BLASTX nr result

ID: Bupleurum21_contig00031306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031306
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321528.1| predicted protein [Populus trichocarpa] gi|2...   225   5e-57
emb|CBI15206.3| unnamed protein product [Vitis vinifera]              224   1e-56
emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]   223   2e-56
ref|XP_003598017.1| Pentatricopeptide repeat-containing protein ...   216   2e-54
ref|XP_002329756.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53

>ref|XP_002321528.1| predicted protein [Populus trichocarpa] gi|222868524|gb|EEF05655.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  225 bits (573), Expect = 5e-57
 Identities = 105/147 (71%), Positives = 126/147 (85%)
 Frame = +2

Query: 2   ITFLGVLCACTHGGMVEKGRQFFDLMWKEYGIQPSIQHYGCLVDMLGRAGFVKEA*HLIN 181
           ITFL VL AC+HGGMV+KG +FFD+M KEY IQP+I+HYGC+VD+LGRAGFV+EA  LI+
Sbjct: 292 ITFLVVLSACSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLIS 351

Query: 182 SMPMKCNAIVWRTLLAACRVHGNVELGEEVRRHLLELEPDHSSDYVLLANMYAGAEQWRD 361
           +MPM+CNAIVWRTLLAACR+HGNVELG++VR+ LLELEPDHSSDYVLLAN YA A +W +
Sbjct: 352 NMPMQCNAIVWRTLLAACRLHGNVELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNE 411

Query: 362 VMNERHSMRSRGVQKPIPGNSIIGIQP 442
            M  R +M  RGVQKP PGNS++G  P
Sbjct: 412 AMRVRKTMHKRGVQKPEPGNSVVGRHP 438


>emb|CBI15206.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  224 bits (570), Expect = 1e-56
 Identities = 105/147 (71%), Positives = 125/147 (85%)
 Frame = +2

Query: 2   ITFLGVLCACTHGGMVEKGRQFFDLMWKEYGIQPSIQHYGCLVDMLGRAGFVKEA*HLIN 181
           +TFLGVLCAC+HGGMVE+GR++FD+M ++Y IQP+I+HYG +VD+LGRAG V+EA  LI 
Sbjct: 255 VTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIK 314

Query: 182 SMPMKCNAIVWRTLLAACRVHGNVELGEEVRRHLLELEPDHSSDYVLLANMYAGAEQWRD 361
           SMP++ N+IVWRTLLAACRVHGN+EL E+VR+ LLELEPDHSSDYVLLANMYA A QW  
Sbjct: 315 SMPIESNSIVWRTLLAACRVHGNLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNK 374

Query: 362 VMNERHSMRSRGVQKPIPGNSIIGIQP 442
           V+  R SM  RGVQKP PGNS IG QP
Sbjct: 375 VVRVRKSMHIRGVQKPKPGNSYIGFQP 401


>emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
          Length = 516

 Score =  223 bits (567), Expect = 2e-56
 Identities = 105/147 (71%), Positives = 124/147 (84%)
 Frame = +2

Query: 2   ITFLGVLCACTHGGMVEKGRQFFDLMWKEYGIQPSIQHYGCLVDMLGRAGFVKEA*HLIN 181
           +TFLGVLCAC+HGGMVE+GR++FD+M ++Y IQP+I+HYG +VD+LGRAG V+EA  LI 
Sbjct: 355 VTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIK 414

Query: 182 SMPMKCNAIVWRTLLAACRVHGNVELGEEVRRHLLELEPDHSSDYVLLANMYAGAEQWRD 361
           SMP++ N+IVWRTLLAACRVHGN+EL E+VR+ LLELEPDHSSDYVLLANMYA A QW  
Sbjct: 415 SMPIESNSIVWRTLLAACRVHGNLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNK 474

Query: 362 VMNERHSMRSRGVQKPIPGNSIIGIQP 442
           V   R SM  RGVQKP PGNS IG QP
Sbjct: 475 VXRVRKSMHIRGVQKPKPGNSYIGFQP 501


>ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487065|gb|AES68268.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 479

 Score =  216 bits (550), Expect = 2e-54
 Identities = 98/145 (67%), Positives = 124/145 (85%)
 Frame = +2

Query: 2   ITFLGVLCACTHGGMVEKGRQFFDLMWKEYGIQPSIQHYGCLVDMLGRAGFVKEA*HLIN 181
           ITFL VLCAC+HGG+V++GR++F++M ++Y I+P+I+HYGC+VD+LGRAG   EA  LI 
Sbjct: 321 ITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIK 380

Query: 182 SMPMKCNAIVWRTLLAACRVHGNVELGEEVRRHLLELEPDHSSDYVLLANMYAGAEQWRD 361
           SMP++CNAI+WRTLLAACR +GNVELGE+VR+HL+ELEPDHSSDYVLLANMYA   QW +
Sbjct: 381 SMPVECNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNE 440

Query: 362 VMNERHSMRSRGVQKPIPGNSIIGI 436
           +  ER SM+ R V+KP PGNS IGI
Sbjct: 441 MSKERRSMQERRVRKPEPGNSFIGI 465


>ref|XP_002329756.1| predicted protein [Populus trichocarpa] gi|222870664|gb|EEF07795.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  213 bits (541), Expect = 2e-53
 Identities = 100/140 (71%), Positives = 120/140 (85%)
 Frame = +2

Query: 2   ITFLGVLCACTHGGMVEKGRQFFDLMWKEYGIQPSIQHYGCLVDMLGRAGFVKEA*HLIN 181
           ITFL VL AC+HGGMV+KG +FFD+M KEY IQP+I+HYGC+VD+LGRAGFV+EA  LI+
Sbjct: 12  ITFLVVLSACSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLIS 71

Query: 182 SMPMKCNAIVWRTLLAACRVHGNVELGEEVRRHLLELEPDHSSDYVLLANMYAGAEQWRD 361
           +MPM+CNAIVWRTLLAACR+HGNVELG++V + LLELEPDHSSDYVLLAN YA A +W +
Sbjct: 72  NMPMQCNAIVWRTLLAACRLHGNVELGKQVPKQLLELEPDHSSDYVLLANTYASAGRWNE 131

Query: 362 VMNERHSMRSRGVQKPIPGN 421
            M  R +M  RGVQKP PG+
Sbjct: 132 AMRVRKTMHKRGVQKPEPGS 151


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