BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031298
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...    80   2e-13
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...    69   4e-10
emb|CBI16834.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|NP_172778.1| RNA recognition motif-containing protein [Arabi...    61   8e-08
ref|XP_002889992.1| RNA recognition motif-containing protein [Ar...    61   8e-08

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
           vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
           uncharacterized protein LOC100268141 isoform 2 [Vitis
           vinifera]
          Length = 647

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/57 (63%), Positives = 48/57 (84%), Gaps = 2/57 (3%)
 Frame = +2

Query: 164 VGDEQIHHQ--VYGGSQRMPYHGGGAISALAEDKMFGEDDEYDDLYNDVNVRQGFHQ 328
           + +EQ+ ++   YGG+Q+MP+ GGGAISALA+D++ GEDDEYDDLYNDVNV +GF Q
Sbjct: 1   MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 57


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
           gi|223546091|gb|EEF47594.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 644

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +2

Query: 164 VGDEQIHHQ--VYGGSQRMPYHGGGAISALAEDKMFGEDDEYDDLYNDVNVRQGFHQ 328
           + DEQI ++   YGG+Q++ Y G GAI ALAE++M GEDDEYDDLYNDVN+ + F Q
Sbjct: 1   MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQ 56


>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = +2

Query: 212 MPYHGGGAISALAEDKMFGEDDEYDDLYNDVNVRQGFHQ 328
           MP+ GGGAISALA+D++ GEDDEYDDLYNDVNV +GF Q
Sbjct: 1   MPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 39


>ref|NP_172778.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|4850402|gb|AAD31072.1|AC007357_21 Contains similarity
           to gb|Y12424 SGRP-1 protein frm Solanum commersonii and
           contains a PF|00076 RNA rocognition motif [Arabidopsis
           thaliana] gi|17064902|gb|AAL32605.1| Unknown protein
           [Arabidopsis thaliana] gi|27311939|gb|AAO00935.1|
           Unknown protein [Arabidopsis thaliana]
           gi|332190860|gb|AEE28981.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 573

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = +2

Query: 194 YGGSQRMPYHGGGAISALAEDKMFGEDDEYDDLYNDVNVRQGFHQ 328
           YGG+Q++ + G G I ALA++++ G+DDEYDDLY+DVNV + F Q
Sbjct: 7   YGGNQKILHQGSGTIPALADEELMGDDDEYDDLYSDVNVGESFFQ 51


>ref|XP_002889992.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297335834|gb|EFH66251.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 573

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = +2

Query: 194 YGGSQRMPYHGGGAISALAEDKMFGEDDEYDDLYNDVNVRQGFHQ 328
           YGG+Q++ + G G I ALA++++ G+DDEYDDLY+DVNV + F Q
Sbjct: 7   YGGNQKILHQGSGTIPALADEELMGDDDEYDDLYSDVNVGESFFQ 51