BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031340
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]   273   1e-99
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi...   273   2e-99
ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|2...   248   2e-91
ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containi...   239   7e-89
ref|XP_002869597.1| pentatricopeptide repeat-containing protein ...   239   2e-85

>emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
          Length = 483

 Score =  273 bits (697), Expect(2) = 1e-99
 Identities = 136/214 (63%), Positives = 163/214 (76%)
 Frame = +2

Query: 242 NGVCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEM 421
           NGV P D+T+NTLI+G C+ GKL EANK+F+EMK                GYSQVGN EM
Sbjct: 245 NGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEM 304

Query: 422 AGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIR 601
            G+L +EM +N IKADILTYNALILGLC EG TKKAAYLVKELD++ LVPNSSTF+ALI 
Sbjct: 305 GGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALIT 364

Query: 602 GQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAP 781
           GQC RK+S+RAFQLYKSMI SGCHPN HT  ML+ST C+NED++   +V+REM +R  AP
Sbjct: 365 GQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAP 424

Query: 782 NSMTLTDLFNGLGHRGKDGLALKLSKEIEGKHIM 883
           +S TL++L  GL   GK+ LALKL KE+E KH+M
Sbjct: 425 DSDTLSELCRGLWLSGKEELALKLCKEMEMKHLM 458



 Score =  117 bits (294), Expect(2) = 1e-99
 Identities = 52/78 (66%), Positives = 65/78 (83%)
 Frame = +3

Query: 3   GDIVLRFYKEMQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNT 182
           GDI L FY+EMQR RISPNVYT NMV+ A CK GKLEKA+ +F++ME++GF P + SYNT
Sbjct: 162 GDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNT 221

Query: 183 MIAGYCKQGLLSSALKLK 236
           +IAGYC +GLL+S +KLK
Sbjct: 222 LIAGYCNKGLLNSGMKLK 239



 Score = 63.9 bits (154), Expect(2) = 9e-18
 Identities = 44/166 (26%), Positives = 70/166 (42%)
 Frame = +2

Query: 242 NGVCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEM 421
           NG+    +TYN LI GLC EG+  +A  L  E+                 G     N E 
Sbjct: 315 NGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSER 374

Query: 422 AGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIR 601
           A QL++ M ++    +  T+  LI   CK      A  +V+E+ ++ + P+S T + L R
Sbjct: 375 AFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCR 434

Query: 602 GQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSG 739
           G       + A +L K M      P        ++   E+E+  +G
Sbjct: 435 GLWLSGKEELALKLCKEMEMKHLMPEGFDKXKTINXRAESEEKENG 480



 Score = 53.1 bits (126), Expect(2) = 9e-18
 Identities = 26/72 (36%), Positives = 42/72 (58%)
 Frame = +3

Query: 33  MQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNTMIAGYCKQGL 212
           M+++ + P+  TFN ++   C+ GKL +A  IF EM++    PN  +YNT+I GY + G 
Sbjct: 242 MEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGN 301

Query: 213 LSSALKLKDGMV 248
                +L D M+
Sbjct: 302 SEMGGRLHDEML 313



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 56/206 (27%), Positives = 92/206 (44%)
 Frame = +2

Query: 248 VCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEMAG 427
           + P+  T N ++   CK GKL +A ++F +M+                GY   G      
Sbjct: 177 ISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGM 236

Query: 428 QLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIRGQ 607
           +L   M KN ++ D +T+N LI G C+ G   +A  +  E+    +VPN+ T+  LI G 
Sbjct: 237 KLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGY 296

Query: 608 CARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAPNS 787
               +S+   +L+  M+ +G   +  T N L+  LC        A +++E+      PNS
Sbjct: 297 SQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNS 356

Query: 788 MTLTDLFNGLGHRGKDGLALKLSKEI 865
            T + L  G   R     A +L K +
Sbjct: 357 STFSALITGQCVRKNSERAFQLYKSM 382



 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 44/203 (21%), Positives = 82/203 (40%)
 Frame = +2

Query: 257 SDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEMAGQLF 436
           S   +++L     +  KL  A  +F +MK                    +   ++A   +
Sbjct: 110 SPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFY 169

Query: 437 EEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIRGQCAR 616
            EM +  I  ++ T N ++   CK G  +KA  + K+++     P  +++  LI G C +
Sbjct: 170 REMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNK 229

Query: 617 KDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAPNSMTL 796
                  +L   M  +G  P++ T N L++  C     +   ++  EM      PN++T 
Sbjct: 230 GLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITY 289

