BLASTX nr result

ID: Bupleurum21_contig00031337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031337
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   140   2e-31
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   131   8e-29
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   130   1e-28
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    99   6e-19
ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232...    94   1e-17

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  140 bits (352), Expect = 2e-31
 Identities = 75/146 (51%), Positives = 94/146 (64%)
 Frame = +3

Query: 147 KTTGDIRRLTEKEVQQKREQGLCYRCDDKWHINHRCRRCELSVLLMXXXXXXXXXXXGEL 326
           K  G+IRRL+EKE+Q KRE GLC+RCD+KW I HRC++ ELS+LL            G L
Sbjct: 329 KPFGEIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILL---GHEEEEEEYGSL 385

Query: 327 SAAVXXXXXXXXXXXXXXXXXRVSLCSVMGITSPKTMRLEGVINGVKVIVMVDPGATHNF 506
              +                  +SL SVMGI+SPKT+++EG I G KVIVMVDPGATHNF
Sbjct: 386 MENIQPAHPDDSQLEIHSP--EISLNSVMGISSPKTLKMEGTIYGQKVIVMVDPGATHNF 443

Query: 507 ISTVAAKHLQLPITDSKNFGVTLGTG 584
           IS    + LQ+PI+ S+ FGV+LGTG
Sbjct: 444 ISLDTVRRLQIPISSSRPFGVSLGTG 469


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  131 bits (330), Expect = 8e-29
 Identities = 74/161 (45%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
 Frame = +3

Query: 114 AIVSSQNRSTH----KTTGDIRRLTEKEVQQKREQGLCYRCDDKWHINHRCRRCELSVLL 281
           +IVS     TH    +  G+IRRL+EKE+Q KRE+GLC+RCDDKW + HRC++ ELSVLL
Sbjct: 271 SIVSPAKTKTHIPIARPYGEIRRLSEKELQHKRERGLCFRCDDKWSVGHRCKK-ELSVLL 329

Query: 282 MXXXXXXXXXXXGELSAAVXXXXXXXXXXXXXXXXXRVSLCSVMGITSPKTMRLEGVING 461
                       GEL  A                   +SL SVMG ++PKT++L G I G
Sbjct: 330 SCKEDEEIEY--GELENA-PQPEIPNTHIAETFVNPEISLNSVMGFSNPKTLKLRGTIYG 386

Query: 462 VKVIVMVDPGATHNFISTVAAKHLQLPITDSKNFGVTLGTG 584
             VIVM+DPGATHNF+S    + L +P++ +K F V+LGTG
Sbjct: 387 EAVIVMIDPGATHNFVSIHTVERLNIPVSHAKGFEVSLGTG 427


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  130 bits (328), Expect = 1e-28
 Identities = 67/143 (46%), Positives = 94/143 (65%)
 Frame = +3

Query: 156 GDIRRLTEKEVQQKREQGLCYRCDDKWHINHRCRRCELSVLLMXXXXXXXXXXXGELSAA 335
           G++RRLTEKE+Q+KR +GLC++CD+KW + H+CRR ELSVL M           G LS +
Sbjct: 398 GEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDELE--GALSGS 455

Query: 336 VXXXXXXXXXXXXXXXXXRVSLCSVMGITSPKTMRLEGVINGVKVIVMVDPGATHNFIST 515
                              VSL SV+G+++PKTM+L G+I+  +V+VM+DPGATHNF+S 
Sbjct: 456 ------EAPPSPTEEIPPEVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSL 509

Query: 516 VAAKHLQLPITDSKNFGVTLGTG 584
            A   L +P+T+S+ FGV+LG G
Sbjct: 510 KAIDKLGIPVTESEEFGVSLGDG 532


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 54/161 (33%), Positives = 90/161 (55%)
 Frame = +3

Query: 114  AIVSSQNRSTHKTTGDIRRLTEKEVQQKREQGLCYRCDDKWHINHRCRRCELSVLLMXXX 293
            A+   +   + +    I+RLTE E+Q +RE+GL ++C++K+   HRC++ EL VLL+   
Sbjct: 960  AVAVGEKTMSQRREIPIKRLTESELQARREKGLWFKCEEKFSPGHRCKK-ELRVLLVHED 1018

Query: 294  XXXXXXXXGELSAAVXXXXXXXXXXXXXXXXXRVSLCSVMGITSPKTMRLEGVINGVKVI 473
                     + +                     +SL SV+G+T+P TM+++G I   +VI
Sbjct: 1019 EEEDDNQFDDRATE-------EPALIELKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVI 1071

Query: 474  VMVDPGATHNFISTVAAKHLQLPITDSKNFGVTLGTGLLYK 596
            ++VD GATHNF+S    + L LP+T + ++GV +GTG+  K
Sbjct: 1072 ILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMGTGISVK 1112


>ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232599 [Cucumis sativus]
          Length = 446

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
 Frame = +3

Query: 147 KTTGDIRRLTEKEVQQKREQGLCYRCDDKWHINHRCRRCELSVLLMXXXXXXXXXXXGEL 326
           K  G  ++L++ E Q KRE+GLC++CD+K++  H+C+  E+  L M             +
Sbjct: 268 KKEGPSKQLSDAEFQAKREKGLCFKCDEKYYSGHKCKAKEIRELRMFVVRADDVEEE-II 326

Query: 327 SAAVXXXXXXXXXXXXXXXXXRVSLC--SVMGITSPKTMRLEGVINGVKVIVMVDPGATH 500
                                 V LC  SV+G+T+P TM++ G I   +V+V+VD GATH
Sbjct: 327 EEDEYDLKGLKTMELQNDLGEVVELCINSVVGLTNPGTMKIRGTIQSKEVVVLVDCGATH 386

Query: 501 NFISTVAAKHLQLPITDSKNFGVTLGTGLLYK 596
           NFIS      L+LP  D+ N+GV LG+G   K
Sbjct: 387 NFISDRLVMTLKLPSKDTSNYGVILGSGTTIK 418


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