BLASTX nr result

ID: Bupleurum21_contig00031104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031104
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278693.1| PREDICTED: uncharacterized protein LOC100257...    67   1e-11
ref|NP_193220.1| uncharacterized protein [Arabidopsis thaliana] ...    58   9e-09
ref|NP_188891.1| uncharacterized protein [Arabidopsis thaliana] ...    60   3e-08
ref|XP_002868246.1| hypothetical protein ARALYDRAFT_493410 [Arab...    56   9e-08

>ref|XP_002278693.1| PREDICTED: uncharacterized protein LOC100257987 [Vitis vinifera]
          Length = 492

 Score = 67.4 bits (163), Expect(2) = 1e-11
 Identities = 41/118 (34%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
 Frame = -2

Query: 403 YSPLETNIAWATTLENEYDDSKGYESLLRAELDYNSQ---------KVKKLQDQIAALNQ 251
           ++ L +++  AT+L NEY+ SK  E +   ++D NS          ++ KLQ + A L+ 
Sbjct: 369 FADLTSSMDKATSLRNEYNASK--EDIAMLQVDINSSLSTLEEIDDQIAKLQSRRAELSN 426

Query: 250 AAEMKKKEVDKLMAKKQLVDEFLRKVVKETEISKEQKSEWGLKKQRAQEQMAKIFSKI 77
           A ++K KEV KL++ ++ V + L KVV E +++  +K EW  KK+ A ++ A+I +KI
Sbjct: 427 ALKIKNKEVAKLISTQRTVADSLPKVVHEVQLANSKKLEWEQKKKNALKREAEILAKI 484



 Score = 29.3 bits (64), Expect(2) = 1e-11
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = -3

Query: 531 LTSPIKTDSNIGANQYDILKLIDDIPLACKEL*ENEKTA*EVD 403
           L+S ++ D ++ A+Q   LKLI++IP+  K+  E  +   EV+
Sbjct: 324 LSSKLQKDPSLNADQLSKLKLIEEIPVTGKDYLETMQIIEEVN 366


>ref|NP_193220.1| uncharacterized protein [Arabidopsis thaliana]
           gi|2244841|emb|CAB10263.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268230|emb|CAB78526.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|44917449|gb|AAS49049.1| At4g14840 [Arabidopsis
           thaliana] gi|46931278|gb|AAT06443.1| At4g14840
           [Arabidopsis thaliana] gi|332658108|gb|AEE83508.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 555

 Score = 58.2 bits (139), Expect(2) = 9e-09
 Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
 Frame = -2

Query: 403 YSPLETNIAWATTLENEYDDSKGYESLLRAELDYNSQKVKKLQDQIAALN-------QAA 245
           +S LE N A   +L+ EY D K     ++ E+D NS+ ++++ +QIA L        +  
Sbjct: 432 FSALELNKAKVASLKYEYSDLKDKLGNIQTEVDRNSETIRQIDEQIAQLQAKRTELTRCI 491

Query: 244 EMKKKEVDKLMAKKQLVDEFLRKVVKETEISKEQKSEWGLKKQRAQEQMAKIFSK 80
             K KE   L+  +++V   + KVV+E + +  +K EW +KK  A ++ ++I +K
Sbjct: 492 SNKGKEKVDLIFGQKMVANSIPKVVQEVQAANLKKPEWEMKKDNALKRESEILNK 546



 Score = 28.5 bits (62), Expect(2) = 9e-09
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = -3

Query: 573 SMSCSNQTSSLKFCLTSPIKTDSNIGANQYDILKLIDDIPLACKEL*ENEKTA*EVD 403
           S+  SN+ + +   L + +K D ++ A +   LKLI++IP   +   EN+    E D
Sbjct: 374 SLFMSNEATEMA-SLAAKLKKDPSLSAEEIVRLKLIEEIPTFSEVFQENQSMIVEAD 429


>ref|NP_188891.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11994284|dbj|BAB01467.1| unnamed protein product
           [Arabidopsis thaliana] gi|17381094|gb|AAL36359.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259295|gb|AAM14383.1| unknown protein [Arabidopsis
           thaliana] gi|332643128|gb|AEE76649.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 600

 Score = 60.1 bits (144), Expect(2) = 3e-08
 Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
 Frame = -2

Query: 403 YSPLETNIAWATTLENEYDDSKGYESLLRAELDYNSQKVKKLQDQIAALN-QAAEMKK-- 233
           +S LE N A   +L+ EY D K     ++ E+D NS+ ++++ DQIA L  + +E+K+  
Sbjct: 477 FSALELNKAKVASLKYEYSDLKEKLGSIQMEVDTNSETIRQIDDQIAQLQARRSELKRYI 536

Query: 232 ----KEVDKLMAKKQLVDEFLRKVVKETEISKEQKSEWGLKKQRAQEQMAKIFSK 80
               KE   L   +++V   + KVV+E + +  +K EW  KK  A ++ A+I SK
Sbjct: 537 GTKEKERVDLSYGQKMVANSIPKVVQEVQSANLKKPEWECKKDNALKREAEILSK 591



 Score = 25.0 bits (53), Expect(2) = 3e-08
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -3

Query: 531 LTSPIKTDSNIGANQYDILKLIDDIPLACKEL*ENEKTA*EVD 403
           L + ++ D N+ A +   LKL+++IP   +   EN+    E D
Sbjct: 432 LATKLRKDPNLTAEEIVRLKLMEEIPTFSEVFQENKGVIEEAD 474


>ref|XP_002868246.1| hypothetical protein ARALYDRAFT_493410 [Arabidopsis lyrata subsp.
           lyrata] gi|297314082|gb|EFH44505.1| hypothetical protein
           ARALYDRAFT_493410 [Arabidopsis lyrata subsp. lyrata]
          Length = 554

 Score = 55.8 bits (133), Expect(2) = 9e-08
 Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
 Frame = -2

Query: 403 YSPLETNIAWATTLENEYDDSKGYESLLRAELDYNSQKVKKLQDQIAALN-------QAA 245
           +S LE N +   +L+ EY D K     ++ E+D +++ ++++ +QIA L           
Sbjct: 431 FSALELNKSKVASLKYEYSDLKDKLGNIQTEVDTSTETIRQIDEQIAQLQARRTELTHCI 490

Query: 244 EMKKKEVDKLMAKKQLVDEFLRKVVKETEISKEQKSEWGLKKQRAQEQMAKIFSK 80
             K+KE   L   +++V   + KVV+E + +  +K +W LKK  A ++ A+I +K
Sbjct: 491 SNKEKEKVDLSYGQKMVANSIPKVVQEVQAANSKKPDWELKKDNALKREAEILNK 545



 Score = 27.3 bits (59), Expect(2) = 9e-08
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = -3

Query: 573 SMSCSNQTSSLKFCLTSPIKTDSNIGANQYDILKLIDDIPLACKEL*ENEKTA*EVD 403
           S+  SN+ + +   L + ++ D ++ A +   LKLI++IP   +   EN+    E D
Sbjct: 373 SLFMSNEATEMA-SLAAKLRLDPSLSAEEIVRLKLIEEIPTFSEVFQENKSVIEEAD 428


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