BLASTX nr result

ID: Bupleurum21_contig00031086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031086
         (1139 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165400.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   228   2e-57
ref|XP_004152776.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   228   2e-57
ref|XP_002510399.1| transcription factor, putative [Ricinus comm...   224   2e-56
ref|XP_002302028.1| predicted protein [Populus trichocarpa] gi|2...   221   3e-55
ref|NP_565106.1| homeobox protein 33 [Arabidopsis thaliana] gi|1...   220   6e-55

>ref|XP_004165400.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Cucumis sativus]
          Length = 320

 Score =  228 bits (582), Expect = 2e-57
 Identities = 111/201 (55%), Positives = 144/201 (71%), Gaps = 3/201 (1%)
 Frame = +1

Query: 352 RYRECLKNHAATIGGNVTDGCGEFMPSGDDGTLEALKCAACNCHRNFHRKETINSYGADT 531
           RYRECLKNHAA++GGN+ DGCGEFMPSG+DGTLEALKCAAC CHRNFHRKE       + 
Sbjct: 93  RYRECLKNHAASVGGNIYDGCGEFMPSGEDGTLEALKCAACECHRNFHRKEIDGETQLNI 152

Query: 532 S-DFPRTAGTHHXXXXXXXXXXXXXXNRHRNATPLSVHSNHWASVVPPVKMAF-GGGSAD 705
           S ++ R    +H                H+ +  L++HS+  A ++ P+ +AF GGG  +
Sbjct: 153 SPNYRRGLMLNHLQLPPPLPSPSALHGHHKFSMALNLHSSPTAPIIAPMNVAFAGGGGNE 212

Query: 706 SSSEELN-FNAGGGGMTAAPYGSSKKRFRTKFTQDQKEKMMEFAEKVGWRIPREDDAQVQ 882
           SSSE+LN F++    M  + +  SKKRFRTKFTQ+QK++M+EFAEKVGWRI ++D+ +V+
Sbjct: 213 SSSEDLNVFHSNAEVMPPSSFSLSKKRFRTKFTQEQKDRMLEFAEKVGWRIQKQDEEEVE 272

Query: 883 RFCGEIGVKRQVFKVWMHNNK 945
           RFC E+GVKRQV KVWMHNNK
Sbjct: 273 RFCTEVGVKRQVLKVWMHNNK 293


>ref|XP_004152776.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Cucumis sativus]
          Length = 276

 Score =  228 bits (582), Expect = 2e-57
 Identities = 111/201 (55%), Positives = 144/201 (71%), Gaps = 3/201 (1%)
 Frame = +1

Query: 352 RYRECLKNHAATIGGNVTDGCGEFMPSGDDGTLEALKCAACNCHRNFHRKETINSYGADT 531
           RYRECLKNHAA++GGN+ DGCGEFMPSG+DGTLEALKCAAC CHRNFHRKE       + 
Sbjct: 49  RYRECLKNHAASVGGNIYDGCGEFMPSGEDGTLEALKCAACECHRNFHRKEIDGETQLNI 108

Query: 532 S-DFPRTAGTHHXXXXXXXXXXXXXXNRHRNATPLSVHSNHWASVVPPVKMAF-GGGSAD 705
           S ++ R    +H                H+ +  L++HS+  A ++ P+ +AF GGG  +
Sbjct: 109 SPNYRRGLMLNHLQLPPPLPSPSALHGHHKFSMALNLHSSPTAPIIAPMNVAFAGGGGNE 168

Query: 706 SSSEELN-FNAGGGGMTAAPYGSSKKRFRTKFTQDQKEKMMEFAEKVGWRIPREDDAQVQ 882
           SSSE+LN F++    M  + +  SKKRFRTKFTQ+QK++M+EFAEKVGWRI ++D+ +V+
Sbjct: 169 SSSEDLNVFHSNAEVMPPSSFSLSKKRFRTKFTQEQKDRMLEFAEKVGWRIQKQDEEEVE 228

Query: 883 RFCGEIGVKRQVFKVWMHNNK 945
           RFC E+GVKRQV KVWMHNNK
Sbjct: 229 RFCTEVGVKRQVLKVWMHNNK 249


>ref|XP_002510399.1| transcription factor, putative [Ricinus communis]
           gi|223551100|gb|EEF52586.1| transcription factor,
           putative [Ricinus communis]
          Length = 289

 Score =  224 bits (572), Expect = 2e-56
 Identities = 120/219 (54%), Positives = 146/219 (66%), Gaps = 3/219 (1%)
 Frame = +1

Query: 298 DRFQIMPISVGSKLKPP-TRYRECLKNHAATIGGNVTDGCGEFMPSGDDGTLEALKCAAC 474
           DRF I  IS GS  K    RYRECL+NHAA++GGNV DGCGEFMP G++G+LEALKCAAC
Sbjct: 56  DRFPI--ISKGSNSKTTHVRYRECLRNHAASVGGNVFDGCGEFMPGGEEGSLEALKCAAC 113

Query: 475 NCHRNFHRKETINSYGADTSDFPRTAGTHHXXXXXXXXXXXXXXNRHRNATPLSVHSNHW 654
            CHRNFHRKE         S   R+   H               ++ R +  L   S   
Sbjct: 114 ECHRNFHRKEVDGETQFSPSS-RRSPMVHSLQLPPPLPSPTVLHHQQRYSVGLHSTSPTT 172

