BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031205
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
emb|CBI23204.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi...   141   6e-32

>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/108 (71%), Positives = 89/108 (82%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           IVSGHAQNG L + + L NEMR A  RPDS+TVVSLLQACASIGA HQGKWIH+FV ++ 
Sbjct: 420 IVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSC 479

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGYGS 331
           +G  IL+DT LVDMY KCG+L S +KCFDRM Q D+VSWS+IIAGYGS
Sbjct: 480 LGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGS 527



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/108 (35%), Positives = 61/108 (56%)
 Frame = +2

Query: 2   TVIVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIR 181
           T ++SG  QN      + +   M  +   P + T+ S+L ACA +G++  G  +H +++R
Sbjct: 317 TAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILR 376

Query: 182 NGIGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
             I   I    +LV MY KCG+LE     FDRM + D+VSW+ I++G+
Sbjct: 377 QRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGH 424



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/105 (36%), Positives = 62/105 (59%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           +VSG+AQ G++ + + LL  M+     PD  T  SL+ A A       GK +H  ++R G
Sbjct: 218 LVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAG 277

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAG 322
           +     ++T+L+ MY KCGN+ S  + F+ M+  DV+SW+ +I+G
Sbjct: 278 LEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISG 322



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/79 (39%), Positives = 46/79 (58%)
 Frame = +2

Query: 89  PDSVTVVSLLQACASIGAYHQGKWIHSFVIRNGIGSSILVDTTLVDMYFKCGNLESGRKC 268
           PD+ T  SL++AC S+  +  G   H  VI +G  S   + T+L++ Y K G+ +S RK 
Sbjct: 46  PDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKV 105

Query: 269 FDRMLQHDVVSWSTIIAGY 325
           FD M   +VV W+T+I  Y
Sbjct: 106 FDTMDDRNVVPWTTMIGCY 124



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/108 (27%), Positives = 60/108 (55%)
 Frame = +2

Query: 2   TVIVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIR 181
           T ++  + + G+      + N MR    +P SVT++ LL     +      + +H+ VI+
Sbjct: 118 TTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQ 174

Query: 182 NGIGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
            G GS + +  +++++Y KCG +E  +  F+ M   DV+SW+++++GY
Sbjct: 175 YGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGY 222


>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/108 (71%), Positives = 89/108 (82%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           IVSGHAQNG L + + L NEMR A  RPDS+TVVSLLQACASIGA HQGKWIH+FV ++ 
Sbjct: 420 IVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSC 479

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGYGS 331
           +G  IL+DT LVDMY KCG+L S +KCFDRM Q D+VSWS+IIAGYGS
Sbjct: 480 LGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGS 527



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/108 (35%), Positives = 61/108 (56%)
 Frame = +2

Query: 2   TVIVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIR 181
           T ++SG  QN      + +   M  +   P + T+ S+L ACA +G++  G  +H +++R
Sbjct: 317 TAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILR 376

Query: 182 NGIGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
             I   I    +LV MY KCG+LE     FDRM + D+VSW+ I++G+
Sbjct: 377 QRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGH 424



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/105 (36%), Positives = 62/105 (59%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           +VSG+AQ G++ + + LL  M+     PD  T  SL+ A A       GK +H  ++R G
Sbjct: 218 LVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAG 277

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAG 322
           +     ++T+L+ MY KCGN+ S  + F+ M+  DV+SW+ +I+G
Sbjct: 278 LEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISG 322



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/79 (39%), Positives = 46/79 (58%)
 Frame = +2

Query: 89  PDSVTVVSLLQACASIGAYHQGKWIHSFVIRNGIGSSILVDTTLVDMYFKCGNLESGRKC 268
           PD+ T  SL++AC S+  +  G   H  VI +G  S   + T+L++ Y K G+ +S RK 
Sbjct: 46  PDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKV 105

Query: 269 FDRMLQHDVVSWSTIIAGY 325
           FD M   +VV W+T+I  Y
Sbjct: 106 FDTMDDRNVVPWTTMIGCY 124



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/108 (27%), Positives = 60/108 (55%)
 Frame = +2

Query: 2   TVIVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIR 181
           T ++  + + G+      + N MR    +P SVT++ LL     +      + +H+ VI+
Sbjct: 118 TTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQ 174

Query: 182 NGIGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
            G GS + +  +++++Y KCG +E  +  F+ M   DV+SW+++++GY
Sbjct: 175 YGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGY 222


>ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/107 (62%), Positives = 84/107 (78%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           IV+GHA+NG L +G+   NEMR +  RPDS+TV SLLQAC S GA  QGKWIH+FV+R+ 
Sbjct: 421 IVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGYG 328
           +   I+ +T LVDMYFKCGNLE+ +KCFD MLQ D+V+WST+I GYG
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYG 527



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/108 (35%), Positives = 61/108 (56%)
 Frame = +2

Query: 2   TVIVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIR 181
           T ++SG  QN    + + +  +M  +  +P + T+ S L ACA +G    G  IH +V+R
Sbjct: 318 TAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLR 377

Query: 182 NGIGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
            GI   I    +LV MY KC  L+     F++M++ D+VSW+ I+AG+
Sbjct: 378 QGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGH 425



