BLASTX nr result

ID: Bupleurum21_contig00031165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031165
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...   131   6e-29
ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li...   125   3e-27
ref|XP_002885164.1| hypothetical protein ARALYDRAFT_897993 [Arab...   121   7e-26
ref|NP_188295.2| condensin-2 complex subunit H2 [Arabidopsis tha...   119   3e-25

>ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  134 bits (336), Expect = 1e-29
 Identities = 73/132 (55%), Positives = 89/132 (67%), Gaps = 5/132 (3%)
 Frame = +2

Query: 2   VLHALEFINQQSQSNQPEEDSETVDHSAPDKEGGHRSAPDDQDDLFWASDDIPVEANITL 181
           VLHAL+F++Q+ Q  Q E        S   ++ G ++  DD +D FW SDD+PVE    L
Sbjct: 81  VLHALDFLSQKRQQEQSE------GASVQPEQSGSQAVSDDDNDQFWVSDDVPVEPRNYL 134

Query: 182 DNAACCTSDD-----FVKPPADLLVLEGDCLDASGEGGELESYLLAKCDLYRGFILLDPC 346
           D +   TS D     FVKPPA+L+VLEGDCLD SG+GGELESYLLA  DLYR FILL+PC
Sbjct: 135 DAS---TSKDASFYHFVKPPANLIVLEGDCLDTSGDGGELESYLLATNDLYRDFILLNPC 191

Query: 347 DAADVDDFLKKD 382
           DA  V+DFLK D
Sbjct: 192 DAIAVNDFLKAD 203


>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
           gi|223544047|gb|EEF45573.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 667

 Score =  131 bits (329), Expect = 6e-29
 Identities = 70/131 (53%), Positives = 89/131 (67%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   VLHALEFINQQSQSNQPEEDSETVDHSAPDKEGGHRSAPDDQDDLFWASDDIPVEANITL 181
           VLHAL+F++Q+ Q  Q E  S         ++ G  +A D++ D FW SDD+PVEA  +L
Sbjct: 82  VLHALDFLSQKRQQEQTEGTS------FQPEQNGSNAASDEESDQFWVSDDVPVEARNSL 135

Query: 182 DNAACCTSDD----FVKPPADLLVLEGDCLDASGEGGELESYLLAKCDLYRGFILLDPCD 349
           D  A  + DD    FVKPPA+L+VLEGDCL+ +G+GGEL+SYLLA  DLYR FILLDPCD
Sbjct: 136 D--ASTSKDDSLYHFVKPPANLIVLEGDCLNTTGDGGELDSYLLATNDLYRDFILLDPCD 193

Query: 350 AADVDDFLKKD 382
           A  V+DF   D
Sbjct: 194 ADAVNDFFNGD 204


>ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera]
          Length = 666

 Score =  125 bits (315), Expect = 3e-27
 Identities = 72/136 (52%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
 Frame = +2

Query: 2   VLHALEFINQQSQSNQPEEDSETVDHSAPDKEGGHRSAPDDQDDLFWASDDIPVEANITL 181
           VLHALEF++   Q +Q E     + H    +EGG    PD++DDLFW  DD+PVE    L
Sbjct: 87  VLHALEFVSHTRQQDQLERTP--IQH----EEGGSHVVPDEEDDLFWCLDDVPVEPRNCL 140

Query: 182 DNAAC--CTSDDFVKPPADLLVLEGDCLDASGEGGELESYLLAKCDLYRGFILLDPCDAA 355
           D+      + + FVK PA+L+VLEGD   A+G+GGEL+SYLLA  DLYR FILLDPCDA 
Sbjct: 141 DSTTSKDASLNQFVKAPANLVVLEGD---ATGDGGELDSYLLATNDLYRDFILLDPCDAV 197

Query: 356 DVDDFLK--KDRKTVN 397
            VD FLK  KD K +N
Sbjct: 198 AVDSFLKGDKDSKGLN 213


>ref|XP_002885164.1| hypothetical protein ARALYDRAFT_897993 [Arabidopsis lyrata subsp.
           lyrata] gi|297331004|gb|EFH61423.1| hypothetical protein
           ARALYDRAFT_897993 [Arabidopsis lyrata subsp. lyrata]
          Length = 683

 Score =  121 bits (303), Expect = 7e-26
 Identities = 66/130 (50%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
 Frame = +2

Query: 2   VLHALEFINQQSQSNQPEEDSETVDHSAPDKEGGHRSAPDDQDDLFWASDDIPVEANITL 181
           VL  LEF+++Q    Q +  S   + S+       R   ++++DLFW  DDIPV+    L
Sbjct: 85  VLRTLEFLSKQRDQEQSKGTSNEAEASSS------RQVDEEENDLFWNVDDIPVDTKNRL 138

Query: 182 DNAA---CCTSDDFVKPPADLLVLEGDCLDASGEGGELESYLLAKCDLYRGFILLDPCDA 352
           D++     C S  FVKPPA+L+VLEGDCLD SG+GGELESYLLA   LYR FILLDPCDA
Sbjct: 139 DSSVGGDTCPSQ-FVKPPANLVVLEGDCLDTSGDGGELESYLLATTHLYRDFILLDPCDA 197

Query: 353 ADVDDFLKKD 382
             V++FL  D
Sbjct: 198 VAVNEFLGDD 207


>ref|NP_188295.2| condensin-2 complex subunit H2 [Arabidopsis thaliana]
           gi|75274279|sp|Q9LUR0.1|CNDH2_ARATH RecName:
           Full=Condensin-2 complex subunit H2; AltName:
           Full=Chromosome-associated protein H2; Short=AtCAP-H2;
           AltName: Full=Non-SMC condensin II complex subunit H2;
           AltName: Full=Protein HYPERSENSITIVE TO EXCESS BORON 2;
           Short=Hypersensitive to excess B 2
           gi|11994628|dbj|BAB02765.1| unnamed protein product
           [Arabidopsis thaliana] gi|62533249|dbj|BAD95574.1|
           chromosoma associate protein subunit H2 [Arabidopsis
           thaliana] gi|110741945|dbj|BAE98913.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332642337|gb|AEE75858.1| condensin-2 complex subunit
           H2 [Arabidopsis thaliana]
          Length = 683

 Score =  119 bits (297), Expect = 3e-25
 Identities = 65/127 (51%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2   VLHALEFINQQSQSNQPEEDSETVDHSAPDKEGGHRSAPDDQDDLFWASDDIPVEANITL 181
           VL  LEF+++Q    Q +  S   + S+       R   ++++DLFW  DDIPV+    L
Sbjct: 85  VLRTLEFLSKQRDQEQSKGTSNENEASSS------RQVDEEENDLFWNVDDIPVDTKNRL 138

Query: 182 DNAA---CCTSDDFVKPPADLLVLEGDCLDASGEGGELESYLLAKCDLYRGFILLDPCDA 352
           D++     C S  FVKPPA+L+VLEGDCLD SG+GGELESYLLA   LYR FILLDPCDA
Sbjct: 139 DSSVGGDTCPSQ-FVKPPANLVVLEGDCLDTSGDGGELESYLLATTHLYRDFILLDPCDA 197

Query: 353 ADVDDFL 373
             V++FL
Sbjct: 198 VAVNEFL 204


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