Query: 655 ASVVPPVKMAFGGGSADSSSEELN-FNAGGGGMTAAP-YGSSKKRFRTKFTQDQKEKMME 828
            ++V P+ +AFGGG  +SSSE+LN F++   G+   P Y  SKKRFRTKFT DQK+KMME
Sbjct: 173 PNMVQPMTVAFGGGGTESSSEDLNAFHSNADGVPPPPPYVLSKKRFRTKFTHDQKDKMME 232

Query: 829 FAEKVGWRIPREDDAQVQRFCGEIGVKRQVFKVWMHNNK 945
           FAEKVGWRI ++D+ +V +FC EIGV+RQVFKVWMHNNK
Sbjct: 233 FAEKVGWRINKQDEEEVDKFCAEIGVRRQVFKVWMHNNK 271


>ref|XP_002302028.1| predicted protein [Populus trichocarpa] gi|222843754|gb|EEE81301.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  221 bits (563), Expect = 3e-55
 Identities = 117/222 (52%), Positives = 147/222 (66%), Gaps = 6/222 (2%)
 Frame = +1

Query: 298 DRFQIMPISVGSKLKPP-TRYRECLKNHAATIGGNVTDGCGEFMPSGDDGTLEALKCAAC 474
           DR  I  IS GS  K   TRY ECL+NHAA++GGNV DGCGEFMP G++G+LEALKCAAC
Sbjct: 58  DRLAI--ISSGSNSKTSNTRYLECLRNHAASVGGNVFDGCGEFMPGGEEGSLEALKCAAC 115

Query: 475 NCHRNFHRKETINSYGADTSDFPRTAGTHHXXXXXXXXXXXXXXNRHRNAT-PLSVHSN- 648
           +CHRNFHR+E              T   H               + H +    + +H++ 
Sbjct: 116 DCHRNFHRRELDGEIQFSPGSRRSTTMVHSLQLAPPLPSPTVLHHHHHHQRYSMGLHTSP 175

Query: 649 HWASVVPPVKMAFGG--GSADSSSEELN-FNAGGGGMTAAPYGSSKKRFRTKFTQDQKEK 819
           + A++V P+ +AFGG  G  +SSSEELN F +   G    PY  SKKR RTKFTQ+QK+K
Sbjct: 176 NTANMVQPMSVAFGGTSGGTESSSEELNPFQSNAEGAPPPPYVMSKKRHRTKFTQEQKDK 235

Query: 820 MMEFAEKVGWRIPREDDAQVQRFCGEIGVKRQVFKVWMHNNK 945
           MMEFAEKVGWRI ++D+ +V+RFC E+GV+RQVFKVWMHNNK
Sbjct: 236 MMEFAEKVGWRINKQDEEEVERFCAEVGVRRQVFKVWMHNNK 277


>ref|NP_565106.1| homeobox protein 33 [Arabidopsis thaliana]
           gi|10092273|gb|AAG12686.1|AC025814_10 hypothetical
           protein; 24548-23619 [Arabidopsis thaliana]
           gi|21536702|gb|AAM61034.1| unknown [Arabidopsis
           thaliana] gi|110737972|dbj|BAF00922.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|114050583|gb|ABI49441.1| At1g75240 [Arabidopsis
           thaliana] gi|332197571|gb|AEE35692.1| homeobox protein
           33 [Arabidopsis thaliana]
          Length = 309

 Score =  220 bits (560), Expect = 6e-55
 Identities = 116/232 (50%), Positives = 146/232 (62%), Gaps = 24/232 (10%)
 Frame = +1

Query: 322 SVGSKLKPPTRYRECLKNHAATIGGNVTDGCGEFMPSGDDGTLEALKCAACNCHRNFHRK 501
           S+ +  KP  RYRECLKNHAA++GG+V DGCGEFMPSG++GT+EAL+CAAC+CHRNFHRK
Sbjct: 65  SISAAAKPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRK 124

Query: 502 ETINSYGADTSDFPRTAGTHHXXXXXXXXXXXXXXNRHRNATPLSVHSNH---------- 651
           E      +D     R    HH              N   N   L    N+          
Sbjct: 125 EMDGVGSSDLISHHRHHHYHHNQYGGGGGRRPPPPNMMLNPLMLPPPPNYQPIHHHKYGM 184

Query: 652 ----WASVVPPVKMAF--GGGSADSSSEELNF---NAGGG-----GMTAAPYGSSKKRFR 789
                  +V P+ +A+  GGG A+SSSE+LN    ++G G     G  A    SSKKRFR
Sbjct: 185 SPPGGGGMVTPMSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAGQMAFSMSSSKKRFR 244

Query: 790 TKFTQDQKEKMMEFAEKVGWRIPREDDAQVQRFCGEIGVKRQVFKVWMHNNK 945
           TKFT DQKE+MM+FAEK+GWR+ ++D+ +++RFCGEIGVKRQVFKVWMHNNK
Sbjct: 245 TKFTTDQKERMMDFAEKLGWRMNKQDEEELKRFCGEIGVKRQVFKVWMHNNK 296


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