BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031125
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     251   1e-64
gb|ACB28472.1| polyprotein [Ananas comosus]                           249   4e-64
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...   247   2e-63
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   245   7e-63
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]   231   1e-58

>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  251 bits (641), Expect = 1e-64
 Identities = 126/256 (49%), Positives = 170/256 (66%), Gaps = 6/256 (2%)
 Frame = -3

Query: 756  RNLEWLIADVIFRVDAMLIPLGSCDMVLGMQWLTTLGPVYWDFKQLKMNFFWNDQPVTLK 577
            ++  W +    F  +   +PL   D+VLG+QWL TLGP+ WDF  L+M F  N     L+
Sbjct: 532  KDFTWRMQGYSFTTEVRTLPLDHWDIVLGVQWLATLGPILWDFTYLRMEFTLNGAKYILR 591

Query: 576  GIPTKKVKVLEKGPSQKLLKSAAQLCFLQLVHTNAHFD-----QQVKAEKEVTTYDA-LT 415
            G      KV++     K+L    Q+ FLQL    +          +  ++  +  DA L 
Sbjct: 592  GTAKAGCKVIKGNKLNKILSQEPQVAFLQLYDPESATSVGASLSHIAVDESTSLSDATLQ 651

Query: 414  ALKKQYAVVFSEPKDLPPSRGLVDHQIPIVAGANPVNIRPYRYPLKQKDIIEQLVQEMLD 235
            AL + Y  +F EP  LPP R   DHQIP+ AGA+PV++RPYRY   QKDII+++V+EML 
Sbjct: 652  ALLEAYEDLFIEPTGLPPFRKGFDHQIPVEAGASPVSLRPYRYNSIQKDIIDRMVREMLS 711

Query: 234  RGIIQDSSSPYASPVVLVGKKDGTWRLCIDYRELNRQTVKDKFPIPVIEELMDELAGSVV 55
            +GIIQ+SSSPYASPVVLV KKDG+WRLC+DYR +N+QT+KDK+PIP++E+L+DEL GS  
Sbjct: 712  QGIIQNSSSPYASPVVLVKKKDGSWRLCVDYRGVNKQTIKDKYPIPLLEDLLDELGGSTY 771

Query: 54   FSKLDLRAGYHQMRVH 7
            FSKLDLRAG+HQ+R+H
Sbjct: 772  FSKLDLRAGFHQIRMH 787


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  249 bits (637), Expect = 4e-64
 Identities = 121/262 (46%), Positives = 174/262 (66%), Gaps = 11/262 (4%)
 Frame = -3

Query: 759 CRNLEWLIADVIFRVDAMLIPLGSCDMVLGMQWLTTLGPVYWDFKQLKMNFFWNDQPVTL 580
           CR  +W +  + F+ + +L+PL  CDMVLG+QWL  LGP+ WDF +L+M F +  Q + L
Sbjct: 70  CRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDFSKLRMEFQFQGQKIVL 129

Query: 579 KGIPTKKVKVLEKGPSQKLLKSAAQLCFLQL--VHTNAHFDQQVKAEKEVTTY------- 427
           +G     +K++E    +K++     L  + L  +H        +   ++  T        
Sbjct: 130 RGSSGPSLKIIEGKQLKKMVLDDTALSAVHLCSIHATPQEGNHIATSEDAETTWSGLGKA 189

Query: 426 --DALTALKKQYAVVFSEPKDLPPSRGLVDHQIPIVAGANPVNIRPYRYPLKQKDIIEQL 253
               L  L ++++ +F EP+ LPP R L DH+IP+  G NP+N+RPYRYP  QK  IE+L
Sbjct: 190 YSQQLQLLLEEHSDLFEEPQGLPPVR-LHDHKIPLKEGTNPINVRPYRYPAYQKTEIEKL 248

Query: 252 VQEMLDRGIIQDSSSPYASPVVLVGKKDGTWRLCIDYRELNRQTVKDKFPIPVIEELMDE 73
           VQEML +G+I  S+SPY+SPVVLV KKDG+WRLCIDYR LN  T+KDKFPIP+++EL+DE
Sbjct: 249 VQEMLSQGVITPSNSPYSSPVVLVKKKDGSWRLCIDYRSLNDSTIKDKFPIPLVDELLDE 308

Query: 72  LAGSVVFSKLDLRAGYHQMRVH 7
           L+G+ +FS+LDLR+GYHQ+R+H
Sbjct: 309 LSGAKLFSELDLRSGYHQIRMH 330


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score =  247 bits (630), Expect = 2e-63
 Identities = 126/253 (49%), Positives = 171/253 (67%), Gaps = 4/253 (1%)
 Frame = -3

Query: 756  RNLEWLIADVIFRVDAMLIPLGSCDMVLGMQWLTTLGPVYWDFKQLKMNFFWNDQPVTLK 577
            +   W +    F+ D +LIPL   DMVLG+QWL TLG + W+FK+L+M FF+ +Q V L 
Sbjct: 428  KGFTWKLQSTTFQSDILLIPLQGVDMVLGVQWLETLGRISWEFKKLEMQFFYKNQRVWLH 487

