BLASTX nr result

ID: Bupleurum21_contig00031319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031319
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   168   5e-40
gb|EEC80620.1| hypothetical protein OsI_22990 [Oryza sativa Indi...   166   2e-39
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   166   2e-39
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S...   165   3e-39
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   165   4e-39

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/150 (54%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
 Frame = -2

Query: 449 MHPEKSPGCDGLNPGFYQAYWSVVGSDVIKLCQHFFN-TGELPTDINRTLVCLIPKIKQP 273
           MHP K+PG DGL+  F+Q +W ++GSDVI   Q ++   G+L   +N+T + LIPK   P
Sbjct: 443 MHPNKAPGIDGLHALFFQKFWHILGSDVISFVQSWWRGMGDLGV-VNKTCIVLIPKCDHP 501

Query: 272 KHMTDLRPISLCNVLIRIISKVMANRLKSCLPDLISDKQSAFVEGRLLTDNALIAFEVNH 93
           + M D RPISLC VL +I+SK +ANRLK  LP +IS  QSAFV  RL+TDNAL+AFE+ H
Sbjct: 502 QSMKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVAFEIFH 561

Query: 92  YIKRRSQGKNGVAGLKIDVSKAYDRLEWSY 3
            +KR+   KNGV  LK+D+SKAYDR+EW +
Sbjct: 562 AMKRKDANKNGVCALKLDMSKAYDRVEWCF 591


>gb|EEC80620.1| hypothetical protein OsI_22990 [Oryza sativa Indica Group]
          Length = 492

 Score =  166 bits (420), Expect = 2e-39
 Identities = 74/147 (50%), Positives = 103/147 (70%)
 Frame = -2

Query: 443 PEKSPGCDGLNPGFYQAYWSVVGSDVIKLCQHFFNTGELPTDINRTLVCLIPKIKQPKHM 264
           P K+PG DG    FYQ  W +V  D++   + FF+TG +P+ +N T + LIPKI QP  +
Sbjct: 58  PLKAPGPDGFPARFYQCNWDIVKQDIMAAVRRFFHTGSMPSGVNETAIVLIPKIDQPVGL 117

Query: 263 TDLRPISLCNVLIRIISKVMANRLKSCLPDLISDKQSAFVEGRLLTDNALIAFEVNHYIK 84
            D RPISLCNV+ +++SK + NRL+ CL DL+SD+QSAFV GRL+TDNAL+AFE  H I+
Sbjct: 118 KDFRPISLCNVVYKVVSKCLVNRLRLCLDDLVSDEQSAFVPGRLITDNALLAFECFHSIQ 177

Query: 83  RRSQGKNGVAGLKIDVSKAYDRLEWSY 3
           +  Q    +   K+D+SKAYDR++W +
Sbjct: 178 KNKQPNKAMCAYKLDLSKAYDRVDWQF 204


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  166 bits (419), Expect = 2e-39
 Identities = 78/145 (53%), Positives = 106/145 (73%)
 Frame = -2

Query: 437 KSPGCDGLNPGFYQAYWSVVGSDVIKLCQHFFNTGELPTDINRTLVCLIPKIKQPKHMTD 258
           K+PG DG+   FY+ +WSVVG  V K      N G +P   N T++ LIPK   P+ + D
Sbjct: 25  KAPGADGIPSIFYKKFWSVVGDQVKKEVLAVLNGGPIPEGWNDTIIVLIPKTNTPQMLKD 84

Query: 257 LRPISLCNVLIRIISKVMANRLKSCLPDLISDKQSAFVEGRLLTDNALIAFEVNHYIKRR 78
           LRPISLCNVL ++ISKV+ANRLK  LP++IS+ QSAFV GRL+TDN L+A+E+ H++K  
Sbjct: 85  LRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYEIVHHLKSI 144

Query: 77  SQGKNGVAGLKIDVSKAYDRLEWSY 3
            +G  G+A +K+D+SKAYDR+EWS+
Sbjct: 145 KKGAGGLAAIKLDMSKAYDRVEWSF 169


>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
           gi|241943773|gb|EES16918.1| hypothetical protein
           SORBIDRAFT_08g007680 [Sorghum bicolor]
          Length = 649

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/149 (52%), Positives = 105/149 (70%)
 Frame = -2

Query: 449 MHPEKSPGCDGLNPGFYQAYWSVVGSDVIKLCQHFFNTGELPTDINRTLVCLIPKIKQPK 270
           M    +PG DG    FYQ +W ++G +V     +F N G LP DIN T + LIPK + P+
Sbjct: 1   MGANNAPGPDGFTARFYQLHWDLIGKEVTTAVLNFLNGGTLPADINHTTIVLIPKTRNPQ 60

Query: 269 HMTDLRPISLCNVLIRIISKVMANRLKSCLPDLISDKQSAFVEGRLLTDNALIAFEVNHY 90
            MT+ RPISLCNVL +I SKV+A RL+  L ++IS++QSAFV GRL+TDN LI++E  HY
Sbjct: 61  GMTEFRPISLCNVLYKICSKVLALRLREFLDEIISEEQSAFVPGRLITDNVLISYECIHY 120

Query: 89  IKRRSQGKNGVAGLKIDVSKAYDRLEWSY 3
           +KRR +GKNG   +K+D++KAYD +EW Y
Sbjct: 121 LKRR-KGKNGACAIKLDMAKAYDPVEWEY 148


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  165 bits (417), Expect = 4e-39
 Identities = 71/149 (47%), Positives = 108/149 (72%)
 Frame = -2

Query: 449  MHPEKSPGCDGLNPGFYQAYWSVVGSDVIKLCQHFFNTGELPTDINRTLVCLIPKIKQPK 270
            M+P KSPG DG+   F+Q +W+++G+DV+ +C  F N      D N +L+ LIPK++ PK
Sbjct: 728  MNPSKSPGSDGMPARFFQKFWNIIGNDVVDVCLRFLNGDGSIADFNHSLIALIPKVQNPK 787

Query: 269  HMTDLRPISLCNVLIRIISKVMANRLKSCLPDLISDKQSAFVEGRLLTDNALIAFEVNHY 90
             +T+ RPISLCNV+ +++SKV+ANRLKS LP++I++ QSAF+  R++ DN + AFE+ H 
Sbjct: 788  KVTEYRPISLCNVVYKLVSKVLANRLKSVLPEVIAENQSAFMSQRIIHDNIIAAFEIIHC 847

Query: 89   IKRRSQGKNGVAGLKIDVSKAYDRLEWSY 3
            +KRR +       LK+D++KAYDR+EW +
Sbjct: 848  LKRRGKDSRQKIALKLDMTKAYDRVEWGF 876


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