BLASTX nr result

ID: Bupleurum21_contig00031323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031323
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, parti...    89   3e-16
ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208...    88   6e-16
ref|XP_004153884.1| PREDICTED: enzymatic polyprotein-like, parti...    87   1e-15
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    87   1e-15
ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257...    87   1e-15

>ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
          Length = 1049

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
 Frame = -1

Query: 263 LDVLPTPSTDHEE---LQELLTQYDGVFKVPKSLPPMRNCNHEIKLKEGVEPFKQPAYRY 93
           LD +     D EE   +Q LL QY  +F+ PK LPP R C+H I L  G +P     Y+Y
Sbjct: 528 LDEVQRVKGDEEESPMIQVLLQQYTDLFEEPKGLPPKRECDHRILLVTGQKPINVRPYKY 587

Query: 92  PYMQRQEIEKLVKEMIEMGVIQPSHSPFSS 3
            Y+Q++EIEKLV EM++ GVI+PSHSP+SS
Sbjct: 588 GYVQKEEIEKLVVEMLQAGVIRPSHSPYSS 617


>ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208187 [Cucumis sativus]
          Length = 1969

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/75 (52%), Positives = 53/75 (70%)
 Frame = -1

Query: 227  ELQELLTQYDGVFKVPKSLPPMRNCNHEIKLKEGVEPFKQPAYRYPYMQRQEIEKLVKEM 48
            E ++L  +++ VF +P  L PMR  +H I+LKEG +P     YRYP+ Q+ EIEKLV EM
Sbjct: 1062 EFEQLQLEFENVFNMPAELSPMRQVDHRIQLKEGTDPINVRPYRYPHAQKNEIEKLVNEM 1121

Query: 47   IEMGVIQPSHSPFSS 3
            ++ G+IQPS SPFSS
Sbjct: 1122 LDFGIIQPSISPFSS 1136


>ref|XP_004153884.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
          Length = 564

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
 Frame = -1

Query: 263 LDVLPTPSTDHEE---LQELLTQYDGVFKVPKSLPPMRNCNHEIKLKEGVEPFKQPAYRY 93
           LD +     D EE   +Q LL QY  +F+ PK LPP R C+H I L  G +P     Y+Y
Sbjct: 393 LDEVQRVKGDEEESPMIQVLLQQYTDLFEEPKGLPPKRECDHRILLVTGQKPINVRPYKY 452

Query: 92  PYMQRQEIEKLVKEMIEMGVIQPSHSPFSS 3
            + Q++EIEKL+ EM+++G+I+PSHSP+SS
Sbjct: 453 GHTQKEEIEKLISEMLQVGIIRPSHSPYSS 482


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/74 (55%), Positives = 51/74 (68%)
 Frame = -1

Query: 224 LQELLTQYDGVFKVPKSLPPMRNCNHEIKLKEGVEPFKQPAYRYPYMQRQEIEKLVKEMI 45
           LQEL+ +++GVF+ P  LPP R   H I LKEG  P     YRYP  Q+ EIE+L+KEM+
Sbjct: 656 LQELMRRFEGVFETPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIKEML 715

Query: 44  EMGVIQPSHSPFSS 3
             G+IQPS SPFSS
Sbjct: 716 AAGIIQPSTSPFSS 729


>ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257206 [Vitis vinifera]
          Length = 787

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
 Frame = -1

Query: 308 KKNHMVFS-CF--CMVSALDVLPTPSTDHEELQELLTQYDGVFKVPKSLPPMRNCNHEIK 138
           ++ H +F+ CF   M +A    PT  T  + +Q LL +Y+ VF+ P SLPP+R  +H I 
Sbjct: 470 RQRHALFAVCFQPTMETAPADAPTKVTQ-QSMQRLLKEYEDVFQEPSSLPPVREVDHCIT 528

Query: 137 LKEGVEPFKQPAYRYPYMQRQEIEKLVKEMIEMGVIQPSHSPFSS 3
           LKEG EP K   YRY + Q+ EIEK V+EM++ G+I+PS S FSS
Sbjct: 529 LKEGTEPIKVRPYRYAHFQKAEIEKQVQEMLDSGLIRPSTSLFSS 573


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