BLASTX nr result

ID: Bupleurum21_contig00031313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031313
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO18461.1| hypothetical protein [Oryza sativa Japonica Group]      62   4e-08
ref|NP_001051732.2| Os03g0822100 [Oryza sativa Japonica Group] g...    62   4e-08
ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group] g...    60   2e-07
gb|ABA95196.1| hAT family dimerisation domain containing protein...    59   3e-07
gb|AAN04982.1| putative transposase [Oryza sativa Japonica Group...    59   3e-07

>gb|AAO18461.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 669

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
 Frame = -1

Query: 372 NDIEQVRSKRKRSKVWATFEVIPPTIDDTTERAKCRKCGYMCVYTSKNGTGNMLKHQKIC 193
           N + Q  +++ RS+ W  F  +P  ID+     KC+ C          GT ++ KH   C
Sbjct: 149 NPVIQALTRKFRSEAWKEF--VPILIDNEVGAGKCKHCDTEIRAKRGAGTSSLRKHLTRC 206

Query: 192 QNSADIRQLV------LSSNNGSMTVRNGIFDPAIFRDLITNAVIRHNLPLQFVEYEGIR 31
           +      ++V      L S N S+ ++N  FDP + R  +   ++ H LP QFVEY+G R
Sbjct: 207 KKRISALKIVGNLDSTLMSPN-SVRLKNWSFDPEVSRKELMRMIVLHELPFQFVEYDGFR 265

Query: 30  EAFLNAHP 7
               + +P
Sbjct: 266 SFAASLNP 273


>ref|NP_001051732.2| Os03g0822100 [Oryza sativa Japonica Group]
           gi|108711807|gb|ABF99602.1| BED zinc finger family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108711808|gb|ABF99603.1| BED zinc finger family
           protein, expressed [Oryza sativa Japonica Group]
           gi|215704882|dbj|BAG94910.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255675011|dbj|BAF13646.2| Os03g0822100 [Oryza sativa
           Japonica Group]
          Length = 612

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
 Frame = -1

Query: 372 NDIEQVRSKRKRSKVWATFEVIPPTIDDTTERAKCRKCGYMCVYTSKNGTGNMLKHQKIC 193
           N + Q  +++ RS+ W  F  +P  ID+     KC+ C          GT ++ KH   C
Sbjct: 92  NPVIQALTRKFRSEAWKEF--VPILIDNEVGAGKCKHCDTEIRAKRGAGTSSLRKHLTRC 149

Query: 192 QNSADIRQLV------LSSNNGSMTVRNGIFDPAIFRDLITNAVIRHNLPLQFVEYEGIR 31
           +      ++V      L S N S+ ++N  FDP + R  +   ++ H LP QFVEY+G R
Sbjct: 150 KKRISALKIVGNLDSTLMSPN-SVRLKNWSFDPEVSRKELMRMIVLHELPFQFVEYDGFR 208

Query: 30  EAFLNAHP 7
               + +P
Sbjct: 209 SFAASLNP 216


>ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group]
           gi|255677983|dbj|BAF22239.2| Os07g0624100 [Oryza sativa
           Japonica Group]
          Length = 762

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
 Frame = -1

Query: 372 NDIEQVRSKRKRSKVWATFEVIPPTIDDTTERAKCRKCGYMCVYTSKNGTGNMLKHQKIC 193
           N + Q  +++ R + W  F  +P  ID+     KC+ C          GT ++ KH   C
Sbjct: 112 NPVIQALTRKFRYEAWKEF--VPILIDNEVGAGKCKHCDTEIRAKRGAGTSSLRKHLTRC 169

Query: 192 QNSADIRQLV------LSSNNGSMTVRNGIFDPAIFRDLITNAVIRHNLPLQFVEYEGIR 31
           +      ++V      L S N S+ ++N  FDP + R  +   ++ H LP QFVEY+G R
Sbjct: 170 KKRISALKIVGNLDFTLMSPN-SVRLKNWSFDPEVSRKELMRMIVLHELPFQFVEYDGFR 228

Query: 30  EAFLNAHP 7
               + +P
Sbjct: 229 SFAASLNP 236


>gb|ABA95196.1| hAT family dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 593

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
 Frame = -1

Query: 351 SKRKR-SKVWATFEVIPPTIDDTTE--RAKCRKCGYMCVYTSKNGTGNMLKHQKICQNSA 181
           SKR R S VW  F+ I  T  D  E  +A+CR C  +    S  GTG++ +H + C    
Sbjct: 76  SKRSRTSGVWQNFDEIKETCPDGREVSKARCRICRQILSARSSGGTGHLKRHAESCAKKQ 135

Query: 180 DIR----QLVLSSNNGSMTVRNGIFDPAIFRDLITNAVIRHNLPLQFVEYEGIREAFLNA 13
            I+    QL++   N  +TVR+  +DP + R+ +   + R +LPL F E          +
Sbjct: 136 GIQLRQQQLMV---NPDVTVRSWEYDPMVARESLVRLIARQDLPLNFGESPAFEHYIQQS 192

Query: 12  H 10
           H
Sbjct: 193 H 193


>gb|AAN04982.1| putative transposase [Oryza sativa Japonica Group]
           gi|31430627|gb|AAP52515.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
          Length = 595

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
 Frame = -1

Query: 351 SKRKR-SKVWATFEVIPPTIDDTTE--RAKCRKCGYMCVYTSKNGTGNMLKHQKICQNSA 181
           SKR R S VW +F+ I  T  D  E  +A+CR C  +    S  GTG++ +H + C    
Sbjct: 76  SKRSRTSGVWQSFDEIKETCPDGREVSKARCRICRQILSARSSGGTGHLKRHAESCAKKQ 135

Query: 180 DIR----QLVLSSNNGSMTVRNGIFDPAIFRDLITNAVIRHNLPLQFVEYEGIREAFLNA 13
            I+    QL+L+ +    TVR+  +DP + R+ +   + R +LPL F E          +
Sbjct: 136 GIQLRQQQLMLNPDG---TVRSWEYDPMVARESLVRLIARQDLPLNFGESPAFEHYIQQS 192

Query: 12  H 10
           H
Sbjct: 193 H 193


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