALQNILINVG 641
           KT++IFEGMT++EL++R+GES++ LQ+ILINVG
Sbjct: 149 KTVDIFEGMTLLELSRRTGESVAVLQSILINVG 181


>ref|NP_192854.2| translation initiation factor IF-2 [Arabidopsis thaliana]
           gi|51536512|gb|AAU05494.1| At4g11160 [Arabidopsis
           thaliana] gi|51969726|dbj|BAD43555.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|51970152|dbj|BAD43768.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|51970248|dbj|BAD43816.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|51970442|dbj|BAD43913.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|53850507|gb|AAU95430.1| At4g11160
           [Arabidopsis thaliana] gi|62318855|dbj|BAD93919.1|
           translation initiation factor IF-2 like protein
           [Arabidopsis thaliana] gi|62319537|dbj|BAD94965.1|
           translation initiation factor IF-2 like protein
           [Arabidopsis thaliana] gi|332657579|gb|AEE82979.1|
           translation initiation factor IF-2 [Arabidopsis
           thaliana]
          Length = 743

 Score =  109 bits (272), Expect = 5e-22
 Identities = 63/156 (40%), Positives = 89/156 (57%), Gaps = 9/156 (5%)
 Frame = +3

Query: 201 LIKVLTATPSRHALTATTRVTTKSASGFVGCFQEFPIKSALCGAEECKCIASRSLMRFFH 380
           L +V+ +T  + + T   R +   +  F      F   S    +   +   + + +R+FH
Sbjct: 23  LPRVVASTERQISSTVLKRASESVSFSFAPYINGFGFSSLSNWSRSYESFPTETSIRYFH 82

Query: 381 SSPELFAKKGNDDSLGLK--------APRKGKFKKRSTSA-QPPVEAPYVPPRLKRASKS 533
           +S E  AK+  D    L            KGKF KR     +PPVEAPYVPPRLKR +K 
Sbjct: 83  ASRETLAKRKEDADRLLSHRERKKQTVKTKGKFSKREKKTDKPPVEAPYVPPRLKRLAKG 142

Query: 534 LPDKTIEIFEGMTIVELAKRSGESISALQNILINVG 641
           LP KT++IFEGMT++EL+KR+GES++ LQ+ILINVG
Sbjct: 143 LPGKTVDIFEGMTLLELSKRTGESVAVLQSILINVG 178


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