BLASTX nr result

ID: Bupleurum21_contig00031297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031297
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638290.1| hypothetical protein MTR_126s0001, partial [...    67   4e-09
dbj|BAB02729.1| unnamed protein product [Arabidopsis thaliana]         63   7e-08
gb|AAD48963.1|AF147263_5 contains similarity to transposases [Ar...    63   9e-08
ref|NP_001050398.2| Os03g0424600 [Oryza sativa Japonica Group] g...    62   2e-07
ref|XP_002450498.1| hypothetical protein SORBIDRAFT_05g006263 [S...    62   2e-07

>ref|XP_003638290.1| hypothetical protein MTR_126s0001, partial [Medicago truncatula]
           gi|355504225|gb|AES85428.1| hypothetical protein
           MTR_126s0001, partial [Medicago truncatula]
          Length = 555

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
 Frame = -3

Query: 614 IEFIRSLTTILNPSFPFKFVNLGRSCIK-VYHEVKATMTQTMDKLDGLISLSMDIFRYDT 438
           +E +R  +  LNP+ P    N+  + +  +Y + K  + Q +  +   ISLS D++  +T
Sbjct: 39  LEGMRKYSEFLNPNIPIPPRNVIEAYVSHLYTKEKPKLKQQLTTIPNRISLSFDLWESNT 98

Query: 437 YDCYSLKEPEGITVYDFLCIRAHFIDDNWTPKSWVIYYGDVYHILKVGYEKTILKCLSGL 258
            + Y             +C+ AHF+D NW   S VI +  VY        + +++ L+  
Sbjct: 99  TETY-------------ICLTAHFVDANWKLNSKVINFRLVYPPTSGEICERMVELLNDW 145

Query: 257 HIESKISTITPADSSKYDEMVEFVKDQLKEKKRLQIKWKPFQIRCCAGLFRRMVEAAFXX 78
            IE KI ++T  DSS+ + + E +K QL  +  L    + F + C A +  ++VE A   
Sbjct: 146 GIEKKIFSLTIDDSSENEILQEQLKTQLVLQNGLLCDGEFFHVNCFARVLNQIVEEALKL 205

Query: 77  XXXXXDKVLPS 45
                 K+  S
Sbjct: 206 VSCGVHKIRES 216


>dbj|BAB02729.1| unnamed protein product [Arabidopsis thaliana]
          Length = 579

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
 Frame = -3

Query: 671 DEEKVYH-AMARFVCEASVPIE------FIRSLTTILNPSFPFKFVNLGRSCIKVYHEVK 513
           DEEK  H AMA++   A V  +      F + ++ + +P +P     +     ++Y E K
Sbjct: 14  DEEKEAHNAMAKWFIAADVNPKTINTRSFAKFMSFLGDPKYPPSVSKVENEVFEIYEECK 73

Query: 512 ATMTQTMDKLDGLISLSMDIFRYDTYDCYSLKEPEGITVY--------DFLCIRAHFIDD 357
                      G ++LS        Y+   L    G   +        DF+C+ AHF+DD
Sbjct: 74  EKAKNFFKSFQGQLNLS--------YEWMLLGNGWGARDHIRGPVLHEDFVCLTAHFVDD 125

Query: 356 NWTPKSWVIYY---GDVYHILKVGYEKTILKCLSGLHIESKISTITPADSSKYD-EMVEF 189
           NW  K  ++ Y    D    +  GY       +    IE+K+ST+   +S  +D E ++ 
Sbjct: 126 NWKMKKRILAYTNTTDQEIPMDDGYVYPFRNAVQDFEIENKVSTLLLPNSEDFDEETLDP 185

Query: 188 VKDQLKEKKRLQIKWKPFQIRCCAGLFRRMVE 93
            +  ++E    Q   +   + CC+ LFR MV+
Sbjct: 186 FRKWIEEIGNNQFNPRVSLVYCCSDLFRLMVD 217


>gb|AAD48963.1|AF147263_5 contains similarity to transposases [Arabidopsis thaliana]
           gi|7267311|emb|CAB81093.1| AT4g05510 [Arabidopsis
           thaliana]
          Length = 604

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
 Frame = -3

Query: 704 GSSAGSNESACDEEKVYHAMARFVCEASVPI-----EFIRSLTTILNPSFPFKFVNLGRS 540
           G   G   +  D + V    +R +    +P      E +R   + +NP +     N   +
Sbjct: 85  GLDVGRKTTKIDHKVVREKFSRVIIRHDLPFLCVEYEELRDFISYMNPDYKCYTRNTAAA 144

