BLASTX nr result

ID: Bupleurum21_contig00031370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031370
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...   128   6e-28
ref|XP_002531766.1| transcription factor, putative [Ricinus comm...   125   5e-27
gb|AFK33347.1| unknown [Medicago truncatula]                          122   4e-26
gb|AFK40606.1| unknown [Medicago truncatula]                          121   7e-26
ref|XP_003598285.1| AT-rich interactive domain-containing protei...   121   7e-26

>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
           gi|296090037|emb|CBI39856.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  128 bits (321), Expect = 6e-28
 Identities = 64/114 (56%), Positives = 83/114 (72%), Gaps = 2/114 (1%)
 Frame = -3

Query: 424 SSSCPFPDAA--YNEIVQDSVLFFQKLYNFHASFGSANLKIPTIKGSTLDLHRLFVEVTS 251
           S+  P+P+AA  Y E+VQ + LF+Q L +FH SFG+    +PT  G  LDLHRLFVEVTS
Sbjct: 35  SAHRPYPEAAAQYQEVVQSADLFWQTLKDFHRSFGT-KFMVPTTGGKALDLHRLFVEVTS 93

Query: 250 RGGFEKVVADRKWKEICQAFKYPSTMTSAPHNIKKQYQLLLCEFEQVYYFRKRT 89
           RGG EKV+ DRKWKE+   FK+P+T+TSA   ++K Y  LL  +EQVYYFRK++
Sbjct: 94  RGGLEKVIRDRKWKEVTTVFKFPTTITSASFVLRKYYLSLLHHYEQVYYFRKQS 147


>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/109 (56%), Positives = 77/109 (70%)
 Frame = -3

Query: 418 SCPFPDAAYNEIVQDSVLFFQKLYNFHASFGSANLKIPTIKGSTLDLHRLFVEVTSRGGF 239
           S P P A + ++VQ S LF++KL +FH SFG+    +PT+ G  LDLH LFVEVTSRGG 
Sbjct: 29  SYPSPTAQFEDVVQSSDLFWEKLKSFHKSFGT-KFMVPTVGGKALDLHHLFVEVTSRGGL 87

Query: 238 EKVVADRKWKEICQAFKYPSTMTSAPHNIKKQYQLLLCEFEQVYYFRKR 92
           EKVV DRKWKE+  AF +PST+TSA   ++K Y  LL  FEQVY F K+
Sbjct: 88  EKVVRDRKWKEVIAAFNFPSTITSASFVLRKYYLSLLYHFEQVYQFHKQ 136


>gb|AFK33347.1| unknown [Medicago truncatula]
          Length = 185

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/107 (57%), Positives = 76/107 (71%)
 Frame = -3

Query: 412 PFPDAAYNEIVQDSVLFFQKLYNFHASFGSANLKIPTIKGSTLDLHRLFVEVTSRGGFEK 233
           P P A Y+++V+DS LF QKL +FH S G+  LKIPTI G +LDLH LFVEVTSRGG EK
Sbjct: 30  PPPTAPYSDLVRDSNLFQQKLQSFHDSLGT-KLKIPTIGGKSLDLHHLFVEVTSRGGIEK 88

Query: 232 VVADRKWKEICQAFKYPSTMTSAPHNIKKQYQLLLCEFEQVYYFRKR 92
           V+ DRKWKE+  +F +  T+TS    ++K Y  LL  FEQ YYF K+
Sbjct: 89  VIVDRKWKEVIMSFNFRDTITSGSFMVRKTYLSLLYHFEQAYYFCKQ 135


>gb|AFK40606.1| unknown [Medicago truncatula]
          Length = 234

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/107 (57%), Positives = 75/107 (70%)
 Frame = -3

Query: 412 PFPDAAYNEIVQDSVLFFQKLYNFHASFGSANLKIPTIKGSTLDLHRLFVEVTSRGGFEK 233
           P P A Y+++V+DS LF QKL +FH S G+  LKIPTI G  LDLH LFVEVTSRGG EK
Sbjct: 30  PPPTAPYSDLVRDSNLFQQKLQSFHDSLGT-KLKIPTIGGKPLDLHHLFVEVTSRGGIEK 88

Query: 232 VVADRKWKEICQAFKYPSTMTSAPHNIKKQYQLLLCEFEQVYYFRKR 92
           V+ DRKWKE+  +F +  T+TS    ++K Y  LL  FEQ YYF K+
Sbjct: 89  VIVDRKWKEVIMSFNFRDTITSGSFMVRKTYLSLLYHFEQAYYFCKQ 135


>ref|XP_003598285.1| AT-rich interactive domain-containing protein [Medicago truncatula]
           gi|355487333|gb|AES68536.1| AT-rich interactive
           domain-containing protein [Medicago truncatula]
          Length = 274

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/107 (57%), Positives = 75/107 (70%)
 Frame = -3

Query: 412 PFPDAAYNEIVQDSVLFFQKLYNFHASFGSANLKIPTIKGSTLDLHRLFVEVTSRGGFEK 233
           P P A Y+++V+DS LF QKL +FH S G+  LKIPTI G  LDLH LFVEVTSRGG EK
Sbjct: 30  PPPTAPYSDLVRDSNLFQQKLQSFHDSLGT-KLKIPTIGGKPLDLHHLFVEVTSRGGIEK 88

Query: 232 VVADRKWKEICQAFKYPSTMTSAPHNIKKQYQLLLCEFEQVYYFRKR 92
           V+ DRKWKE+  +F +  T+TS    ++K Y  LL  FEQ YYF K+
Sbjct: 89  VIVDRKWKEVIMSFNFRDTITSGSFMVRKTYLSLLYHFEQAYYFCKQ 135


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