Query: 797 TDLFNGLGHRGKDGLALKLSKEI 865
             L NG    G   +  +L  E+
Sbjct: 290 NTLINGYSQVGNSEMGGRLHDEM 312



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 43/159 (27%), Positives = 74/159 (46%)
 Frame = +2

Query: 407 GNHEMAGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTF 586
           G  E A ++F++M        I +YN LI G C +G+      L   ++K  + P+  TF
Sbjct: 195 GKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTF 254

Query: 587 AALIRGQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLD 766
             LI G C       A +++  M ++   PN  T N L++   +  +   G ++  EML 
Sbjct: 255 NTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLR 314

Query: 767 RGFAPNSMTLTDLFNGLGHRGKDGLALKLSKEIEGKHIM 883
            G   + +T   L  GL   G+   A  L KE++ ++++
Sbjct: 315 NGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV 353


>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
            mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  273 bits (697), Expect(2) = 2e-99
 Identities = 136/214 (63%), Positives = 163/214 (76%)
 Frame = +2

Query: 242  NGVCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEM 421
            NGV P D+T+NTLI+G C+ GKL EANK+F+EMK                GYSQVGN EM
Sbjct: 378  NGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEM 437

Query: 422  AGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIR 601
             G+L +EM +N IKADILTYNALILGLC EG TKKAAYLVKELD++ LVPNSSTF+ALI 
Sbjct: 438  GGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALIT 497

Query: 602  GQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAP 781
            GQC RK+S+RAFQLYKSMI SGCHPN HT  ML+ST C+NED++   +V+REM +R  AP
Sbjct: 498  GQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAP 557

Query: 782  NSMTLTDLFNGLGHRGKDGLALKLSKEIEGKHIM 883
            +S TL++L  GL   GK+ LALKL KE+E KH+M
Sbjct: 558  DSDTLSELCRGLWLSGKEELALKLCKEMEMKHLM 591



 Score =  117 bits (293), Expect(2) = 2e-99
 Identities = 52/78 (66%), Positives = 64/78 (82%)
 Frame = +3

Query: 3   GDIVLRFYKEMQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNT 182
           GDI L FY+EMQR RISPNVYT NMV+ A CK GKLEKA+ +F+ ME++GF P + SYNT
Sbjct: 295 GDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNT 354

Query: 183 MIAGYCKQGLLSSALKLK 236
           +IAGYC +GLL+S +KLK
Sbjct: 355 LIAGYCNKGLLNSGMKLK 372



 Score = 64.3 bits (155), Expect(2) = 7e-18
 Identities = 44/166 (26%), Positives = 71/166 (42%)
 Frame = +2

Query: 242 NGVCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEM 421
           NG+    +TYN LI GLC EG+  +A  L  E+                 G     N E 
Sbjct: 448 NGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSER 507

Query: 422 AGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIR 601
           A QL++ M ++    +  T+  LI   CK      A  +V+E+ ++ + P+S T + L R
Sbjct: 508 AFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCR 567

Query: 602 GQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSG 739
           G       + A +L K M      P     +  ++   E+E+  +G
Sbjct: 568 GLWLSGKEELALKLCKEMEMKHLMPEGFDKSKTINFRAESEEKENG 613



 Score = 53.1 bits (126), Expect(2) = 7e-18
 Identities = 26/72 (36%), Positives = 42/72 (58%)
 Frame = +3

Query: 33  MQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNTMIAGYCKQGL 212
           M+++ + P+  TFN ++   C+ GKL +A  IF EM++    PN  +YNT+I GY + G 
Sbjct: 375 MEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGN 434

Query: 213 LSSALKLKDGMV 248
                +L D M+
Sbjct: 435 SEMGGRLHDEML 446



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 56/206 (27%), Positives = 91/206 (44%)
 Frame = +2

Query: 248 VCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEMAG 427
           + P+  T N ++   CK GKL +A ++F  M+                GY   G      
Sbjct: 310 ISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGM 369

Query: 428 QLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIRGQ 607
           +L   M KN ++ D +T+N LI G C+ G   +A  +  E+    +VPN+ T+  LI G 
Sbjct: 370 KLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGY 429

Query: 608 CARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAPNS 787
               +S+   +L+  M+ +G   +  T N L+  LC        A +++E+      PNS
Sbjct: 430 SQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNS 489

Query: 788 MTLTDLFNGLGHRGKDGLALKLSKEI 865
            T + L  G   R     A +L K +
Sbjct: 490 STFSALITGQCVRKNSERAFQLYKSM 515



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 44/203 (21%), Positives = 81/203 (39%)
 Frame = +2