Query: 539 -CIKVYHEVKATMTQTMDKLDGLISLSMDIFRYDTYDCYSLKEPEGITVYDFLCIRAHFI 363
             +K + + K  +   ++++   I L        T DC++    +G     ++ + AH++
Sbjct: 145 DVVKTWEKEKQILKSELERIPSRICL--------TSDCWTSLGGDG-----YIVLTAHYV 191

Query: 362 DDNWTPKSWVIYYGDVY--HILKVGYEKTILKCLSGLHIESKISTITPADSSKYDEMVEF 189
           D  W   S ++ + D+   H       K I +CL    IE K+ T+T  +++  + M E 
Sbjct: 192 DTRWILNSKILSFSDMLPPHTGDALASK-IHECLKEWGIEKKVFTLTLDNATANNSMQEV 250

Query: 188 VKDQLKEKKRLQIKWKPFQIRCCAGLFRRMVE 93
           + D+LK    L  K + F +RCCA +  R+V+
Sbjct: 251 LIDRLKLDNNLMCKGEFFHVRCCAHVLNRIVQ 282


>ref|NP_001050398.2| Os03g0424600 [Oryza sativa Japonica Group]
           gi|255674601|dbj|BAF12312.2| Os03g0424600 [Oryza sativa
           Japonica Group]
          Length = 544

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
 Frame = -3

Query: 602 RSLTTILNPSFPF-KFVNLGRSCIKVYHEVKATMTQTMDKLDGLISLSMDIFRYDTYDCY 426
           R     LNP F       +   C+  Y E K  + + + K +  +SL        T D +
Sbjct: 18  RRFCASLNPYFRVVSRTTIKGDCLAAYQEQKLALLEVLRKTNSRVSL--------TADMW 69

Query: 425 SLKEPEGITVYDFLCIRAHFIDDNWTPKSWVIYYGDVYHIL-KVGYEKTILKCLSGLHIE 249
           S  +  G     ++CI  HFID+ W  +  +I +  V      +     I+KC+    IE
Sbjct: 70  SSNQNLG-----YMCITCHFIDNEWNMQKRIIRFTQVRTPHDSIALFNEIIKCIQDWQIE 124

Query: 248 SKISTITPADSSKYDEMVEFVKDQLKEKKRLQIKWKPFQIRCCAGLFRRMVE 93
           SK+ +IT  ++S  D MV  +K  L  K  +  K + F   C A +F  +V+
Sbjct: 125 SKLFSITVDNASTNDSMVVELKGNLLGKLAMPCKGELFHFWCAAHIFNPIVQ 176


>ref|XP_002450498.1| hypothetical protein SORBIDRAFT_05g006263 [Sorghum bicolor]
           gi|241936341|gb|EES09486.1| hypothetical protein
           SORBIDRAFT_05g006263 [Sorghum bicolor]
          Length = 521

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 62/248 (25%), Positives = 98/248 (39%), Gaps = 18/248 (7%)
 Frame = -3

Query: 734 VNQKQSDEQQGSSAGSNESACDEEKVYHAMARFVCEASVPIEFI-----RSLTTILNPSF 570
           VNQ +S           +   +++     +AR +     P+  +     R   + LNP F
Sbjct: 90  VNQLKSTVMSPEGIALKDWRFNQDISRKELARMISVHGFPLSIVDYDGFRRFVSSLNPVF 149

Query: 569 PFKFVN---LGRSCIKVYHEVKATMTQTMDKLDGLISLSMDIFRYDTYDCYSLKEPEGIT 399
             K V+   +   C K Y E +  +   +  + G +SL+MD++  +              
Sbjct: 150 --KMVSRRTITDDCSKRYLEERQVLLDVVKNVKGRVSLTMDMWTSNQ------------- 194

Query: 398 VYDFLCIRAHFIDDNWTPKSWVIYYGDVYHILKVGYEKT----------ILKCLSGLHIE 249
              ++CI  HF DD+W              ILK  + KT          ILK L   +IE
Sbjct: 195 TLGYMCITCHFTDDDWKMHK---------RILKFSFMKTPHTGVAMFNVILKFLQEWNIE 245

Query: 248 SKISTITPADSSKYDEMVEFVKDQLKEKKRLQIKWKPFQIRCCAGLFRRMVEAAFXXXXX 69
            K+  IT  ++S  + M++ +K  L EKK L  K K    RC A +   + +A F     
Sbjct: 246 DKLFAITLDNASNNNAMMKLLKANLLEKKLLLGKGKLLHQRCAAHVLNLICKAGFQIINP 305

Query: 68  XXDKVLPS 45
              KV  S
Sbjct: 306 IVHKVRES 313


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