BLASTX nr result

ID: Bupleurum21_contig00031235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031235
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ82703.1| potyviral capsid protein interacting protein 2b [...   204   5e-51
ref|XP_002311874.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
gb|ABK94880.1| unknown [Populus trichocarpa]                          204   8e-51
ref|XP_002311798.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
gb|AAQ82702.1| potyviral capsid protein interacting protein 2a [...   202   3e-50

>gb|AAQ82703.1| potyviral capsid protein interacting protein 2b [Nicotiana tabacum]
          Length = 305

 Score =  204 bits (520), Expect = 5e-51
 Identities = 97/136 (71%), Positives = 111/136 (81%)
 Frame = +1

Query: 1   SIRKFKASKTVSDDLGKPAIIEEILKIHIKPGWKKGAMITFPEKGNQKPGLAPADLIIVI 180
           S RK K S+ + DD GKP  +EE+L IHIKPGWKKG  ITFPEKGN +PG  P DLI VI
Sbjct: 142 SRRKMKISRILLDDSGKPTTVEEVLAIHIKPGWKKGTKITFPEKGNYEPGATPGDLIFVI 201

Query: 181 DEKPHSVFKRDGNDLVVHKNISLLEALTGKTIRLTTLDGRDLRIQIADVVKPGHVEVVPN 360
           DEKPH+VFKRDGNDLV+++ ISLL+ALTGKTI L TLDGR+L I I DVVKPGH  ++PN
Sbjct: 202 DEKPHAVFKRDGNDLVINQKISLLDALTGKTISLITLDGRELTIPITDVVKPGHEHIIPN 261

Query: 361 EGMPISKEPGKKGNLR 408
           EGMPISKE GKKGNL+
Sbjct: 262 EGMPISKERGKKGNLK 277


>ref|XP_002311874.1| predicted protein [Populus trichocarpa] gi|222851694|gb|EEE89241.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  204 bits (518), Expect = 8e-51
 Identities = 97/134 (72%), Positives = 112/134 (83%)
 Frame = +1

Query: 7   RKFKASKTVSDDLGKPAIIEEILKIHIKPGWKKGAMITFPEKGNQKPGLAPADLIIVIDE 186
           RK + S++V DD GKP  +EEILKI IKPGWKKG  ITFPEKGNQ+PG+ PADLI V+DE
Sbjct: 156 RKMRISRSVPDDFGKPKTVEEILKIDIKPGWKKGTKITFPEKGNQEPGITPADLIFVVDE 215

Query: 187 KPHSVFKRDGNDLVVHKNISLLEALTGKTIRLTTLDGRDLRIQIADVVKPGHVEVVPNEG 366
           KPHSVFKRDGNDLV+++ ISLLEALTGKTI LTTLDGR L + + D+VKPG   +V NEG
Sbjct: 216 KPHSVFKRDGNDLVINQKISLLEALTGKTIELTTLDGRYLPVPVTDIVKPGQELLVSNEG 275

Query: 367 MPISKEPGKKGNLR 408
           MPISKEP K+GNLR
Sbjct: 276 MPISKEPTKRGNLR 289


>gb|ABK94880.1| unknown [Populus trichocarpa]
          Length = 317

 Score =  204 bits (518), Expect = 8e-51
 Identities = 97/134 (72%), Positives = 112/134 (83%)
 Frame = +1

Query: 7   RKFKASKTVSDDLGKPAIIEEILKIHIKPGWKKGAMITFPEKGNQKPGLAPADLIIVIDE 186
           RK + S++V DD GKP  +EEILKI IKPGWKKG  ITFPEKGNQ+PG+ PADLI V+DE
Sbjct: 156 RKMRISRSVPDDFGKPKTVEEILKIDIKPGWKKGTKITFPEKGNQEPGITPADLIFVVDE 215

Query: 187 KPHSVFKRDGNDLVVHKNISLLEALTGKTIRLTTLDGRDLRIQIADVVKPGHVEVVPNEG 366
           KPHSVFKRDGNDLV+++ ISLLEALTGKTI LTTLDGR L + + D+VKPG   +V NEG
Sbjct: 216 KPHSVFKRDGNDLVINQKISLLEALTGKTIELTTLDGRYLPVPVTDIVKPGQELLVSNEG 275

Query: 367 MPISKEPGKKGNLR 408
           MPISKEP K+GNLR
Sbjct: 276 MPISKEPTKRGNLR 289


>ref|XP_002311798.1| predicted protein [Populus trichocarpa] gi|222851618|gb|EEE89165.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  202 bits (514), Expect = 2e-50
 Identities = 95/134 (70%), Positives = 112/134 (83%)
 Frame = +1

Query: 7   RKFKASKTVSDDLGKPAIIEEILKIHIKPGWKKGAMITFPEKGNQKPGLAPADLIIVIDE 186
           RK + S++V DD GKP  IEEILKI IKPGWKKG  ITFPEKGNQ+PG  PADLI V+DE
Sbjct: 155 RKMRISRSVPDDFGKPKTIEEILKIDIKPGWKKGTKITFPEKGNQEPGTIPADLIFVVDE 214

Query: 187 KPHSVFKRDGNDLVVHKNISLLEALTGKTIRLTTLDGRDLRIQIADVVKPGHVEVVPNEG 366
           KPH VFKRDGNDLVV++ +SLLEALTGKTI LTTLDGR L + ++D+VKPGH  ++ +EG
Sbjct: 215 KPHPVFKRDGNDLVVNQKMSLLEALTGKTIELTTLDGRYLTVPVSDIVKPGHEVLISDEG 274

Query: 367 MPISKEPGKKGNLR 408
           MP+SKEP K+GNLR
Sbjct: 275 MPVSKEPNKRGNLR 288


>gb|AAQ82702.1| potyviral capsid protein interacting protein 2a [Nicotiana tabacum]
          Length = 305

 Score =  202 bits (513), Expect = 3e-50
 Identities = 95/136 (69%), Positives = 110/136 (80%)
 Frame = +1

Query: 1   SIRKFKASKTVSDDLGKPAIIEEILKIHIKPGWKKGAMITFPEKGNQKPGLAPADLIIVI 180
           S RK K S+ + DD GKP  +EE+L IHIKPGWKKG  ITFPEKGN +PG  P DLI VI
Sbjct: 142 SRRKMKISRILLDDSGKPTTVEEVLAIHIKPGWKKGTKITFPEKGNYEPGATPGDLIFVI 201

Query: 181 DEKPHSVFKRDGNDLVVHKNISLLEALTGKTIRLTTLDGRDLRIQIADVVKPGHVEVVPN 360
           DEKPH+VFKRDGNDL +++ ISLL+ALTGKTI L TLDGR+L I I D+VKPGH  ++PN
Sbjct: 202 DEKPHAVFKRDGNDLEINQKISLLDALTGKTISLITLDGRELTIPITDIVKPGHEHIIPN 261

Query: 361 EGMPISKEPGKKGNLR 408
           EGMPISKE GKKGNL+
Sbjct: 262 EGMPISKERGKKGNLK 277


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