Query: 257 SDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEMAGQLF 436
           S   +++L     +  KL  A  +F +MK                    +   ++A   +
Sbjct: 243 SPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFY 302

Query: 437 EEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIRGQCAR 616
            EM +  I  ++ T N ++   CK G  +KA  + K ++     P  +++  LI G C +
Sbjct: 303 REMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNK 362

Query: 617 KDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAPNSMTL 796
                  +L   M  +G  P++ T N L++  C     +   ++  EM      PN++T 
Sbjct: 363 GLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITY 422

Query: 797 TDLFNGLGHRGKDGLALKLSKEI 865
             L NG    G   +  +L  E+
Sbjct: 423 NTLINGYSQVGNSEMGGRLHDEM 445



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 43/159 (27%), Positives = 73/159 (45%)
 Frame = +2

Query: 407 GNHEMAGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTF 586
           G  E A ++F+ M        I +YN LI G C +G+      L   ++K  + P+  TF
Sbjct: 328 GKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTF 387

Query: 587 AALIRGQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLD 766
             LI G C       A +++  M ++   PN  T N L++   +  +   G ++  EML 
Sbjct: 388 NTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLR 447

Query: 767 RGFAPNSMTLTDLFNGLGHRGKDGLALKLSKEIEGKHIM 883
            G   + +T   L  GL   G+   A  L KE++ ++++
Sbjct: 448 NGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV 486


>ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|222861287|gb|EEE98829.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  248 bits (634), Expect(2) = 2e-91
 Identities = 122/214 (57%), Positives = 155/214 (72%)
 Frame = +2

Query: 242 NGVCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEM 421
           NG+ P+ +T+N+LIHG CKEGKL EAN+ F+EMK                GY QVGN  M
Sbjct: 263 NGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNM 322

Query: 422 AGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIR 601
           AG+++EEM +N +KADILTYNALILGLCKEG TKKAA+LVKELDK+ LVPN+ST++ALI 
Sbjct: 323 AGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALIS 382

Query: 602 GQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAP 781
           GQCARK+S RAFQLYKSM+ SGCHPNE T  ML S   +NED+     VL +M  R  A 
Sbjct: 383 GQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMAS 442

Query: 782 NSMTLTDLFNGLGHRGKDGLALKLSKEIEGKHIM 883
           +S TL ++++GL   GK+ LA+KL  E+E + ++
Sbjct: 443 DSNTLLEIYDGLCQCGKENLAMKLCHEMEARRLI 476



 Score =  114 bits (286), Expect(2) = 2e-91
 Identities = 55/80 (68%), Positives = 66/80 (82%)
 Frame = +3

Query: 6   DIVLRFYKEMQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNTM 185
           DI L FY+EM+R RISPN YTFN+V++ALCK GKLEKAV + REMES+G  PNV SYNT+
Sbjct: 181 DIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTL 240

Query: 186 IAGYCKQGLLSSALKLKDGM 245
           IAG+C +GLLS A KLK+ M
Sbjct: 241 IAGHCNKGLLSIATKLKNLM 260



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 57/206 (27%), Positives = 99/206 (48%)
 Frame = +2

Query: 248 VCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEMAG 427
           + P+  T+N ++  LCK GKL +A ++  EM+                G+   G   +A 
Sbjct: 195 ISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIAT 254

Query: 428 QLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIRGQ 607
           +L   M KN ++ +++T+N+LI G CKEG   +A     E+    + PN+ T+  LI G 
Sbjct: 255 KLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGY 314

Query: 608 CARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAPNS 787
               +S  A ++Y+ M+ +G   +  T N L+  LC+       A +++E+      PN+
Sbjct: 315 GQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNA 374

Query: 788 MTLTDLFNGLGHRGKDGLALKLSKEI 865
            T + L +G   R     A +L K +
Sbjct: 375 STYSALISGQCARKNSDRAFQLYKSM 400



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 48/199 (24%), Positives = 83/199 (41%)
 Frame = +2

Query: 269 YNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEMAGQLFEEMS 448
           +++L        K   A  +F+ MK                        ++A   + EM 
Sbjct: 132 FDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMR 191

Query: 449 KNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIRGQCARKDSQ 628
           +  I  +  T+N ++  LCK G  +KA  +++E++   + PN  ++  LI G C +    
Sbjct: 192 RCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLS 251

Query: 629 RAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAPNSMTLTDLF 808
            A +L   M  +G  PN  T N L+   C+    +   +   EM      PN++T   L 
Sbjct: 252 IATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLI 311

