BLASTX nr result

ID: Bupleurum21_contig00031347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031347
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63162.1| RNase H family protein [Asparagus officinalis]          72   4e-11
ref|XP_003528575.1| PREDICTED: uncharacterized protein LOC100807...    70   2e-10
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    69   3e-10
gb|ABA26991.1| TO45-2 [Taraxacum officinale]                           69   4e-10
ref|XP_003520295.1| PREDICTED: uncharacterized protein LOC100793...    69   4e-10

>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/61 (50%), Positives = 47/61 (77%)
 Frame = +2

Query: 227 KSVLIGKNLEISMKKELISLLREYKDIFAWSPSDMPGISEETALHYLSIDPLRKPIKQKK 406
           K + I ++L  S K++LISL+REY D+FAW+  DMPG+  + A+H+L+IDP  KP+KQ++
Sbjct: 124 KPIFIAEDLSSSEKEDLISLIREYIDVFAWNYEDMPGLDPKVAMHHLNIDPDAKPVKQQQ 183

Query: 407 R 409
           R
Sbjct: 184 R 184


>ref|XP_003528575.1| PREDICTED: uncharacterized protein LOC100807419 [Glycine max]
          Length = 2270

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/99 (39%), Positives = 51/99 (51%)
 Frame = +2

Query: 113  EEAAIDASLRTFLRKDHKPTTSPGVETEAILLDPKTPDKSVLIGKNLEISMKKELISLLR 292
            E+ AI   L   L  + K         E I L  K   K V IG +LE ++K+ +I LL+
Sbjct: 1145 EDDAIPEELARLLEYEKKTIRPHEEVVEVINLGTKEDKKEVKIGASLEATVKRRVIELLK 1204

Query: 293  EYKDIFAWSPSDMPGISEETALHYLSIDPLRKPIKQKKR 409
            EY D+FAWS  DMPG+      H L + P   P+KQK R
Sbjct: 1205 EYADVFAWSYQDMPGLDPRIVEHRLPLKPECPPVKQKLR 1243


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/61 (50%), Positives = 45/61 (73%)
 Frame = +2

Query: 227 KSVLIGKNLEISMKKELISLLREYKDIFAWSPSDMPGISEETALHYLSIDPLRKPIKQKK 406
           K + I ++L  S K+ LISL+REY D+FAW+  DMPG+  + A+H L+IDP  KP+KQ++
Sbjct: 628 KPIFIAEDLSSSEKENLISLIREYIDVFAWNYEDMPGLDPKVAMHRLNIDPDVKPVKQQQ 687

Query: 407 R 409
           R
Sbjct: 688 R 688


>gb|ABA26991.1| TO45-2 [Taraxacum officinale]
          Length = 113

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/74 (43%), Positives = 46/74 (62%)
 Frame = +2

Query: 188 ETEAILLDPKTPDKSVLIGKNLEISMKKELISLLREYKDIFAWSPSDMPGISEETALHYL 367
           E  +I ++PK  D+ + +GK L   ++K L +LL+ Y D+FAW P DM GI      H L
Sbjct: 2   EDNSIQINPKFADQVIKVGKELPAGLRKGLEALLKNYVDVFAWEPEDMTGIPRTVGEHRL 61

Query: 368 SIDPLRKPIKQKKR 409
           +++P   PIKQKKR
Sbjct: 62  NVNPDFTPIKQKKR 75


>ref|XP_003520295.1| PREDICTED: uncharacterized protein LOC100793173 [Glycine max]
          Length = 1150

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/113 (34%), Positives = 63/113 (55%)
 Frame = +2

Query: 71  NQEVQSIEALIDTGEEAAIDASLRTFLRKDHKPTTSPGVETEAILLDPKTPDKSVLIGKN 250
           +QE+   E   D  EE  + + L   + ++ +       ETE + L   +  + V IG  
Sbjct: 465 SQEMNQTEDEED--EEMGLPSELERMVAQEDQEMGPHQEETELVDLGIGSGKREVKIGTG 522

Query: 251 LEISMKKELISLLREYKDIFAWSPSDMPGISEETALHYLSIDPLRKPIKQKKR 409
           +   +++ELI+LL++Y+DIFAWS  DMPG+S +   H L ++P   P+KQK R
Sbjct: 523 IAAPIREELITLLKDYQDIFAWSYQDMPGLSSDIVQHRLPLNPGCSPVKQKLR 575


Top