BLASTX nr result

ID: Bupleurum21_contig00031159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031159
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170311.1| PREDICTED: cellulose synthase-like protein D...    56   3e-06
ref|XP_004144564.1| PREDICTED: cellulose synthase-like protein D...    56   3e-06
ref|XP_003589804.1| Cellulose synthase D-like protein [Medicago ...    55   6e-06

>ref|XP_004170311.1| PREDICTED: cellulose synthase-like protein D4-like, partial
           [Cucumis sativus]
          Length = 536

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/70 (41%), Positives = 41/70 (58%)
 Frame = +1

Query: 46  LSMSKESADEFVGYTVHIPSTPDNRMFPENSGTFSSXXXXXXXXXXXXYIRDTVYTGGFN 225
           L MS E + +++ YTVHIP TPDN+  P  S   S             Y+ ++++TGGFN
Sbjct: 52  LDMSGEISGDYINYTVHIPPTPDNQ--PMESSVISK--------AEEQYVSNSLFTGGFN 101

Query: 226 SETKAHVMSK 255
           S T+AH+M K
Sbjct: 102 SVTRAHLMDK 111


>ref|XP_004144564.1| PREDICTED: cellulose synthase-like protein D4-like [Cucumis
           sativus]
          Length = 1122

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/70 (41%), Positives = 41/70 (58%)
 Frame = +1

Query: 46  LSMSKESADEFVGYTVHIPSTPDNRMFPENSGTFSSXXXXXXXXXXXXYIRDTVYTGGFN 225
           L MS E + +++ YTVHIP TPDN+  P  S   S             Y+ ++++TGGFN
Sbjct: 52  LDMSGEISGDYINYTVHIPPTPDNQ--PMESSVISK--------AEEQYVSNSLFTGGFN 101

Query: 226 SETKAHVMSK 255
           S T+AH+M K
Sbjct: 102 SVTRAHLMDK 111


>ref|XP_003589804.1| Cellulose synthase D-like protein [Medicago truncatula]
           gi|355478852|gb|AES60055.1| Cellulose synthase D-like
           protein [Medicago truncatula]
          Length = 1104

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/70 (37%), Positives = 41/70 (58%)
 Frame = +1

Query: 46  LSMSKESADEFVGYTVHIPSTPDNRMFPENSGTFSSXXXXXXXXXXXXYIRDTVYTGGFN 225
           + MS + A +++ YTVHIP TPDN+    NS    +            Y+ ++++TGGFN
Sbjct: 48  IEMSTDVAGDYMNYTVHIPPTPDNQPMDGNSVAMKA---------EEQYVSNSLFTGGFN 98

Query: 226 SETKAHVMSK 255
           S T+AH+M +
Sbjct: 99  SVTRAHLMDR 108


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