Query: 809 NGLGHRGKDGLALKLSKEI 865
           NG G  G   +A K+ +E+
Sbjct: 312 NGYGQVGNSNMAGKVYEEM 330



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
 Frame = +3

Query: 33  MQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNTMIAGYCKQGL 212
           M ++ + PNV TFN ++   CK GKL +A   F EM+ +   PN  +YNT+I GY + G 
Sbjct: 260 MGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGN 319

Query: 213 LSSALKLKDGMV--SAQVILLTTRSFMDSAKKGNYLKQTSFSMR 338
            + A K+ + M+    +  +LT  + +    K    K+ +F ++
Sbjct: 320 SNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVK 363



 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 24/77 (31%), Positives = 45/77 (58%)
 Frame = +3

Query: 18  RFYKEMQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNTMIAGY 197
           + Y+EM R+ +  ++ T+N ++  LCK GK +KA  + +E++     PN ++Y+ +I+G 
Sbjct: 325 KVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQ 384

Query: 198 CKQGLLSSALKLKDGMV 248
           C +     A +L   MV
Sbjct: 385 CARKNSDRAFQLYKSMV 401


>ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
           gi|449528063|ref|XP_004171026.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  239 bits (609), Expect(2) = 7e-89
 Identities = 123/214 (57%), Positives = 151/214 (70%)
 Frame = +2

Query: 242 NGVCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEM 421
           NGV P  +T+NTL++G CK GKL EA+KLF EMKG               GYS+ GN EM
Sbjct: 302 NGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEM 361

Query: 422 AGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIR 601
             +LFEEMS+ ++KADILTYNALILGLCKEG TKKAAYLV+ELD+K LVPN+STF+ALI 
Sbjct: 362 GNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIY 421

Query: 602 GQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAP 781
           GQC +K S+RAFQ+YKSMI S   P + T  MLLST CENEDY+   Q+L EML+R  AP
Sbjct: 422 GQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAP 481

Query: 782 NSMTLTDLFNGLGHRGKDGLALKLSKEIEGKHIM 883
           +   L +L  GLG  GK   A+ L  E+E + ++
Sbjct: 482 DVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLL 515



 Score =  115 bits (289), Expect(2) = 7e-89
 Identities = 53/81 (65%), Positives = 66/81 (81%)
 Frame = +3

Query: 3   GDIVLRFYKEMQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNT 182
           GDI L FY+EM+RSRI PN YT N+V+ A CKLG+L+KA  +F EM ++GF PNVASYNT
Sbjct: 219 GDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNT 278

Query: 183 MIAGYCKQGLLSSALKLKDGM 245
           +IAGYC +GLLSSA+KL+  M
Sbjct: 279 LIAGYCNKGLLSSAMKLRSVM 299



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 43/161 (26%), Positives = 73/161 (45%)
 Frame = +2

Query: 401 QVGNHEMAGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSS 580
           ++G  + A  +FEEM       ++ +YN LI G C +G+   A  L   ++K  + P+  
Sbjct: 250 KLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVV 309

Query: 581 TFAALIRGQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREM 760
           TF  L+ G C     Q A +L+  M      P   T N+L++   +  +   G ++  EM
Sbjct: 310 TFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEM 369

Query: 761 LDRGFAPNSMTLTDLFNGLGHRGKDGLALKLSKEIEGKHIM 883
                  + +T   L  GL   GK   A  L +E++ K ++
Sbjct: 370 SRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLV 410



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 38/150 (25%), Positives = 68/150 (45%)
 Frame = +2

Query: 416 EMAGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAAL 595
           ++A   + EM ++ I  +  T N +I   CK G   KA  + +E+      PN +++  L
Sbjct: 220 DIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTL 279

Query: 596 IRGQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGF 775
           I G C +     A +L   M  +G  P+  T N L++  C+       +++  EM     
Sbjct: 280 IAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSL 339

Query: 776 APNSMTLTDLFNGLGHRGKDGLALKLSKEI 865
           +P ++T   L NG    G   +  +L +E+
Sbjct: 340 SPTTVTYNILINGYSKAGNCEMGNRLFEEM 369



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
 Frame = +3

Query: 33  MQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNTMIAGYCKQGL 212
           M+++ + P+V TFN +V   CK+GKL++A  +F EM+ +   P   +YN +I GY K G 
Sbjct: 299 MEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGN 358

Query: 213 LSSALKLKDGMVSAQV--ILLTTRSFMDSAKKGNYLKQTSFSMR 338
                +L + M   QV   +LT  + +    K    K+ ++ +R
Sbjct: 359 CEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVR 402



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 24/79 (30%), Positives = 46/79 (58%)
 Frame = +3