Query: 576  GIPTKKVKVLEKGPSQKLLKSAAQLCFLQLVHTNAHFDQQVKA----EKEVTTYDALTAL 409
            GI T  V+ ++    QK      QL  + +    +  +Q++ +      +V     +  +
Sbjct: 488  GIITGSVRDIKAHKLQKTQADQIQLAMVCVREVVSDEEQEIGSISALTSDVVEESVVQNI 547

Query: 408  KKQYAVVFSEPKDLPPSRGLVDHQIPIVAGANPVNIRPYRYPLKQKDIIEQLVQEMLDRG 229
             +++  VF+EP DLPP R   DH+I ++ GANPVN RPYRY + QKD I+++VQ+M+  G
Sbjct: 548  VEEFPDVFAEPTDLPPFREKHDHKIKLLEGANPVNQRPYRYVVHQKDEIDKIVQDMIKSG 607

Query: 228  IIQDSSSPYASPVVLVGKKDGTWRLCIDYRELNRQTVKDKFPIPVIEELMDELAGSVVFS 49
             IQ SSSP+ASPVVLV KKDGTWRLC+DY ELN  TVKD+F IP+IE+LMDEL GSVVFS
Sbjct: 608  TIQVSSSPFASPVVLVKKKDGTWRLCVDYTELNGMTVKDRFLIPLIEDLMDELGGSVVFS 667

Query: 48   KLDLRAGYHQMRV 10
            K+DLRAGYHQ+R+
Sbjct: 668  KIDLRAGYHQVRM 680


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  245 bits (626), Expect = 7e-63
 Identities = 126/258 (48%), Positives = 172/258 (66%), Gaps = 10/258 (3%)
 Frame = -3

Query: 753  NLEWLIADVIFRVDAMLIPLGSCDMVLGMQWLTTLGPVYWDFKQLKMNFFWNDQPVTLKG 574
            +  W +    F+ D +LIPL   DMVLG+QWL TLG + W+FK+L+M F +N+Q V L G
Sbjct: 450  DFSWKLQTTTFQSDILLIPLQGIDMVLGVQWLETLGRISWEFKKLEMRFKFNNQKVLLHG 509

Query: 573  IPTKKVKVLEKGPSQKLLKSAAQLCFLQLVHTNAHFDQQVKAEKEVTTYDALTA------ 412
            + +  V+ ++    QKL +   QL  L +   +         E E+ T +ALT+      
Sbjct: 510  LTSGSVREVKAQKLQKLQEDQVQLAMLCVQEVSE------STEGELCTINALTSELGEES 563

Query: 411  ----LKKQYAVVFSEPKDLPPSRGLVDHQIPIVAGANPVNIRPYRYPLKQKDIIEQLVQE 244
                +  +Y  +F EP  LPP R   +H+I ++ G+NPVN RPYRY + QK+ I++LV++
Sbjct: 564  VVEEVLNEYPDIFIEPTALPPFREKHNHKIKLLEGSNPVNQRPYRYSIHQKNEIDKLVED 623

Query: 243  MLDRGIIQDSSSPYASPVVLVGKKDGTWRLCIDYRELNRQTVKDKFPIPVIEELMDELAG 64
            +L  G +Q SSSPYASPVVLV KKDGTWRLC+DYRELN  TVKD FPIP+IE+LMDEL G
Sbjct: 624  LLTNGTVQASSSPYASPVVLVKKKDGTWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGG 683

Query: 63   SVVFSKLDLRAGYHQMRV 10
            +V+FSK+DLRAGYHQ+R+
Sbjct: 684  AVIFSKIDLRAGYHQVRM 701


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score =  231 bits (589), Expect = 1e-58
 Identities = 114/240 (47%), Positives = 160/240 (66%)
 Frame = -3

Query: 726  IFRVDAMLIPLGSCDMVLGMQWLTTLGPVYWDFKQLKMNFFWNDQPVTLKGIPTKKVKVL 547
            ++ +D  ++ LG CD+VLG+QWL TLGP+ WDF +L+M F   D+P  L+G+    + ++
Sbjct: 398  LYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFSVWDKPRKLQGMSPTGISLV 457

Query: 546  EKGPSQKLLKSAAQLCFLQLVHTNAHFDQQVKAEKEVTTYDALTALKKQYAVVFSEPKDL 367
            E     K+ +   +   +QL+         ++   E   YD L      Y+ VFSEPK L
Sbjct: 458  EGEKFGKVSRQNKRGLVIQLIDFENSSLLSIETSAEPLIYDLLNL----YSEVFSEPKGL 513

Query: 366  PPSRGLVDHQIPIVAGANPVNIRPYRYPLKQKDIIEQLVQEMLDRGIIQDSSSPYASPVV 187
            PP+R   DH I + +GA PV + PYRYP  QK  IE +V EML  GI++ S SP++SPV+
Sbjct: 514  PPTRNH-DHHIVLHSGAKPVCVGPYRYPYFQKSKIENIVHEMLQSGIVRPSQSPFSSPVL 572

Query: 186  LVGKKDGTWRLCIDYRELNRQTVKDKFPIPVIEELMDELAGSVVFSKLDLRAGYHQMRVH 7
            LV K DG+WRLC+DYR LN++T+K KFPIP+++EL+DEL GS +FSKLDLR+GYHQ+RVH
Sbjct: 573  LVRKHDGSWRLCVDYRALNKETIKVKFPIPIVDELLDELHGSTIFSKLDLRSGYHQIRVH 632