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/106 (32%), Positives = 56/106 (52%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           +VS  +  G  +Q +     M+    + D+ T  SL +AC ++  +  G  +H  V+ NG
Sbjct: 20  LVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNG 79

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
           +     + ++L+  Y K G +  GRK FD ML+ +VV W+TII  Y
Sbjct: 80  LSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSY 125



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/108 (27%), Positives = 61/108 (56%)
 Frame = +2

Query: 2   TVIVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIR 181
           T I+  +++ GD+     +  +MR +  +P SVT++SLL   + +        +H  +I 
Sbjct: 119 TTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLL---LCLHCLIIL 175

Query: 182 NGIGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
           +G  S + +  ++V+MY KCG +   R+ F+ +   D+VSW+++++ Y
Sbjct: 176 HGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAY 223



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           ++S +++ G   + + LL  M++   +PD  T  S L A A  G    GK +H  ++++G
Sbjct: 219 LLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDG 278

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAG 322
           +     V++ LV +Y +C  L+   K F    + DVV W+ +I+G
Sbjct: 279 LNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISG 323


>ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/107 (62%), Positives = 84/107 (78%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           IV+GHA+NG L +G+   NEMR +  RPDS+TV SLLQAC S GA  QGKWIH+FV+R+ 
Sbjct: 421 IVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGYG 328
           +   I+ +T LVDMYFKCGNLE+ +KCFD MLQ D+V+WST+I GYG
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYG 527



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/108 (35%), Positives = 61/108 (56%)
 Frame = +2

Query: 2   TVIVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIR 181
           T ++SG  QN    + + +  +M  +  +P + T+ S L ACA +G    G  IH +V+R
Sbjct: 318 TAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLR 377

Query: 182 NGIGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
            GI   I    +LV MY KC  L+     F++M++ D+VSW+ I+AG+
Sbjct: 378 QGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGH 425



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/106 (32%), Positives = 56/106 (52%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           +VS  +  G  +Q +     M+    + D+ T  SL +AC ++  +  G  +H  V+ NG
Sbjct: 20  LVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNG 79

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
           +     + ++L+  Y K G +  GRK FD ML+ +VV W+TII  Y
Sbjct: 80  LSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSY 125



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/108 (27%), Positives = 60/108 (55%)
 Frame = +2

Query: 2   TVIVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIR 181
           T I+  +++ GD+     +  +MR +  +P SVT++SLL   + +        +H  +I 
Sbjct: 119 TTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLL---LCLHCLIIL 175

Query: 182 NGIGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
           +G  S + +  ++V+MY KCG +   R+ F  +   D+VSW+++++ Y
Sbjct: 176 HGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAY 223



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           ++S +++ G   + + LL  M++   +PD  T  S L A A  G    GK +H  ++++G
Sbjct: 219 LLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDG 278

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAG 322
           +     V++ LV +Y +C  L+   K F    + DVV W+ +I+G
Sbjct: 279 LNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISG 323


>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/107 (60%), Positives = 83/107 (77%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           +V+G+AQNG + + + L NEMR     PDS+T+VSLLQ CAS G  H GKWIHSFVIRNG
Sbjct: 433 MVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNG 492

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGYG 328
           +   ILVDT+LVDMY KCG+L++ ++CF++M  HD+VSWS II GYG
Sbjct: 493 LRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYG 539



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/108 (32%), Positives = 62/108 (57%)
 Frame = +2

Query: 2   TVIVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIR 181
           T ++SG  QNG   + + +  +M     +P + T+ S++ ACA +G+Y+ G  I  +++R
Sbjct: 330 TAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILR 389

Query: 182 NGIGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
             +   +    +LV MY KCG+L+     FD M + D+VSW+ ++ GY
Sbjct: 390 QELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGY 437



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/108 (34%), Positives = 62/108 (57%)
 Frame = +2

Query: 2   TVIVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIR 181
           T I+  +++ G + +   L +EMR    +P SVTV+SLL   + +      + +H   I 
Sbjct: 131 TTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHV---QCLHGCAIL 187

Query: 182 NGIGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
            G  S I +  +++++Y KCGN+E  RK FD M   D+VSW+++I+ Y
Sbjct: 188 YGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAY 235



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/105 (31%), Positives = 56/105 (53%)
 Frame = +2

Query: 8   IVSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNG 187
           ++S +AQ G++ + + LL  MRL        T  S+L   AS G    G+ +H  ++R G
Sbjct: 231 LISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAG 290

Query: 188 IGSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAG 322
                 V+T+L+ +Y K G ++   + F+R    DVV W+ +I+G
Sbjct: 291 FYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISG 335



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/105 (28%), Positives = 54/105 (51%)
 Frame = +2

Query: 11  VSGHAQNGDLYQGMCLLNEMRLALNRPDSVTVVSLLQACASIGAYHQGKWIHSFVIRNGI 190
           ++ H+  G  +Q +     M       D+ T  SLL+AC+ +  +  G  +H  ++ +G+
Sbjct: 33  INHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGL 92

Query: 191 GSSILVDTTLVDMYFKCGNLESGRKCFDRMLQHDVVSWSTIIAGY 325
                + ++L++ Y K G  +  RK FD M + +VV W+TII  Y
Sbjct: 93  SLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCY 137