BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031110
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   367   3e-99
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   355   8e-96
emb|CBI26829.3| unnamed protein product [Vitis vinifera]              354   1e-95
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   317   2e-84
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   309   7e-82

>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
            predicted protein [Populus trichocarpa]
          Length = 639

 Score =  367 bits (941), Expect = 3e-99
 Identities = 186/303 (61%), Positives = 225/303 (74%), Gaps = 1/303 (0%)
 Frame = -1

Query: 906  VCSFERSMLNAPGPCVLFATPGMISGGFSLEVFKHWAPYEENLITLPGYCVAGTVGHKLM 727
            V +F+RS++NAPGPCVLFATPGMISGGFSLEVFK WAP E NLITLPGYCVAGTVGHKLM
Sbjct: 304  VHNFDRSLINAPGPCVLFATPGMISGGFSLEVFKQWAPCEMNLITLPGYCVAGTVGHKLM 363

Query: 726  SGKPTKXXXXXXXXXXXRCKIHQLSFSPHTDAKGIMDLVKFLTPKHVILVHGEKPRMISL 547
            SGKPTK           RC+IHQLSFSPHTD+KGIMDL KFL+P++VILVHGEKP+M+SL
Sbjct: 364  SGKPTKINLDKDTQIDVRCQIHQLSFSPHTDSKGIMDLTKFLSPRNVILVHGEKPKMVSL 423

Query: 546  QGRIQSELGIQSYCPANNEMVSVPSSHYVKADISDTLRRNSKCPNFKFSKTDSTQNSNTD 367
            + RIQ+EL I  Y PAN + V +PS+ YVKA  S+T  R+   PNF+F K     NS+  
Sbjct: 424  KERIQTELRIPCYLPANCDAVHIPSTIYVKAHASNTFIRSCLNPNFRFLKRSKEDNSDQV 483

Query: 366  LNNT-PINPLLVFDDRVPEGILIMDKSKKLKAVHQDEFLQMLGAERHELQYAYCCEVRVI 190
            L NT P  PL V D+RV EGILIM+K KK + VHQD+ L ML  ++H++Q+AYCC  ++ 
Sbjct: 484  LRNTNPTAPLQVNDERVAEGILIMEKGKKARVVHQDDLLLMLRQKKHDVQFAYCCAAQLD 543

Query: 189  NFKNDRNADITEDALPNADKCSLLHLLIVKLANELPEVNIQDCGEHIQVESISISLCLND 10
            N +  RN D   DAL  +DKCS L LL  +L+N    VNI+D GEH+QVES  +S+CL D
Sbjct: 544  NLEETRNRD---DALGLSDKCSSLQLLFKELSNYFSGVNIEDLGEHLQVESFHVSVCLKD 600

Query: 9    NCP 1
            NCP
Sbjct: 601  NCP 603


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  355 bits (911), Expect = 8e-96
 Identities = 180/297 (60%), Positives = 226/297 (76%), Gaps = 3/297 (1%)
 Frame = -1

Query: 906  VCSFERSMLNAPGPCVLFATPGMISGGFSLEVFKHWAPYEENLITLPGYCVAGTVGHKLM 727
            V SF+RS++NAPGPCVLFATPGMISGGFSLEVFK WAP E NL+TLPGYC+AGT+GHKL 
Sbjct: 1553 VRSFDRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGHKLT 1612

Query: 726  SGKPTKXXXXXXXXXXXRCKIHQLSFSPHTDAKGIMDLVKFLTPKHVILVHGEKPRMISL 547
            +GKPTK           RC+IHQLSFSPHTDAKGIMDLVKFL+PKHVILVHGEKP+M SL
Sbjct: 1613 TGKPTKIDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASL 1672

Query: 546  QGRIQSELGIQSYCPANNEMVSVPSSHYVKADISDTLRRNSKCPNFKFSKTDSTQNSNTD 367
            +G+I+S+LGIQ Y PANN+ V +PS+ ++KAD S T  R+S  PNFKF KT S   SN  
Sbjct: 1673 KGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKFVKTISEDKSNLV 1732

Query: 366  LNNTPINPLL-VFDDRVPEGILIMDKSKKLKAVHQDEFLQMLGAERHELQYAYCCEVRVI 190
               T    +L V D+RV EGILI++KSKK K VHQ+E L M+G ++H++Q+AYCC V++ 
Sbjct: 1733 SKETEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDKHDVQFAYCCPVQIG 1792

Query: 189  NFKNDRNAD--ITEDALPNADKCSLLHLLIVKLANELPEVNIQDCGEHIQVESISIS 25
            N +  +  D  ++++ +  +D+CS LHLL  KLA +L   NIQD G+H+QV+SI IS
Sbjct: 1793 NLERTKGMDFALSKNVVSTSDECSWLHLLFAKLATKLGG-NIQDFGQHLQVDSIHIS 1848


>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  354 bits (909), Expect = 1e-95
 Identities = 182/303 (60%), Positives = 222/303 (73%), Gaps = 1/303 (0%)
 Frame = -1

Query: 906  VCSFERSMLNAPGPCVLFATPGMISGGFSLEVFKHWAPYEENLITLPGYCVAGTVGHKLM 727
            V SF+RS++NAPGPCVLFATPGMISGGFSLEVFK WAP E NL+TLPGYC+AGT+GHKL 
Sbjct: 359  VRSFDRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGHKLT 418