Query: 18  RFYKEMQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNTMIAGY 197
           R ++EM R ++  ++ T+N ++  LCK GK +KA  + RE++  G  PN ++++ +I G 
Sbjct: 364 RLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQ 423

Query: 198 CKQGLLSSALKLKDGMVSA 254
           C Q     A ++   M+ +
Sbjct: 424 CVQKQSERAFQIYKSMIKS 442


>ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315433|gb|EFH45856.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 538

 Score =  239 bits (609), Expect(2) = 2e-85
 Identities = 118/217 (54%), Positives = 152/217 (70%)
 Frame = +2

Query: 242 NGVCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEM 421
           NG+ P+ +T+NTLIHG C+  KL EA+K+F EMK                GYSQ G+HEM
Sbjct: 302 NGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEM 361

Query: 422 AGQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIR 601
           A + +E+M  N I+ DILTYN LILGLCK+  T+KAA  VKELDK+ LVPNSSTF+ALI 
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421

Query: 602 GQCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAP 781
           GQC R+++ R F+LYKSMI SGCHPNE T N+L+S  C+NED++  AQVLREM+ R    
Sbjct: 422 GQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPL 481

Query: 782 NSMTLTDLFNGLGHRGKDGLALKLSKEIEGKHIMVVP 892
           +S T+  + NGL H+GKD L  +L +E+EGK  +  P
Sbjct: 482 DSRTVHQVCNGLNHQGKDQLVKELLQEMEGKKFLQEP 518



 Score =  104 bits (259), Expect(2) = 2e-85
 Identities = 47/80 (58%), Positives = 64/80 (80%)
 Frame = +3

Query: 6   DIVLRFYKEMQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNTM 185
           DI LRFY+EM+R +ISPN YT NMV++  C+ GKL+K + + ++ME LGF+    SYNT+
Sbjct: 220 DIALRFYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTL 279

Query: 186 IAGYCKQGLLSSALKLKDGM 245
           IAG+C++GLLSSALKLK+ M
Sbjct: 280 IAGHCEKGLLSSALKLKNMM 299



 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 52/189 (27%), Positives = 91/189 (48%)
 Frame = +2

Query: 248 VCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEMAG 427
           + P+  T N ++ G C+ GKL +  +L  +M+                G+ + G    A 
Sbjct: 234 ISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSAL 293

Query: 428 QLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIRGQ 607
           +L   M KN ++ +++T+N LI G C+    ++A+ +  E+    L PN+ T+  LI G 
Sbjct: 294 KLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGY 353

Query: 608 CARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAPNS 787
             + D + AF+ Y+ M+ +G   +  T N L+  LC+       AQ ++E+      PNS
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNS 413

Query: 788 MTLTDLFNG 814
            T + L  G
Sbjct: 414 STFSALIMG 422



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 52/213 (24%), Positives = 95/213 (44%)
 Frame = +2

Query: 245 GVCPSDITYNTLIHGLCKEGKLLEANKLFNEMKGXXXXXXXXXXXXXXXGYSQVGNHEMA 424
           G  P+  + N  +  L  +G++  A + + EM+                GY + G  +  
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNTYTLNMVMSGYCRSGKLDKG 257

Query: 425 GQLFEEMSKNEIKADILTYNALILGLCKEGMTKKAAYLVKELDKKKLVPNSSTFAALIRG 604
            +L ++M +   +A  ++YN LI G C++G+   A  L   + K  L PN  TF  LI G
Sbjct: 258 IELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHG 317

Query: 605 QCARKDSQRAFQLYKSMISSGCHPNEHTLNMLLSTLCENEDYNSGAQVLREMLDRGFAPN 784
            C     Q A +++  M +    PN  T N L++   +  D+    +   +M+  G   +
Sbjct: 318 FCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377

Query: 785 SMTLTDLFNGLGHRGKDGLALKLSKEIEGKHIM 883
            +T   L  GL  + K   A +  KE++ ++++
Sbjct: 378 ILTYNTLILGLCKQAKTRKAAQFVKELDKENLV 410



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 29/78 (37%), Positives = 46/78 (58%)
 Frame = +3

Query: 15  LRFYKEMQRSRISPNVYTFNMVVAALCKLGKLEKAVAIFREMESLGFKPNVASYNTMIAG 194
           L+    M ++ + PNV TFN ++   C+  KL++A  +F EM++L   PN  +YNT+I G
Sbjct: 293 LKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLING 352

Query: 195 YCKQGLLSSALKLKDGMV 248
           Y +QG    A +  + MV
Sbjct: 353 YSQQGDHEMAFRFYEDMV 370