BLASTX nr result

ID: Bupleurum21_contig00031352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031352
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47985.1| unknown [Lotus japonicus]                               49   4e-06
ref|NP_001235921.1| uncharacterized protein LOC100305731 [Glycin...    48   6e-06
gb|ABQ23584.1| putative histone [Medicago truncatula]                  48   6e-06
ref|XP_003606924.1| Histone H2B [Medicago truncatula] gi|3555079...    47   8e-06
ref|XP_003539691.1| PREDICTED: probable histone H2B.1-like isofo...    47   8e-06

>gb|AFK47985.1| unknown [Lotus japonicus]
          Length = 139

 Score = 48.5 bits (114), Expect(2) = 4e-06
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = -3

Query: 129 ASGADKKKRNKKSVETLKIYIFRALKQIH 43
           A+G++KKKR KKSVET KIYIF+ LKQ+H
Sbjct: 36  ATGSEKKKRTKKSVETYKIYIFKVLKQVH 64



 Score = 26.9 bits (58), Expect(2) = 4e-06
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 44  ISSKAMWVMNSFIN 3
           ISSKAM +MNSFIN
Sbjct: 69  ISSKAMGIMNSFIN 82


>ref|NP_001235921.1| uncharacterized protein LOC100305731 [Glycine max]
           gi|255626455|gb|ACU13572.1| unknown [Glycine max]
          Length = 137

 Score = 47.8 bits (112), Expect(2) = 6e-06
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = -3

Query: 129 ASGADKKKRNKKSVETLKIYIFRALKQIH 43
           ASG  KKKR KKSVET KIYIF+ LKQ+H
Sbjct: 34  ASGEKKKKRTKKSVETYKIYIFKVLKQVH 62



 Score = 26.9 bits (58), Expect(2) = 6e-06
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 44  ISSKAMWVMNSFIN 3
           ISSKAM +MNSFIN
Sbjct: 67  ISSKAMGIMNSFIN 80


>gb|ABQ23584.1| putative histone [Medicago truncatula]
          Length = 137

 Score = 47.8 bits (112), Expect(2) = 6e-06
 Identities = 24/30 (80%), Positives = 26/30 (86%), Gaps = 1/30 (3%)
 Frame = -3

Query: 129 ASGADKKK-RNKKSVETLKIYIFRALKQIH 43
           AS ADKKK RNKKSVET KIYIF+ LKQ+H
Sbjct: 33  ASSADKKKKRNKKSVETYKIYIFKVLKQVH 62



 Score = 26.9 bits (58), Expect(2) = 6e-06
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 44  ISSKAMWVMNSFIN 3
           ISSKAM +MNSFIN
Sbjct: 67  ISSKAMGIMNSFIN 80


>ref|XP_003606924.1| Histone H2B [Medicago truncatula] gi|355507979|gb|AES89121.1|
           Histone H2B [Medicago truncatula]
          Length = 290

 Score = 47.4 bits (111), Expect(2) = 8e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = -3

Query: 132 TASGADKKKRNKKSVETLKIYIFRALKQIH 43
           +A+G  KKKR+KKSVET KIYIF+ LKQ+H
Sbjct: 44  SAAGEKKKKRSKKSVETYKIYIFKVLKQVH 73



 Score = 47.4 bits (111), Expect(2) = 8e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = -3

Query: 132 TASGADKKKRNKKSVETLKIYIFRALKQIH 43
           +A+G  KKKR+KKSVET KIYIF+ LKQ+H
Sbjct: 186 SAAGEKKKKRSKKSVETYKIYIFKVLKQVH 215



 Score = 26.9 bits (58), Expect(2) = 8e-06
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 44  ISSKAMWVMNSFIN 3
           ISSKAM +MNSFIN
Sbjct: 78  ISSKAMGIMNSFIN 91



 Score = 26.9 bits (58), Expect(2) = 8e-06
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 44  ISSKAMWVMNSFIN 3
           ISSKAM +MNSFIN
Sbjct: 220 ISSKAMGIMNSFIN 233


>ref|XP_003539691.1| PREDICTED: probable histone H2B.1-like isoform 1 [Glycine max]
           gi|356542475|ref|XP_003539692.1| PREDICTED: probable
           histone H2B.1-like isoform 2 [Glycine max]
          Length = 149

 Score = 47.4 bits (111), Expect(2) = 8e-06
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = -3

Query: 123 GADKKKRNKKSVETLKIYIFRALKQIH 43
           G  KKKRNKKSVET KIYIF+ LKQ+H
Sbjct: 48  GGKKKKRNKKSVETYKIYIFKVLKQVH 74



 Score = 26.9 bits (58), Expect(2) = 8e-06
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 44  ISSKAMWVMNSFIN 3
           ISSKAM +MNSFIN
Sbjct: 79  ISSKAMGIMNSFIN 92


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