BLASTX nr result

ID: Bupleurum21_contig00031195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031195
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBJ55931.1| ethylene response factor 1 [Bupleurum kaoi]           180   1e-43
ref|XP_002306842.1| AP2/ERF domain-containing transcription fact...    85   5e-15
gb|ADJ67439.1| ethylene response factor 10 [Actinidia deliciosa]       81   1e-13
gb|ADE41122.1| AP2 domain class transcription factor [Malus x do...    81   1e-13
gb|AAM63284.1| ethylene response factor ERF1 [Arabidopsis thaliana]    79   4e-13

>emb|CBJ55931.1| ethylene response factor 1 [Bupleurum kaoi]
          Length = 210

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/89 (96%), Positives = 88/89 (98%)
 Frame = -2

Query: 270 MDTNFSPEYSSGSIPDTFRSYDLDFDITSLPFDFNDSEEMLLFGILSENAPQPHSSSEIK 91
           MDTNFSPEYSSGSIPD+F SYDLDFDITSLPFDFNDSEEMLLFGILSENAP+PHSSSEIK
Sbjct: 1   MDTNFSPEYSSGSIPDSFGSYDLDFDITSLPFDFNDSEEMLLFGILSENAPEPHSSSEIK 60

Query: 90  EEDTSLSPKNVENKKEKAYRGVRRRPWGK 4
           EEDTSLSPKNVENKKEKAYRGVRRRPWGK
Sbjct: 61  EEDTSLSPKNVENKKEKAYRGVRRRPWGK 89


>ref|XP_002306842.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222856291|gb|EEE93838.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 228

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 49/94 (52%), Positives = 66/94 (70%), Gaps = 5/94 (5%)
 Frame = -2

Query: 270 MDTNFSPEYSSGSIPDTFRSYDLDFDITSLPFDFNDSEEMLLFGILSENAP----QPHSS 103
           ++++FSPE S GS+ D+F   +L F   SLPF+ NDSEEM+LF  L+   P    + +SS
Sbjct: 12  LNSDFSPECSFGSL-DSFSWDELLFQSNSLPFNTNDSEEMVLFNALANGPPKESSESNSS 70

Query: 102 SEIKEED-TSLSPKNVENKKEKAYRGVRRRPWGK 4
           S IKEE+ TS + +  E K+EK+YRGVRRRPWGK
Sbjct: 71  SGIKEEEVTSNAKEEEEAKREKSYRGVRRRPWGK 104


>gb|ADJ67439.1| ethylene response factor 10 [Actinidia deliciosa]
          Length = 216

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
 Frame = -2

Query: 255 SPEYSSGSIPDTFRSYDLDFDITSLPFDFNDSEEMLLFGILSENAPQPHS----SSEIKE 88
           SPE S GS P +F   DL F   SLPF+ NDSEEMLL G+L+E A +  S    S  IKE
Sbjct: 14  SPESSLGS-PQSFSWDDLLFYHNSLPFNVNDSEEMLLLGVLAEGASKESSETISSGGIKE 72

Query: 87  EDTSLSPKNVENKKEKAYRGVRRRPWGK 4
           E+ +   K+ +  KEK+YRGVRRRPWGK
Sbjct: 73  EEVTSVAKDQKPIKEKSYRGVRRRPWGK 100


>gb|ADE41122.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 229

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 6/101 (5%)
 Frame = -2

Query: 288 FSWISAMDTNFSPEYSSGSIPDTFRSYD-LDFDITSLPFDFNDSEEMLLFGILSENAPQP 112
           +S   + ++N SPE S GS   +F   D L F   SLPF+ NDSEEMLL+G++SE   + 
Sbjct: 3   YSTFDSPNSNLSPESSFGS---SFSWDDGLKFGNNSLPFNENDSEEMLLYGLISEGTQEI 59

Query: 111 HSS-----SEIKEEDTSLSPKNVENKKEKAYRGVRRRPWGK 4
            SS     + IKEE+ S + +    KKEK+YRGVRRRPWGK
Sbjct: 60  TSSVSVFANPIKEEEVSSASEEENPKKEKSYRGVRRRPWGK 100


>gb|AAM63284.1| ethylene response factor ERF1 [Arabidopsis thaliana]
          Length = 218

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/88 (48%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = -2

Query: 264 TNFSPEYSSGSIPDTFRSYDLDFDITSLPFDFNDSEEMLLFGILSENAPQPHSSSEIKEE 85
           + FSPEYS GS P++F S   +    SLPF+ NDSEEM L+G++ ++  Q +  SE+++ 
Sbjct: 11  SGFSPEYSIGSSPESFSSSSSNN--YSLPFNENDSEEMFLYGLIEQSTQQTYIDSELQD- 67

Query: 84  DTSLSPKNVENKK-EKAYRGVRRRPWGK 4
              L  K+V ++K EK+YRGVRRRPWGK
Sbjct: 68  ---LPIKSVSSRKSEKSYRGVRRRPWGK 92


Top