BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031244
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japo...    61   8e-08
gb|ABA95357.2| retrotransposon protein, putative, unclassified [...    59   4e-07
gb|AAX95226.1| retrotransposon protein, putative, unclassified [...    58   9e-07
gb|ABA91843.2| retrotransposon protein, putative, unclassified [...    58   9e-07
gb|ABA98602.2| retrotransposon protein, putative, unclassified [...    58   9e-07

>gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japonica Group]
           gi|31433481|gb|AAP54986.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1409

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = +1

Query: 118 VQLTAIE--TEEKGVKHIPQDIQTVIDKHNTIFQAPSGLPPQRKQDHLIPIEEGCRPVNL 291
           VQ+T +   +EE     IP DIQT++ +  T+ +APSGLPP+R  DH+I ++EG  P NL
Sbjct: 572 VQITQVTDVSEEDANSGIPADIQTILQEFPTVLEAPSGLPPRRSCDHVISLKEGATPPNL 631

Query: 292 NP 297
            P
Sbjct: 632 RP 633


>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/61 (44%), Positives = 38/61 (62%)
 Frame = +1

Query: 115  LVQLTAIETEEKGVKHIPQDIQTVIDKHNTIFQAPSGLPPQRKQDHLIPIEEGCRPVNLN 294
            LVQLTA +      +++P  IQ+++D+   IF  P GLPP R  DH IP+  G +PVN+ 
Sbjct: 1957 LVQLTASDGSSSS-QNVPSSIQSILDEFADIFNEPDGLPPSRSYDHTIPLIAGAQPVNIR 2015

Query: 295  P 297
            P
Sbjct: 2016 P 2016


>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1513

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/84 (33%), Positives = 47/84 (55%)
 Frame = +1

Query: 46  KNAKITVNLTDKVIKRTTNQACFLVQLTAIETEEKGVKHIPQDIQTVIDKHNTIFQAPSG 225
           K+  +  +  DK+I++      F +   A E++ +    IP DIQ ++ +  T+ + P G
Sbjct: 564 KHLLVDSSKVDKIIRKGGLGYLFQITQVAEESDVEESISIPDDIQDILQRFPTVLEKPKG 623

Query: 226 LPPQRKQDHLIPIEEGCRPVNLNP 297
           LPPQR  DH+I +++G  P NL P
Sbjct: 624 LPPQRGCDHVITLKDGAIPPNLRP 647


>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1411

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/84 (33%), Positives = 47/84 (55%)
 Frame = +1

Query: 46  KNAKITVNLTDKVIKRTTNQACFLVQLTAIETEEKGVKHIPQDIQTVIDKHNTIFQAPSG 225
           K+  +  +  DK+I++      F +   A E++ +    IP DIQ ++ +  T+ + P G
Sbjct: 462 KHLLVDSSKVDKIIRKGGLGYLFQITQVAEESDVEESISIPDDIQDILQRFPTVLEKPKG 521

Query: 226 LPPQRKQDHLIPIEEGCRPVNLNP 297
           LPPQR  DH+I +++G  P NL P
Sbjct: 522 LPPQRGCDHVITLKDGAIPPNLRP 545


>gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2202

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/61 (42%), Positives = 37/61 (60%)
 Frame = +1

Query: 115  LVQLTAIETEEKGVKHIPQDIQTVIDKHNTIFQAPSGLPPQRKQDHLIPIEEGCRPVNLN 294
            LVQL  +++E      IP +IQ ++     +FQ P GLPP R+ DH IP+  G +PVN+ 
Sbjct: 900  LVQLYTLDSESSSDLPIPDNIQQLLQSFADVFQEPQGLPPVREYDHTIPLIPGAQPVNVR 959

Query: 295  P 297
            P
Sbjct: 960  P 960