BLASTX nr result

ID: Bupleurum21_contig00031116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031116
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP45178.2| Zinc knuckle family protein [Solanum bulbocastanum]     60   4e-07
ref|XP_003616533.1| hypothetical protein MTR_5g081480 [Medicago ...    41   3e-06

>gb|AAP45178.2| Zinc knuckle family protein [Solanum bulbocastanum]
          Length = 558

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +1

Query: 16  CPWFVFAS-LNFDKTFQIKKLGPAHTCLRQQRGLPLINSGFLASKYVDDFRMNPNWPIPA 192
           C WF++AS  N D+ F IK +GP H+C   QR    I+S F   KY D+F++NP+W +  
Sbjct: 97  CKWFIYASKANEDEPFMIKTIGPDHSC-GNQRENKTIDSEFSTKKYADEFKINPSWGVKE 155

Query: 193 FHKKVL 210
           F   V+
Sbjct: 156 FQAHVM 161


>ref|XP_003616533.1| hypothetical protein MTR_5g081480 [Medicago truncatula]
            gi|355517868|gb|AES99491.1| hypothetical protein
            MTR_5g081480 [Medicago truncatula]
          Length = 939

 Score = 41.2 bits (95), Expect(2) = 3e-06
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
 Frame = +2

Query: 269  KKKRILDGNDAQVLVYEDEGVITLTRKRQKTVKCSKCKKLGHNKRTCKDTQDNCTDADAG 448
            KKKR     +A  LV +D    T  R+ +  +KCS+CK+ GHNK TCK      T+  + 
Sbjct: 735  KKKR---NKEAHELVKDD----TQMRRARWGMKCSRCKQSGHNKSTCKLPPPPTTEGSS- 786

Query: 449  RIIEVTTDEEIAMQQAYNEVMIEMLCDDEAP-----VTIQPTQEIQRQIVITQEAE 601
                  + E  + Q A      +    D  P      T  PTQ + R+   TQ  +
Sbjct: 787  ---NPASGEGSSTQPAQVNSQPQPSSQDAQPTQVTGTTHPPTQRVARRQPTTQRTQ 839



 Score = 35.4 bits (80), Expect(2) = 3e-06
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +1

Query: 226 DFKPPKIEKQPGRPKKKEN 282
           D +PP I KQPGRPKKK N
Sbjct: 721 DLQPPPIRKQPGRPKKKRN 739


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