Query: 726  SGKPTKXXXXXXXXXXXRCKIHQLSFSPHTDAKGIMDLVKFLTPKHVILVHGEKPRMISL 547
            +GKPTK           RC+IHQLSFSPHTDAKGIMDLVKFL+PKHVILVHGEKP+M SL
Sbjct: 419  TGKPTKIDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASL 478

Query: 546  QGRIQSELGIQSYCPANNEMVSVPSSHYVKADISDTLRRNSKCPNFKFSKTDSTQNSNTD 367
            +G+I+S+LGIQ Y PANN+ V +PS+ ++KAD S T  R+S  PNFKF KT S   SN  
Sbjct: 479  KGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNFKFVKTISEDKSNLV 538

Query: 366  LNNTPINPLL-VFDDRVPEGILIMDKSKKLKAVHQDEFLQMLGAERHELQYAYCCEVRVI 190
               T    +L V D+RV EGILI++KSKK K VHQ+E L M+G ++H++Q+AYCC     
Sbjct: 539  SKETEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDKHDVQFAYCC----- 593

Query: 189  NFKNDRNADITEDALPNADKCSLLHLLIVKLANELPEVNIQDCGEHIQVESISISLCLND 10
                        + +  +D+CS LHLL  KLA +L   NIQD G+H+QV+SI IS+CL D
Sbjct: 594  -----------PNVVSTSDECSWLHLLFAKLATKLGG-NIQDFGQHLQVDSIHISVCLKD 641

Query: 9    NCP 1
             CP
Sbjct: 642  ICP 644


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Cucumis sativus]
          Length = 649

 Score =  317 bits (813), Expect = 2e-84
 Identities = 168/308 (54%), Positives = 213/308 (69%), Gaps = 6/308 (1%)
 Frame = -1

Query: 906  VCSFERSMLNAPGPCVLFATPGMISGGFSLEVFKHWAPYEENLITLPGYCVAGTVGHKLM 727
            V  F+RSM++APGPCVLFATPGMIS GFSLEVFK WAP + NLITLPGYCVAGTVGHKLM
Sbjct: 304  VQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITLPGYCVAGTVGHKLM 363

Query: 726  SGKPTKXXXXXXXXXXXRCKIHQLSFSPHTDAKGIMDLVKFLTPKHVILVHGEKPRMISL 547
            SGKPTK           +C++HQL+FSPHTD+KGIMDLVKFL+PKHVILVHGEKP+M  L
Sbjct: 364  SGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMAVL 423

Query: 546  QGRIQSELGIQSYCPANNEMVSVPSSHYVKADISDTLRRNSKCPNFKFSKTDSTQNSNTD 367
            + RI SELGI  + PANNE VS+ S+  VKA+ S    ++   PNFKF K +       D
Sbjct: 424  KERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLIDPDLKD 483

Query: 366  LN------NTPINPLLVFDDRVPEGILIMDKSKKLKAVHQDEFLQMLGAERHELQYAYCC 205
            L+      +  + PL V DDRV EGIL+M+  KK KA+HQDE L +LG + HE+++A+C 
Sbjct: 484  LSYKAERTSNMLIPLQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHC- 542

Query: 204  EVRVINFKNDRNADITEDALPNADKCSLLHLLIVKLANELPEVNIQDCGEHIQVESISIS 25
              R I F +     + +     + K   L  L  KL+ EL + N+Q+ GE++QVESI++S
Sbjct: 543  --RPIYFGSLDEIHVMDSL---SRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLS 597

Query: 24   LCLNDNCP 1
            +C  +NCP
Sbjct: 598  ICSKENCP 605


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  309 bits (791), Expect = 7e-82
 Identities = 158/256 (61%), Positives = 193/256 (75%), Gaps = 2/256 (0%)
 Frame = -1

Query: 906  VCSFERSMLNAPGPCVLFATPGMISGGFSLEVFKHWAPYEENLITLPGYCVAGTVGHKLM 727
            V +F+RS+L+APGPCVLFATPGMISGGFSLEVFK WAP E NL+TLPGYCVAGT+GHKLM
Sbjct: 304  VYTFDRSLLDAPGPCVLFATPGMISGGFSLEVFKRWAPCEMNLVTLPGYCVAGTIGHKLM 363

Query: 726  SGKPTKXXXXXXXXXXXRCKIHQLSFSPHTDAKGIMDLVKFLTPKHVILVHGEKPRMISL 547
            SGKP+K           RC+IHQLSFSPHTDAKGIMDLVKFL+PKHVILVHGEKP+M SL
Sbjct: 364  SGKPSKINLDKDTQIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASL 423

Query: 546  QGRIQSELGIQSYCPANNEMVSVPSSHYVKADISDTLRRNSKCPNFKFSKTDSTQNSNTD 367
            + RIQSEL IQ Y PAN E + +PS+ +VKAD S+   R+   PNF+F        S+  
Sbjct: 424  KERIQSELEIQCYVPANCETLCIPSTLFVKADASEAFIRSCLSPNFRFLNKSLKDTSDLV 483

Query: 366  LNNT-PINPLLVFDDRVPEGILIMDKSKKLKAVHQDEFLQMLGAERHELQYAYCCEVRVI 190
            L++T   + L V D+RV EGIL+++K+KK + VHQDE L MLGA++HE+Q+AYCC V+V 
Sbjct: 484  LHSTNATSRLEVSDERVAEGILVVEKNKKARVVHQDELLLMLGAKQHEVQFAYCCPVQVD 543

Query: 189  NF-KNDRNADITEDAL 145
            N  +  R+   T D L
Sbjct: 544  NMDQTRRDPSSTHDEL 559