BLASTX nr result

ID: Bupleurum21_contig00031133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031133
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632136.1| PREDICTED: cell division control protein 6 h...   376   e-102
emb|CBI15981.3| unnamed protein product [Vitis vinifera]              376   e-102
ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|2...   366   5e-99
ref|XP_002525621.1| cdc6, putative [Ricinus communis] gi|2235350...   347   3e-93
ref|XP_002879226.1| predicted protein [Arabidopsis lyrata subsp....   321   2e-85

>ref|XP_003632136.1| PREDICTED: cell division control protein 6 homolog [Vitis vinifera]
          Length = 497

 Score =  376 bits (965), Expect = e-102
 Identities = 185/289 (64%), Positives = 232/289 (80%), Gaps = 3/289 (1%)
 Frame = +2

Query: 107 SSTNGEVQSNAHSSPQKRM-LRSDSAKQSSPMKVKSPRRFIIDSPNSPASEIKKELAEKF 283
           S ++GEV+S + S+PQKR  +        SP+K KSPRR +  SP +P+ EI+K+   K 
Sbjct: 9   SESSGEVRSGSGSTPQKRRSISGGPISPPSPVKWKSPRRSVNGSPKTPSKEIEKDSDAKA 68

Query: 284 TI--KTPIKKLSDSFLDKPVWNPTDVNQLNAVKEALHVSTDQTTVVCREDEQKRILEFCK 457
           T   K+P+K LS+ FLDK  WNP D  Q++A KEALHVST  +TVVCREDEQ RI++FCK
Sbjct: 69  TRLHKSPMKNLSEIFLDKSKWNPGDSKQMSAAKEALHVSTVPSTVVCREDEQNRIMDFCK 128

Query: 458 QCVEQDKAGSLYVCGLPGTGKSLSMDKIKKSLTDWAHEEGLQPPDVLALNCTSLTNTSDI 637
            C+E +KAGSLY CG PGTGKSLSM+K++++L DWA + G QPPD+L++NCTSLTNT +I
Sbjct: 129 ACIEHEKAGSLYACGCPGTGKSLSMEKVRRALVDWAGQAGFQPPDLLSINCTSLTNTQEI 188

Query: 638 FTRILTGCQPQKKTRCTSSPLRQLQNTYSQNQQSLGMRMTLIIADELDYLITKDRSVLHD 817
           F++IL   QP+KKT+ ++SPL+ L+N YS+ QQS GM+M LIIADELDYLIT+DR+VLHD
Sbjct: 189 FSKILEKHQPRKKTKSSTSPLQHLRNIYSKKQQSSGMKMMLIIADELDYLITRDRTVLHD 248

Query: 818 LFLLTTRPFSRCILIGIANAIDLADRFLPKLQSLNCKPMVVTFRAYSKD 964
           LF+LTT PFS CILIG++NAIDLADRFLPKLQSLNCKPMVVTFRAYSKD
Sbjct: 249 LFMLTTLPFSSCILIGVSNAIDLADRFLPKLQSLNCKPMVVTFRAYSKD 297


>emb|CBI15981.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  376 bits (965), Expect = e-102
 Identities = 185/289 (64%), Positives = 232/289 (80%), Gaps = 3/289 (1%)
 Frame = +2

Query: 107 SSTNGEVQSNAHSSPQKRM-LRSDSAKQSSPMKVKSPRRFIIDSPNSPASEIKKELAEKF 283
           S ++GEV+S + S+PQKR  +        SP+K KSPRR +  SP +P+ EI+K+   K 
Sbjct: 9   SESSGEVRSGSGSTPQKRRSISGGPISPPSPVKWKSPRRSVNGSPKTPSKEIEKDSDAKA 68

Query: 284 TI--KTPIKKLSDSFLDKPVWNPTDVNQLNAVKEALHVSTDQTTVVCREDEQKRILEFCK 457
           T   K+P+K LS+ FLDK  WNP D  Q++A KEALHVST  +TVVCREDEQ RI++FCK
Sbjct: 69  TRLHKSPMKNLSEIFLDKSKWNPGDSKQMSAAKEALHVSTVPSTVVCREDEQNRIMDFCK 128

