BLASTX nr result

ID: Bupleurum21_contig00031158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031158
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266643.2| PREDICTED: uncharacterized protein LOC100254...    55   4e-06
emb|CBI27544.3| unnamed protein product [Vitis vinifera]               51   5e-06

>ref|XP_002266643.2| PREDICTED: uncharacterized protein LOC100254469 isoform 1 [Vitis
           vinifera] gi|359473704|ref|XP_003631349.1| PREDICTED:
           uncharacterized protein LOC100254469 isoform 2 [Vitis
           vinifera]
          Length = 324

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 52/139 (37%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
 Frame = -2

Query: 439 PDGLLGCFP--------YPFK*WNSVWISPDQLYYWITCPNPRVKCSSGQ-----RSGKH 299
           PDGLLGCFP         P+         P+    W T P   +    GQ     R    
Sbjct: 178 PDGLLGCFPGGGILEVKCPYNKGK-----PEMGLPWSTMPFYYMPQVQGQMEIMGREWVD 232

Query: 298 VY*-TANWSSIF-VKIDSETDI*YKQNLQQFWW*KVYQL*NLHSGGQLKEANLYEPASIH 125
           +Y  T N S+IF V  D          L +FWW  V         G+ +EA LY+PAS H
Sbjct: 233 LYCWTPNGSTIFHVCRDRSYWELIHGILHEFWWESVVPAREALLLGKEEEARLYKPASTH 292

Query: 124 EHTGLVISKSIN*AGEAKL 68
           + TGLVISKSI  A E+KL
Sbjct: 293 KQTGLVISKSIKLAAESKL 311


>emb|CBI27544.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score = 51.2 bits (121), Expect(2) = 5e-06
 Identities = 27/52 (51%), Positives = 33/52 (63%)
 Frame = -2

Query: 223 LQQFWW*KVYQL*NLHSGGQLKEANLYEPASIHEHTGLVISKSIN*AGEAKL 68
           L +FWW  V         G+ +EA LY+PAS H+ TGLVISKSI  A E+KL
Sbjct: 112 LHEFWWESVVPAREALLLGKEEEARLYKPASTHKQTGLVISKSIKLAAESKL 163



 Score = 23.9 bits (50), Expect(2) = 5e-06
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 377 P*STILLDYMPQPQGQM 327
           P ST+   YMPQ QGQM
Sbjct: 59  PWSTMPFYYMPQVQGQM 75


Top