BLASTX nr result

ID: Bupleurum21_contig00031155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031155
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27180.3| unnamed protein product [Vitis vinifera]              207   9e-52
ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   201   8e-50
ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   198   7e-49
ref|XP_002528171.1| rubisco subunit binding-protein alpha subuni...   192   4e-47
ref|XP_003556668.1| PREDICTED: ruBisCO large subunit-binding pro...   188   6e-46

>emb|CBI27180.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  207 bits (528), Expect = 9e-52
 Identities = 104/149 (69%), Positives = 130/149 (87%)
 Frame = +3

Query: 159 NYSKRSSGVWRSKEKMKKSVVIRAGAKRVSFDKECRNGLLSGINKLADAVSVTIGPRGRN 338
           N  +R  G+WR+  ++ +S+ +RAG KR+SFD+ECR GL +GI+KLADAVS+T+GP+GRN
Sbjct: 21  NGEQRVCGLWRNP-RIFRSLRVRAGPKRISFDRECREGLQAGIDKLADAVSLTLGPKGRN 79

Query: 339 VVLSESGNLKVINDGVTIAQAIELPDTIENAGVSLIQEVATKTNDSAGDGTTTAIILARE 518
           V+LSE+G LKVINDGVTIA+AIEL D IENAG +L+QEVA+KTND AGDGTTTAIILARE
Sbjct: 80  VILSEAGTLKVINDGVTIARAIELSDAIENAGATLMQEVASKTNDVAGDGTTTAIILARE 139

Query: 519 IIRSGLVSVAFGANPVSLKNGMEKTVREL 605
           +I+SGL+ VAFGANP+ LK GM+KTVREL
Sbjct: 140 MIKSGLLVVAFGANPIGLKKGMDKTVREL 168


>ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Vitis
           vinifera]
          Length = 602

 Score =  201 bits (511), Expect = 8e-50
 Identities = 99/132 (75%), Positives = 120/132 (90%)
 Frame = +3

Query: 210 KSVVIRAGAKRVSFDKECRNGLLSGINKLADAVSVTIGPRGRNVVLSESGNLKVINDGVT 389
           +S+ +RAG KR+SFD+ECR GL +GI+KLADAVS+T+GP+GRNV+LSE+G LKVINDGVT
Sbjct: 56  RSLRVRAGPKRISFDRECREGLQAGIDKLADAVSLTLGPKGRNVILSEAGTLKVINDGVT 115

Query: 390 IAQAIELPDTIENAGVSLIQEVATKTNDSAGDGTTTAIILAREIIRSGLVSVAFGANPVS 569
           IA+AIEL D IENAG +L+QEVA+KTND AGDGTTTAIILARE+I+SGL+ VAFGANP+ 
Sbjct: 116 IARAIELSDAIENAGATLMQEVASKTNDVAGDGTTTAIILAREMIKSGLLVVAFGANPIG 175

Query: 570 LKNGMEKTVREL 605
           LK GM+KTVREL
Sbjct: 176 LKKGMDKTVREL 187


>ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like
           [Cucumis sativus]
          Length = 587

 Score =  198 bits (503), Expect = 7e-49
 Identities = 103/147 (70%), Positives = 126/147 (85%)
 Frame = +3

Query: 165 SKRSSGVWRSKEKMKKSVVIRAGAKRVSFDKECRNGLLSGINKLADAVSVTIGPRGRNVV 344
           S+R SG  R+   ++ + V+RAG KR+SF KECR  LL+GI+KLADAVSVT+GP+GRNV+
Sbjct: 27  SQRLSGYARNSWNIR-NFVVRAGPKRISFGKECRGALLAGIDKLADAVSVTLGPKGRNVI 85

Query: 345 LSESGNLKVINDGVTIAQAIELPDTIENAGVSLIQEVATKTNDSAGDGTTTAIILAREII 524
           LSE   LKV+NDGVTIA+AIEL D IENAGV LIQEVA+K ND AGDGTTTAIILARE+I
Sbjct: 86  LSEQKTLKVVNDGVTIAKAIELSDAIENAGVVLIQEVASKMNDLAGDGTTTAIILAREMI 145

Query: 525 RSGLVSVAFGANPVSLKNGMEKTVREL 605
           +SGL++V+FGA+PVSLK GM+KTV+EL
Sbjct: 146 KSGLLAVSFGADPVSLKKGMDKTVKEL 172


>ref|XP_002528171.1| rubisco subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis] gi|223532428|gb|EEF34222.1| rubisco
           subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis]
          Length = 556

 Score =  192 bits (488), Expect = 4e-47
 Identities = 95/141 (67%), Positives = 119/141 (84%)
 Frame = +3

Query: 183 VWRSKEKMKKSVVIRAGAKRVSFDKECRNGLLSGINKLADAVSVTIGPRGRNVVLSESGN 362
           ++  K+++   +V++AG KR+ FDKECR  L SGI+KLADAVSVT+GPRGRNVVLS+S  
Sbjct: 1   MFNGKKRIVSKLVVKAGPKRICFDKECREALQSGIDKLADAVSVTLGPRGRNVVLSDSKT 60

Query: 363 LKVINDGVTIAQAIELPDTIENAGVSLIQEVATKTNDSAGDGTTTAIILAREIIRSGLVS 542
           LKV+NDGVTIA+AIEL DT+ENAG  LIQEVA K ND AGDGTTTAIILAR +I+ GL++
Sbjct: 61  LKVVNDGVTIARAIELSDTMENAGAMLIQEVANKMNDLAGDGTTTAIILARAMIKMGLLA 120

Query: 543 VAFGANPVSLKNGMEKTVREL 605
           VAFGANPVSL+ G++ T++EL
Sbjct: 121 VAFGANPVSLRKGLDMTIKEL 141


>ref|XP_003556668.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Glycine max]
          Length = 589

 Score =  188 bits (478), Expect = 6e-46
 Identities = 94/129 (72%), Positives = 114/129 (88%)
 Frame = +3

Query: 219 VIRAGAKRVSFDKECRNGLLSGINKLADAVSVTIGPRGRNVVLSESGNLKVINDGVTIAQ 398
           V+ AG K++ F KECR  L +GI+KLADAVS+T+GP+GRNV+LSESGNLKVINDGVTIA+
Sbjct: 46  VVCAGPKKILFGKECREALQAGIDKLADAVSLTVGPKGRNVILSESGNLKVINDGVTIAR 105

Query: 399 AIELPDTIENAGVSLIQEVATKTNDSAGDGTTTAIILAREIIRSGLVSVAFGANPVSLKN 578
           +IEL D IENAG  LIQEVA+K N+ AGDGT+TAIILAR +I+SGL++VAFGANP+SLK 
Sbjct: 106 SIELSDAIENAGAILIQEVASKMNELAGDGTSTAIILARAMIKSGLLAVAFGANPISLKK 165

Query: 579 GMEKTVREL 605
           GMEKTV+EL
Sbjct: 166 GMEKTVKEL 174


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