Query: 458 QCVEQDKAGSLYVCGLPGTGKSLSMDKIKKSLTDWAHEEGLQPPDVLALNCTSLTNTSDI 637
            C+E +KAGSLY CG PGTGKSLSM+K++++L DWA + G QPPD+L++NCTSLTNT +I
Sbjct: 129 ACIEHEKAGSLYACGCPGTGKSLSMEKVRRALVDWAGQAGFQPPDLLSINCTSLTNTQEI 188

Query: 638 FTRILTGCQPQKKTRCTSSPLRQLQNTYSQNQQSLGMRMTLIIADELDYLITKDRSVLHD 817
           F++IL   QP+KKT+ ++SPL+ L+N YS+ QQS GM+M LIIADELDYLIT+DR+VLHD
Sbjct: 189 FSKILEKHQPRKKTKSSTSPLQHLRNIYSKKQQSSGMKMMLIIADELDYLITRDRTVLHD 248

Query: 818 LFLLTTRPFSRCILIGIANAIDLADRFLPKLQSLNCKPMVVTFRAYSKD 964
           LF+LTT PFS CILIG++NAIDLADRFLPKLQSLNCKPMVVTFRAYSKD
Sbjct: 249 LFMLTTLPFSSCILIGVSNAIDLADRFLPKLQSLNCKPMVVTFRAYSKD 297


>ref|XP_002299817.1| predicted protein [Populus trichocarpa] gi|222847075|gb|EEE84622.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  366 bits (939), Expect = 5e-99
 Identities = 184/286 (64%), Positives = 229/286 (80%), Gaps = 7/286 (2%)
 Frame = +2

Query: 128 QSNAHSSPQKRMLRSDS------AKQSSPMKVKSPRRFIIDSPNSPASEIKKELAEKFTI 289
           +SN  ++PQKR LRS++      +  SSP+K KSPRR +  SPN+P + I+K L +K   
Sbjct: 21  RSNGETTPQKRRLRSNADLVMHESPISSPLKRKSPRRCVDSSPNTPTNGIEK-LEKK--C 77

Query: 290 KTPIKK-LSDSFLDKPVWNPTDVNQLNAVKEALHVSTDQTTVVCREDEQKRILEFCKQCV 466
           K+P+KK LS++  +KP WNP DV Q++ VKE LHVST  ++ VCREDEQKR+ +FCK C+
Sbjct: 78  KSPVKKELSNNLSEKPNWNPRDVKQVSVVKEVLHVSTAPSSAVCREDEQKRVFDFCKACI 137

Query: 467 EQDKAGSLYVCGLPGTGKSLSMDKIKKSLTDWAHEEGLQPPDVLALNCTSLTNTSDIFTR 646
           EQ+KAGSLYVCG PGTGKSLSM+K+K+ L DWA E G QPPDVL +NCTSLT TS+IF +
Sbjct: 138 EQEKAGSLYVCGCPGTGKSLSMEKVKQCLVDWAKEAGFQPPDVLTMNCTSLTKTSEIFKK 197

Query: 647 ILTGCQPQKKTRCTSSPLRQLQNTYSQNQQSLGMRMTLIIADELDYLITKDRSVLHDLFL 826
           ++   QP KK   ++SPL+ LQN YSQ Q+SLG +M LIIADELDYLITKDR+VL+DLF+
Sbjct: 198 VMEKNQPGKKINGSTSPLQHLQNLYSQQQKSLGSKMMLIIADELDYLITKDRAVLYDLFM 257

Query: 827 LTTRPFSRCILIGIANAIDLADRFLPKLQSLNCKPMVVTFRAYSKD 964
           LTT PFSRCILIG+ANAIDLADRFLP+L+SLNCKPMV+TFRAYSKD
Sbjct: 258 LTTFPFSRCILIGVANAIDLADRFLPRLKSLNCKPMVITFRAYSKD 303


>ref|XP_002525621.1| cdc6, putative [Ricinus communis] gi|223535057|gb|EEF36739.1| cdc6,
           putative [Ricinus communis]
          Length = 523

 Score =  347 bits (889), Expect = 3e-93
 Identities = 183/292 (62%), Positives = 219/292 (75%), Gaps = 9/292 (3%)
 Frame = +2

Query: 116 NGEVQSNAHS-SPQKRMLRSDSAKQ-------SSPMKVKSPRRFIIDSPNS-PASEIKKE 268
           N  V+SN    +PQKR LRS++          SSP+K KSPRR  + SPN+ P   I+K 
Sbjct: 9   NVAVKSNTEQMTPQKRTLRSNAGAAAVQESPVSSPVKWKSPRRCFVSSPNTTPDVGIEK- 67

