BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031094
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   178   5e-43
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   177   6e-43
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   176   1e-42
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   167   8e-40
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   164   9e-39

>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/157 (56%), Positives = 113/157 (71%), Gaps = 2/157 (1%)
 Frame = -3

Query: 470 VQNHFQTVIKSIRTDHGSEFLNQSFTSFLSQFGISHQTSCTYTPQQNVRVERKHKHLLQI 291
           V+  F T IK++R+D+G+EFL      +    GI+H+TSC  TP QN RVERKH+H+L I
Sbjct: 402 VERQFDTEIKTVRSDNGTEFL--CMREYFLHKGITHETSCVGTPHQNGRVERKHRHILNI 459

Query: 290 ARALRFQSGLPHKYWGECILTVTHLINLLPSMVLHYKSPYEILHNTVPDYSSLRCFGSLC 111
           ARALRFQS LP ++WGECIL+  +LIN  PSM+L  KSPYE+L+ T P+YS LR FGSLC
Sbjct: 460 ARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPNYSHLRVFGSLC 519

Query: 110 YA--SVHSSDKFDSRAIQCVFLGYPHLHKGCKLLRLD 6
           YA    H  DKF +R+ +CVF+GYPH  KG +L  L+
Sbjct: 520 YAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLE 556


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  177 bits (450), Expect = 6e-43
 Identities = 88/157 (56%), Positives = 112/157 (71%), Gaps = 2/157 (1%)
 Frame = -3

Query: 470 VQNHFQTVIKSIRTDHGSEFLNQSFTSFLSQFGISHQTSCTYTPQQNVRVERKHKHLLQI 291
           V+  F T IK++R+D+G+EFL      +    GI+H+TSC  TP QN RVERKH+H+L I
Sbjct: 402 VERQFDTEIKTVRSDNGTEFL--CMREYFLHKGIAHETSCVGTPHQNGRVERKHRHILNI 459

Query: 290 ARALRFQSGLPHKYWGECILTVTHLINLLPSMVLHYKSPYEILHNTVPDYSSLRCFGSLC 111
           ARALRFQS LP ++WGECIL+  +LIN  PSM+L  KSPYE+L+ T P YS LR FGSLC
Sbjct: 460 ARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLC 519

Query: 110 YA--SVHSSDKFDSRAIQCVFLGYPHLHKGCKLLRLD 6
           YA    H  DKF +R+ +CVF+GYPH  KG +L  L+
Sbjct: 520 YAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLE 556


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  176 bits (447), Expect = 1e-42
 Identities = 88/157 (56%), Positives = 111/157 (70%), Gaps = 2/157 (1%)
 Frame = -3

Query: 470  VQNHFQTVIKSIRTDHGSEFLNQSFTSFLSQFGISHQTSCTYTPQQNVRVERKHKHLLQI 291
            V+  F T IK +R+D+G+EFL      +    GI+H+TSC  TP QN RVERKH+H+L I
Sbjct: 626  VERQFDTEIKIVRSDNGTEFL--CMREYFLHKGIAHETSCVGTPHQNGRVERKHRHILNI 683

Query: 290  ARALRFQSGLPHKYWGECILTVTHLINLLPSMVLHYKSPYEILHNTVPDYSSLRCFGSLC 111
            ARALRFQS LP ++WGECIL+  +LIN  PSM+L  KSPYE+L+ T P YS LR FGSLC
Sbjct: 684  ARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLC 743

Query: 110  YA--SVHSSDKFDSRAIQCVFLGYPHLHKGCKLLRLD 6
            YA    H  DKF +R+ +CVF+GYPH  KG +L  L+
Sbjct: 744  YAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLE 780


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  167 bits (423), Expect = 8e-40
 Identities = 86/156 (55%), Positives = 105/156 (67%), Gaps = 1/156 (0%)
 Frame = -3

Query: 473  YVQNHFQTVIKSIRTDHGSEFLNQSFTSFLSQFGISHQTSCTYTPQQNVRVERKHKHLLQ 294
            YV   F + IK  R+D+G EFL  S  SF    G+  Q SC YTPQQN  VERKH+H+LQ
Sbjct: 656  YVSTQFASHIKIFRSDNGGEFL--SLQSFFKDNGVLFQHSCVYTPQQNGVVERKHRHILQ 713

Query: 293  IARALRFQSGLPHKYWGECILTVTHLINLLPSMVLHYKSPYEILHNTVPDYSSLRCFGSL 114
            +ARAL+FQ+ LP ++WGEC LT  H+IN LPS VL +K+P+E L+   P YS LR FG L
Sbjct: 714  VARALKFQAQLPTQFWGECALTAVHIINRLPSPVLSFKTPFERLYLKPPTYSHLRVFGCL 773

Query: 113  CYA-SVHSSDKFDSRAIQCVFLGYPHLHKGCKLLRL 9
             YA +VH S KFD RAI C+F+GYP   K  KL  L
Sbjct: 774  AYATNVHVSHKFDHRAIACIFIGYPVGQKAYKLFNL 809


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/156 (51%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
 Frame = -3

Query: 473  YVQNHFQTVIKSIRTDHGSEFLNQSFTSFLSQFGISHQTSCTYTPQQNVRVERKHKHLLQ 294
            +V+  F T ++++R D+G+EF+      FL   GI  QTSC YTPQQN  VERKH+H+L 
Sbjct: 878  FVKTQFHTDVQTVRMDNGTEFI--PLRIFLQNKGIELQTSCIYTPQQNGVVERKHRHILN 935

Query: 293  IARALRFQSGLPHKYWGECILTVTHLINLLPSMVLHYKSPYEILHNTVPDYSSLRCFGSL 114
            +AR+L FQS +P ++WGEC+LT  +LIN +P+ +L  KSP+E+L+N  P  + LR FG  
Sbjct: 936  VARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCE 995

Query: 113  CY-ASVHSSDKFDSRAIQCVFLGYPHLHKGCKLLRL 9
            CY  +VH   KFD RA  CVFLGYPH  KG K+L L
Sbjct: 996  CYVTNVHPKQKFDPRASICVFLGYPHGKKGYKVLDL 1031