BLASTX nr result

ID: Bupleurum21_contig00031281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031281
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518432.1| conserved hypothetical protein [Ricinus comm...    89   4e-16
ref|XP_002331552.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
gb|AAC17615.1| Similar to hypothetical protein HYP1 gb|Z97338 fr...    86   2e-15
ref|NP_172660.5| putative ERD4 protein [Arabidopsis thaliana] gi...    86   2e-15
dbj|BAF98597.1| CM0545.360.nc [Lotus japonicus]                        86   4e-15

>ref|XP_002518432.1| conserved hypothetical protein [Ricinus communis]
           gi|223542277|gb|EEF43819.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 773

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/76 (53%), Positives = 49/76 (64%)
 Frame = +1

Query: 115 MATFGDIGLSXXXXXXXXXXXXXXXXXXXXQPFNDRVYFPKWYLRRLRDSPSRSGGLVSK 294
           MAT GDIG+S                    QPFNDRVYFPKWYL+ +R SP+RSG  V +
Sbjct: 1   MATLGDIGVSAAINLLTAFIFLLAFAILRLQPFNDRVYFPKWYLKGIRSSPTRSGAFVRR 60

Query: 295 FVNLDLKSYVRFLNWV 342
           FVNLD +SY+RFLNW+
Sbjct: 61  FVNLDFRSYLRFLNWM 76


>ref|XP_002331552.1| predicted protein [Populus trichocarpa] gi|222873776|gb|EEF10907.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/76 (55%), Positives = 50/76 (65%)
 Frame = +1

Query: 115 MATFGDIGLSXXXXXXXXXXXXXXXXXXXXQPFNDRVYFPKWYLRRLRDSPSRSGGLVSK 294
           MAT  DIG+S                    QPFNDRVYFPKWYL+ LR+SPSRS  LVS+
Sbjct: 1   MATLEDIGVSAAINLLSALIFLFLFAILRLQPFNDRVYFPKWYLKGLRNSPSRSRALVSR 60

Query: 295 FVNLDLKSYVRFLNWV 342
           FVNLD +SY++FLNW+
Sbjct: 61  FVNLDCRSYIQFLNWM 76


>gb|AAC17615.1| Similar to hypothetical protein HYP1 gb|Z97338 from A. thaliana
           [Arabidopsis thaliana]
          Length = 783

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/76 (53%), Positives = 49/76 (64%)
 Frame = +1

Query: 115 MATFGDIGLSXXXXXXXXXXXXXXXXXXXXQPFNDRVYFPKWYLRRLRDSPSRSGGLVSK 294
           MAT GDIG++                    QPFNDRVYFPKWYL+ +R SP  SG LVSK
Sbjct: 1   MATLGDIGVAAAINILTAIIFLLAFAILRIQPFNDRVYFPKWYLKGIRSSPLHSGALVSK 60

Query: 295 FVNLDLKSYVRFLNWV 342
           FVN++L SY+RFLNW+
Sbjct: 61  FVNVNLGSYLRFLNWM 76


>ref|NP_172660.5| putative ERD4 protein [Arabidopsis thaliana]
           gi|204324149|gb|ACI01072.1| putative membrane protein
           [Arabidopsis thaliana] gi|332190700|gb|AEE28821.1|
           putative ERD4 protein [Arabidopsis thaliana]
          Length = 771

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/76 (53%), Positives = 49/76 (64%)
 Frame = +1

Query: 115 MATFGDIGLSXXXXXXXXXXXXXXXXXXXXQPFNDRVYFPKWYLRRLRDSPSRSGGLVSK 294
           MAT GDIG++                    QPFNDRVYFPKWYL+ +R SP  SG LVSK
Sbjct: 1   MATLGDIGVAAAINILTAIIFLLAFAILRIQPFNDRVYFPKWYLKGIRSSPLHSGALVSK 60

Query: 295 FVNLDLKSYVRFLNWV 342
           FVN++L SY+RFLNW+
Sbjct: 61  FVNVNLGSYLRFLNWM 76


>dbj|BAF98597.1| CM0545.360.nc [Lotus japonicus]
          Length = 755

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/76 (52%), Positives = 47/76 (61%)
 Frame = +1

Query: 115 MATFGDIGLSXXXXXXXXXXXXXXXXXXXXQPFNDRVYFPKWYLRRLRDSPSRSGGLVSK 294
           MA+ GDIGL+                    QP NDRVYFPKWYL+ LR SP + G  VSK
Sbjct: 1   MASLGDIGLAAAINILTAFAFLIAFAVLRIQPINDRVYFPKWYLKGLRSSPLQGGAFVSK 60

Query: 295 FVNLDLKSYVRFLNWV 342
           FVNLD +SY+RFLNW+
Sbjct: 61  FVNLDFRSYIRFLNWM 76


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