BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031222
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group...    99   5e-19
gb|AAS90682.1| pupative polyprotein [Oryza sativa Japonica Group]      93   2e-17
ref|NP_001174195.1| Os05g0126900 [Oryza sativa Japonica Group] g...    93   2e-17
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...    92   6e-17
ref|XP_002445775.1| hypothetical protein SORBIDRAFT_07g025585 [S...    91   1e-16

>gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711344|gb|ABF99139.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1394

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/93 (52%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
 Frame = +1

Query: 1   PDLTHLRVFGCTAFMKIPSVHVRKLDDRSKLVVYLGKEPGTKGKRLYDPKTGAVHVSRDV 180
           P L HLRVFGCTA  KI + H++KLDDRS   VYLG E G+K  RL+DP+ G +HVSRDV
Sbjct: 631 PHLAHLRVFGCTAHAKITTPHLKKLDDRSAPYVYLGVEEGSKAHRLFDPRRGRIHVSRDV 690

Query: 181 VMQEKVFWPW--EQGEDSEVAFPVNYIEISEPA 273
           + +E   W W  + GE   V F V  I +  PA
Sbjct: 691 IFEENAVWQWLGDAGEQVSVEFDVEEI-VESPA 722


>gb|AAS90682.1| pupative polyprotein [Oryza sativa Japonica Group]
          Length = 1404

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/106 (40%), Positives = 62/106 (58%)
 Frame = +1

Query: 1    PDLTHLRVFGCTAFMKIPSVHVRKLDDRSKLVVYLGKEPGTKGKRLYDPKTGAVHVSRDV 180
            P + HLR FGC A +K  + +V+KLDDRSK ++++G EPG+K  R YDP +  VH+SRDV
Sbjct: 707  PAVHHLRTFGCLAHVKTTTPNVKKLDDRSKPMIFVGYEPGSKAYRCYDPASRRVHISRDV 766

Query: 181  VMQEKVFWPWEQGEDSEVAFPVNYIEISEPAYTGDNVETEQEPITP 318
               E+  W W+    SE+ F + Y  +  PA         ++P  P
Sbjct: 767  AFDEEAQWRWDGETASELDFTIEYTTVYHPAVVNAPRADSEQPELP 812


>ref|NP_001174195.1| Os05g0126900 [Oryza sativa Japonica Group]
           gi|255675982|dbj|BAH92923.1| Os05g0126900 [Oryza sativa
           Japonica Group]
          Length = 742

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/106 (40%), Positives = 62/106 (58%)
 Frame = +1

Query: 1   PDLTHLRVFGCTAFMKIPSVHVRKLDDRSKLVVYLGKEPGTKGKRLYDPKTGAVHVSRDV 180
           P + HLR FGC A +K  + +V+KLDDRSK ++++G EPG+K  R YDP +  VH+SRDV
Sbjct: 45  PAVHHLRTFGCLAHVKTTTPNVKKLDDRSKPMIFVGYEPGSKAYRCYDPASRRVHISRDV 104

Query: 181 VMQEKVFWPWEQGEDSEVAFPVNYIEISEPAYTGDNVETEQEPITP 318
              E+  W W+    SE+ F + Y  +  PA         ++P  P
Sbjct: 105 AFDEEAQWRWDGETASELDFTIEYTTVYHPAVVNAPRADSEQPELP 150


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1409

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/90 (50%), Positives = 55/90 (61%)
 Frame = +1

Query: 1   PDLTHLRVFGCTAFMKIPSVHVRKLDDRSKLVVYLGKEPGTKGKRLYDPKTGAVHVSRDV 180
           P L HL+VFGCTA  K    H++KLDDRS   VYLG E G+K  RL+DP+ G +HVSRDV
Sbjct: 694 PQLGHLKVFGCTAHAKNTQPHLKKLDDRSAPYVYLGVEEGSKAHRLFDPRRGRIHVSRDV 753

Query: 181 VMQEKVFWPWEQGEDSEVAFPVNYIEISEP 270
           V +E V W W      E   P ++    EP
Sbjct: 754 VFEENVPWEWTSAAGQE---PTDFAMEEEP 780


>ref|XP_002445775.1| hypothetical protein SORBIDRAFT_07g025585 [Sorghum bicolor]
           gi|241942125|gb|EES15270.1| hypothetical protein
           SORBIDRAFT_07g025585 [Sorghum bicolor]
          Length = 841

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 1   PDLTHLRVFGCTAFMKIPSVHVRKLDDRSKLVVYLGKEPGTKGKRLYDPKTGAVHVSRDV 180
           P + HLR FGC A +K+ + H++KLDDRS+ +V++G EPG+K   +YDP T  +H+SRDV
Sbjct: 121 PAVEHLRTFGCIAHVKVNTPHLKKLDDRSRRMVFVGYEPGSKAYHVYDPTTRRLHISRDV 180

Query: 181 VMQEKVFWPWEQGEDSEVA-FPVNYIEISEPAY--TGDNVETEQEPITP 318
           V +E   W W  G+D     F V   E +EP+   T   V +   P  P
Sbjct: 181 VFEEAAQWAWGPGDDVGTGDFVVEEPESTEPSLVTTTRTVASHAPPSAP 229