BLASTX nr result

ID: Bupleurum21_contig00031217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031217
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
emb|CBI14936.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002511307.1| conserved hypothetical protein [Ricinus comm...   100   1e-19

>ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|222868633|gb|EEF05764.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score =  109 bits (273), Expect = 2e-22
 Identities = 77/179 (43%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
 Frame = +2

Query: 2   RQRNFEGFGGEIVTKSVKNKXXXXXXXXXXXXXPATA--VQKWFSNILKPSDPTSQXXXX 175
           R R+ E F GEI+TKS K+              P+ A   Q WFSNILKP    S     
Sbjct: 141 RHRSKEAFSGEILTKSAKHSRNKSESLVETPAEPSPASQFQGWFSNILKPP---SNFNAP 197

Query: 176 XXXXXXXRLSTHRRSRFETPSLPDPNSQFLPPRQSFHRKSRFQSDPALSQPLGIPPQPVT 355
                   LS  R S      L DP +  LPPRQS +RKSRFQ++P  +   GIP    +
Sbjct: 198 VPDPSSPHLSNDRSS-----PLLDPPALNLPPRQSSYRKSRFQTEPPATTAQGIPA--TS 250

Query: 356 KRTFAPTP---DPTRLLSPPKHLTESAHRRSISSSTCALPEKQGRI---NVVETGHRRS 514
           +RTF P P       LLSPPK+L ESA RRSISS+ C+ PE Q      N++E+ HRRS
Sbjct: 251 RRTFKPAPILRQDIHLLSPPKNLIESAQRRSISSNKCSKPETQPLSPPKNLMESSHRRS 309


>emb|CBI14936.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  102 bits (253), Expect = 4e-20
 Identities = 66/137 (48%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
 Frame = +2

Query: 119 KWFSNILKPSDPTSQXXXXXXXXXXXRLSTHRRSRFETPSLPDPNSQFLPPRQSFHRKSR 298
           KWFSNILKPS+P                         + +LP+P  Q LPPR S +RKSR
Sbjct: 11  KWFSNILKPSNPAPP----------------------SSNLPNPTPQTLPPRLSANRKSR 48

Query: 299 FQSDPALSQPLGIPPQPV-TKRTF-APTPDPTRLLSPPKHLTESAHRRSISSSTCALPEK 472
           FQ D +    L IP     +KRTF AP    T LLSPPK+L ESA RRSISSSTC+LPE 
Sbjct: 49  FQDDSSGPHSLPIPAAAAQSKRTFKAPAAPDTHLLSPPKNLIESARRRSISSSTCSLPEN 108

Query: 473 ---QGRINVVETGHRRS 514
                  N+VE+ HRRS
Sbjct: 109 PVLSPPRNLVESAHRRS 125


>ref|XP_002511307.1| conserved hypothetical protein [Ricinus communis]
           gi|223550422|gb|EEF51909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 648

 Score =  100 bits (249), Expect = 1e-19
 Identities = 74/204 (36%), Positives = 102/204 (50%), Gaps = 34/204 (16%)
 Frame = +2

Query: 2   RQRNFEGFGGEIVTKSVKN-----KXXXXXXXXXXXXXPATAVQKWFSNILKPSDPTSQX 166
           R R  EGF GEI+ KS K+     +             PA+ VQ+WFSNILKPS+P    
Sbjct: 138 RHRAVEGFSGEILIKSAKHIRNKSESLDNLPISPSEPSPASQVQEWFSNILKPSNP---- 193

Query: 167 XXXXXXXXXXRLSTHRRSRFETPSLPDPNSQFLPPRQSFHRKSRFQSDPALSQPLGIPPQ 346
                       +T++ +   TP   DP +  +PPRQS +RKSRFQ++     PLGI   
Sbjct: 194 ------------NTNQSNDSSTPLTLDPMTLNVPPRQSTYRKSRFQTEHHAPGPLGISVP 241

Query: 347 PVTKRTFAPTPDP-TRLLSPPKHL---------------------------TESAHRRSI 442
             ++RTF P P P T+LLSPPK+L                            ESAHRRSI
Sbjct: 242 --SRRTFKPAPVPDTQLLSPPKNLIESAHRRSISSTYAQLEDQPLSPPRNLVESAHRRSI 299

Query: 443 SSSTCALPEK-QGRINVVETGHRR 511
           + STC++ E+   + NV+ +G ++
Sbjct: 300 TRSTCSINERIPPKPNVLISGRQK 323


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