Query: 269 LAEKFTIKTPIKKLSDSFLDKPVWNPTDVNQLNAVKEALHVSTDQTTVVCREDEQKRILE 448
                  K+P KKL D  +DK  WNP D+ Q++AVKEALHVST  +TVVCREDEQK++ +
Sbjct: 68  -----MCKSPAKKLCDDLIDKANWNPRDMEQMSAVKEALHVSTAPSTVVCREDEQKKVFD 122

Query: 449 FCKQCVEQDKAGSLYVCGLPGTGKSLSMDKIKKSLTDWAHEEGLQPPDVLALNCTSLTNT 628
           FCK C+EQ+KAGSLYVCG PGTGKSLSM K+K+ L DW  E G Q PDVL++NCTSLTNT
Sbjct: 123 FCKACIEQEKAGSLYVCGCPGTGKSLSMAKVKQQLVDWTKEAGFQCPDVLSMNCTSLTNT 182

Query: 629 SDIFTRILTGCQPQKKTRCTSSPLRQLQNTYSQNQQSLGMRMTLIIADELDYLITKDRSV 808
            +IF++I+    P+K+   +SS L  LQN YSQ+    G +M LIIADELDYLITKDR+V
Sbjct: 183 CEIFSKIIGKNSPRKRNSGSSSHLLHLQNLYSQHHLP-GSKMMLIIADELDYLITKDRAV 241

Query: 809 LHDLFLLTTRPFSRCILIGIANAIDLADRFLPKLQSLNCKPMVVTFRAYSKD 964
           LHDLF+LTT PFSRCILIGIANAIDLADRFLP+LQSLNCKPMV+TFRAYSKD
Sbjct: 242 LHDLFMLTTFPFSRCILIGIANAIDLADRFLPRLQSLNCKPMVITFRAYSKD 293


>ref|XP_002879226.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325065|gb|EFH55485.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 493

 Score =  321 bits (822), Expect = 2e-85
 Identities = 167/292 (57%), Positives = 213/292 (72%), Gaps = 10/292 (3%)
 Frame = +2

Query: 119 GEVQSNAHSSPQKRMLRSDSAKQSS--------PMKVKSPRRFIIDSPNSPASEIKKELA 274
           G ++S   ++ +KR LRSDSA + +         MK KSPRR  I  P +   EIK++  
Sbjct: 7   GGLRSAEVNTSRKRKLRSDSAAEVAGTTVLPVNSMKWKSPRRCAISIPKTSDEEIKEDSN 66

Query: 275 EKFT--IKTPIKKLSDSFLDKPVWNPTDVNQLNAVKEALHVSTDQTTVVCREDEQKRILE 448
              T  + + +K LS     K  WNP D +Q+ AVKEALHVS   +TVVCREDEQ+R+ E
Sbjct: 67  GNLTSPVISAVKNLSVCLDVKSKWNPRDDDQMKAVKEALHVSKAPSTVVCREDEQRRVYE 126

Query: 449 FCKQCVEQDKAGSLYVCGLPGTGKSLSMDKIKKSLTDWAHEEGLQPPDVLALNCTSLTNT 628
           F K C+EQ KAGSLY+CG PGTGKSLSM+K+++   DWA + GL  P+++++NCTSLT T
Sbjct: 127 FVKGCMEQKKAGSLYICGCPGTGKSLSMEKVRQQAEDWAKQAGLPCPEIVSVNCTSLTKT 186

Query: 629 SDIFTRILTGCQPQKKTRCTSSPLRQLQNTYSQNQQSLGMRMTLIIADELDYLITKDRSV 808
           +DIF++IL   +  KK   +SSPL+QLQ+ +SQ QQ    +M LIIADE+DYLIT+DR V
Sbjct: 187 TDIFSKILGNNESGKKANGSSSPLQQLQSLFSQKQQRSSSKMMLIIADEMDYLITRDRGV 246

Query: 809 LHDLFLLTTRPFSRCILIGIANAIDLADRFLPKLQSLNCKPMVVTFRAYSKD 964
           LH+LF+LTT PFSRCILIG+ANAIDLADRFLPKL+SLNCKP+VVTFRAYSKD
Sbjct: 247 LHELFMLTTLPFSRCILIGVANAIDLADRFLPKLKSLNCKPLVVTFRAYSKD 298


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