BLASTX nr result

ID: Bupleurum21_contig00031178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031178
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putat...   130   9e-29
ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   128   4e-28
ref|XP_002299762.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_004140175.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   123   2e-26
ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   122   4e-26

>ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 889

 Score =  130 bits (328), Expect = 9e-29
 Identities = 61/92 (66%), Positives = 73/92 (79%)
 Frame = +3

Query: 18  FYRTDEKATSRGSEIVMNERISCTIVPCRLNVIVCWTDKMVERRSTHLLSSLPETFKSGF 197
           FY TDEK   +  +I +NE +  T VP R NV+VCWT+K +E+  T LLSSLPE FKSGF
Sbjct: 671 FYITDEKGIVQDLKIGINEPVPVTGVPKRFNVLVCWTEKQIEQYDTRLLSSLPEVFKSGF 730

Query: 198 LSKRTQESVSLYRCLEAFLKEEPLGPEDMWYC 293
           L+KR QESVSLY+CLEAFLKEEPLGP+DMW+C
Sbjct: 731 LAKRPQESVSLYKCLEAFLKEEPLGPDDMWFC 762


>ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
           vinifera]
          Length = 882

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/92 (64%), Positives = 76/92 (82%)
 Frame = +3

Query: 18  FYRTDEKATSRGSEIVMNERISCTIVPCRLNVIVCWTDKMVERRSTHLLSSLPETFKSGF 197
           FY TD+K  +R S++VM+E +  T +P RLN++V W +K +E+  THL+SSLPE FKSGF
Sbjct: 666 FYLTDDKGATRASKLVMDEPV--TRLPRRLNLLVFWPEKKIEQYDTHLISSLPEIFKSGF 723

Query: 198 LSKRTQESVSLYRCLEAFLKEEPLGPEDMWYC 293
           +++R QESVSLYRCLEAFLKEEPLGP+DMWYC
Sbjct: 724 IARRPQESVSLYRCLEAFLKEEPLGPDDMWYC 755


>ref|XP_002299762.1| predicted protein [Populus trichocarpa] gi|222847020|gb|EEE84567.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/97 (60%), Positives = 71/97 (73%)
 Frame = +3

Query: 3   NTDFIFYRTDEKATSRGSEIVMNERISCTIVPCRLNVIVCWTDKMVERRSTHLLSSLPET 182
           +++  FY TDEK   +   IVMNE +    +  R NV+VCW +K+ ++  T LLSSLPE 
Sbjct: 403 DSELQFYLTDEKGMVKDENIVMNEPVPKIGLHRRFNVLVCWPEKLTKQYDTSLLSSLPEI 462

Query: 183 FKSGFLSKRTQESVSLYRCLEAFLKEEPLGPEDMWYC 293
           FKSGF +KR QESVSLY CLEAFLKEEPLGPEDMWYC
Sbjct: 463 FKSGFFAKRPQESVSLYNCLEAFLKEEPLGPEDMWYC 499


>ref|XP_004140175.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
           sativus]
          Length = 877

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/97 (60%), Positives = 71/97 (73%)
 Frame = +3

Query: 3   NTDFIFYRTDEKATSRGSEIVMNERISCTIVPCRLNVIVCWTDKMVERRSTHLLSSLPET 182
           + D  FY TD+K   RGSEI + E +  +    RL V+V W +K +ER  THLL+SLPE 
Sbjct: 655 DADLQFYTTDDKGIIRGSEIEVGEFVVGSEKSKRLYVLVSWPEKQIERYDTHLLTSLPEV 714

Query: 183 FKSGFLSKRTQESVSLYRCLEAFLKEEPLGPEDMWYC 293
           FKS F +KR QESVSLY+CLEAFL+EEPLGPEDMWYC
Sbjct: 715 FKSSFFAKRPQESVSLYKCLEAFLQEEPLGPEDMWYC 751


>ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
           max]
          Length = 872

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/92 (61%), Positives = 73/92 (79%)
 Frame = +3

Query: 18  FYRTDEKATSRGSEIVMNERISCTIVPCRLNVIVCWTDKMVERRSTHLLSSLPETFKSGF 197
           FY TDEK T + S+I+MNE +        L+V+VCW+++ +++ +T L SSLPE FKSGF
Sbjct: 653 FYVTDEKGTIKNSKILMNEPLVINGELRLLHVLVCWSEEQLKKYNTQLCSSLPEVFKSGF 712

Query: 198 LSKRTQESVSLYRCLEAFLKEEPLGPEDMWYC 293
           L+KR QESVSLY+CLEAFL+EEPLGPEDMWYC
Sbjct: 713 LAKRPQESVSLYKCLEAFLQEEPLGPEDMWYC 744


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