BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031089
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23741.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]   129   2e-28
ref|XP_002518208.1| pentatricopeptide repeat-containing protein,...   128   5e-28
ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>emb|CBI23741.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/126 (53%), Positives = 96/126 (76%)
 Frame = -3

Query: 378 SLYHTSADVPDPSLSLTRLLQLSIDNQSLIQTQQSHARVCYFGLTQHSVIVTKLISAYSV 199
           S Y+ SA   DPSL+L + L  S+ ++SL  T+QSH+R+   GL+Q+S++ TKLI AY++
Sbjct: 11  SRYYASAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAI 70

Query: 198 CKYPDASRLVFDSVRVKNVFLWNTLINGYAKNGLCDESFKLFIEMCRDGGDPDNYTLSTM 19
           C++P  SRLVFDS++ KNVFLWN+LINGYAKN L +E+F+LF +MC     PD++TLST+
Sbjct: 71  CQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTL 130

Query: 18  AKVCGD 1
           +KV  +
Sbjct: 131 SKVSSE 136


>ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/126 (53%), Positives = 96/126 (76%)
 Frame = -3

Query: 378 SLYHTSADVPDPSLSLTRLLQLSIDNQSLIQTQQSHARVCYFGLTQHSVIVTKLISAYSV 199
           S Y+ SA   DPSL+L + L  S+ ++SL  T+QSH+R+   GL+Q+S++ TKLI AY++
Sbjct: 11  SRYYASAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAI 70

Query: 198 CKYPDASRLVFDSVRVKNVFLWNTLINGYAKNGLCDESFKLFIEMCRDGGDPDNYTLSTM 19
           C++P  SRLVFDS++ KNVFLWN+LINGYAKN L +E+F+LF +MC     PD++TLST+
Sbjct: 71  CQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTL 130

Query: 18  AKVCGD 1
           +KV  +
Sbjct: 131 SKVSSE 136



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
 Frame = -3

Query: 363 SADVPDPSLSLTRLLQLSIDNQSLIQTQQSHARVCYFGLTQHSVIVTKLISAYSVCKYPD 184
           S+DV     +L+ L ++S +  +L   +  H +    G    +V+   ++S Y  C   +
Sbjct: 117 SSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFE 176

Query: 183 ASRLVFDSVRVKNVFLWNTLINGYAKNGLC---DESFKLFIEMCRDGGDPDNYTLSTMAK 13
            SR VFD + ++N   WN LI GYA +G C   +E+++   +M  D   PD YT+S++  
Sbjct: 177 ESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLP 236

Query: 12  VC 7
           +C
Sbjct: 237 LC 238


>emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/126 (51%), Positives = 93/126 (73%)
 Frame = -3

Query: 378 SLYHTSADVPDPSLSLTRLLQLSIDNQSLIQTQQSHARVCYFGLTQHSVIVTKLISAYSV 199
           S Y+ SA   DPSL+L + L  S+ ++SL  T+QSH+R+   GL+Q+S + TKLI AY++
Sbjct: 11  SRYYASAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAI 70

Query: 198 CKYPDASRLVFDSVRVKNVFLWNTLINGYAKNGLCDESFKLFIEMCRDGGDPDNYTLSTM 19
           C++P  SRLVFDS++ KNVFLWN+LING  KN L +E+F+LF +MC     PD++TLST+
Sbjct: 71  CQHPYHSRLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTL 130

Query: 18  AKVCGD 1
           +KV  +
Sbjct: 131 SKVSSE 136



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
 Frame = -3

Query: 363 SADVPDPSLSLTRLLQLSIDNQSLIQTQQSHARVCYFGLTQHSVIVTKLISAYSVCKYPD 184
           S+DV     +L+ L ++S +  +L   +  H +    G    +V+   ++S Y  C   D
Sbjct: 117 SSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFD 176

Query: 183 ASRLVFDSVRVKNVFLWNTLINGYAKNGLC---DESFKLFIEMCRDGGDPDNYTLSTMAK 13
            SR VFD + ++N   WN LI GYA +G C   +E+++   +M  D   PD YT+S++  
Sbjct: 177 ESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLP 236

Query: 12  VC 7
           +C
Sbjct: 237 LC 238


>ref|XP_002518208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542804|gb|EEF44341.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 506

 Score =  128 bits (321), Expect = 5e-28
 Identities = 67/131 (51%), Positives = 89/131 (67%)
 Frame = -3

Query: 393 FAHKKSLYHTSADVPDPSLSLTRLLQLSIDNQSLIQTQQSHARVCYFGLTQHSVIVTKLI 214
           FA   S Y+ SA +  P  +L  LL+LSI N  L  TQQ HA++     +Q+  I TKLI
Sbjct: 10  FAPITSRYYHSATLLSPFQNLLNLLELSITNNCLTLTQQCHAQIFSMDFSQNPFIATKLI 69

Query: 213 SAYSVCKYPDASRLVFDSVRVKNVFLWNTLINGYAKNGLCDESFKLFIEMCRDGGDPDNY 34
           SAY++C  P AS+LVF+S+ VK+V LWN+LI+GY KN    ESF LF +MC  G  PD+Y
Sbjct: 70  SAYAICGVPTASKLVFNSLEVKSVPLWNSLISGYVKNQENTESFSLFCQMCSFGVLPDDY 129

Query: 33  TLSTMAKVCGD 1
           TL+T++KVCG+
Sbjct: 130 TLATLSKVCGE 140



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = -3

Query: 219 LISAYSVCKYPDASRLVFDSVRVKNVFLWNTLINGYAKNGLCDESFKLFIEM-CRDGGDP 43
           LI  YS     +    +FD ++ +NV++W  +INGY +NG  +E+  LF EM  +DG +P
Sbjct: 279 LIDMYSRINRVEKCMQLFDQMKRRNVYVWTAMINGYVQNGALEEALTLFHEMQAKDGVEP 338

Query: 42  DNYTLSTMAKVC 7
           +  TL ++  +C
Sbjct: 339 NRVTLVSVLPIC 350


>ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|222863556|gb|EEF00687.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/110 (51%), Positives = 78/110 (70%)
 Frame = -3

Query: 336 SLTRLLQLSIDNQSLIQTQQSHARVCYFGLTQHSVIVTKLISAYSVCKYPDASRLVFDSV 157
           +L  LL+LS+ ++SL  TQQ HAR+   G TQ+  + TKLISAY++   P  SRLVFDS+
Sbjct: 29  NLLDLLRLSLTHKSLKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSL 88

Query: 156 RVKNVFLWNTLINGYAKNGLCDESFKLFIEMCRDGGDPDNYTLSTMAKVC 7
             K+V+LWN+LING+ KN   +E+F  F +MC  G   D+YTL+TM+KVC
Sbjct: 89  HFKSVYLWNSLINGFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVC 138



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = -3

Query: 219 LISAYSVCKYPDASRLVFDSVRVKNVFLWNTLINGYAKNGLCDESFKLFIEM-CRDGGDP 43
           LI  YS     D  R VFD +  +NV+ W  +ING+ +NG  +E   LF EM  RDG +P
Sbjct: 278 LIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEP 337

Query: 42  DNYTLSTMAKVC 7
           +  +L ++   C
Sbjct: 338 NKVSLVSVLPAC 349