BLASTX nr result
ID: Bupleurum21_contig00031083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00031083
(660 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c... 324 1e-86
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera] 318 4e-85
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig... 317 1e-84
emb|CBI19874.3| unnamed protein product [Vitis vinifera] 317 1e-84
ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|2... 316 3e-84
>ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis]
gi|223551243|gb|EEF52729.1| hypothetical protein
RCOM_1598060 [Ricinus communis]
Length = 1427
Score = 324 bits (830), Expect = 1e-86
Identities = 158/224 (70%), Positives = 184/224 (82%), Gaps = 4/224 (1%)
Frame = -1
Query: 660 RNSGVVNDILKTLMNLPSVDAAEMWCCSEGPELNSSMNGEVLALLYIKGRVISSHSDGTI 481
R S V+ D+LK+LMNL SV+A ++W C+E EL SS NGEVL+LL+++GRVISSHSDGTI
Sbjct: 1104 RTSPVIADVLKSLMNLASVNAVKLWNCTEVVELESSSNGEVLSLLHLRGRVISSHSDGTI 1163
Query: 480 KVWDVSKRVPRLIQEVREHTKAVTCLYMPFSGDKLYSGSLDKTIRVWTMKQEEIHCVQVH 301
KVWD KRV RLIQEVREHTKAVTC+ +P GDKLYSGSLDKTIRVW +K EEIHCVQVH
Sbjct: 1164 KVWDAGKRVLRLIQEVREHTKAVTCICVPSFGDKLYSGSLDKTIRVWVIKPEEIHCVQVH 1223
Query: 300 DVKEAVLELVANNSIACFAPQGTGVK----VYNWSGVPKHINFTKTVKCLAMMGDKLYCG 133
DVKEAV L AN +ACF QGTGVK +YNWSG+PKH+ F K VK LAM GDKL+CG
Sbjct: 1224 DVKEAVFGLTANAKVACFTSQGTGVKASAPIYNWSGIPKHVTFNKNVKSLAMTGDKLFCG 1283
Query: 132 CTAFSIQEVDLQKHTSTIFYSGARKLLGKQIVQSLHVHDNLLFA 1
C+ +SIQEVDL+K TST FYSG RKLLGKQ + SLH++D+LLFA
Sbjct: 1284 CSGYSIQEVDLRKLTSTTFYSGTRKLLGKQNIYSLHINDDLLFA 1327
>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
Length = 1494
Score = 318 bits (816), Expect = 4e-85
Identities = 155/220 (70%), Positives = 175/220 (79%)
Frame = -1
Query: 660 RNSGVVNDILKTLMNLPSVDAAEMWCCSEGPELNSSMNGEVLALLYIKGRVISSHSDGTI 481
+NS VV+D+LK L+ LPSVD E+WCC E EL+S NG +L+LL +K V+S HSDGTI
Sbjct: 1175 KNSVVVSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSLLPLKSWVLSGHSDGTI 1234
Query: 480 KVWDVSKRVPRLIQEVREHTKAVTCLYMPFSGDKLYSGSLDKTIRVWTMKQEEIHCVQVH 301
KVWD KR RLIQEVREHTKAVTCLY S DKLYSGSLDKTIRVWT+K EEIHCVQVH
Sbjct: 1235 KVWDAGKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTIRVWTVKPEEIHCVQVH 1294
Query: 300 DVKEAVLELVANNSIACFAPQGTGVKVYNWSGVPKHINFTKTVKCLAMMGDKLYCGCTAF 121
DVKEAV +L AN + ACF+ QGTGV VY+WSGVPKHINF K VKCL M D+LYCGCT +
Sbjct: 1295 DVKEAVYQLTANANFACFSSQGTGVNVYSWSGVPKHINFNKYVKCLDMAEDRLYCGCTGY 1354
Query: 120 SIQEVDLQKHTSTIFYSGARKLLGKQIVQSLHVHDNLLFA 1
SIQEVDL K TS FYSGARKLLGKQ + SL +HD L+A
Sbjct: 1355 SIQEVDLCKSTSNTFYSGARKLLGKQTIYSLRIHDGFLYA 1394
>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1494
Score = 317 bits (812), Expect = 1e-84
Identities = 155/220 (70%), Positives = 175/220 (79%)
Frame = -1
Query: 660 RNSGVVNDILKTLMNLPSVDAAEMWCCSEGPELNSSMNGEVLALLYIKGRVISSHSDGTI 481
+NS VV+D+LK L+ LPSVD E+WCC E EL+S NG +L+LL +K V+S HSDGTI
Sbjct: 1175 KNSVVVSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSLLPLKSWVLSGHSDGTI 1234
Query: 480 KVWDVSKRVPRLIQEVREHTKAVTCLYMPFSGDKLYSGSLDKTIRVWTMKQEEIHCVQVH 301
KVWD KR RLIQEVREHTKAVTCLY S DKLYSGSLDKTIRVWT+K EEIHCVQVH
Sbjct: 1235 KVWDAGKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTIRVWTVKPEEIHCVQVH 1294
Query: 300 DVKEAVLELVANNSIACFAPQGTGVKVYNWSGVPKHINFTKTVKCLAMMGDKLYCGCTAF 121
DVKEAV +L AN S ACF+ QGTGV VY+WSGVPKHINF K VK L M D+LYCGCT +
Sbjct: 1295 DVKEAVYQLTANASFACFSSQGTGVNVYSWSGVPKHINFNKNVKSLDMAEDRLYCGCTGY 1354
Query: 120 SIQEVDLQKHTSTIFYSGARKLLGKQIVQSLHVHDNLLFA 1
SIQEVDL K T+ FYSGARKLLGKQ + SL +HD LL+A
Sbjct: 1355 SIQEVDLCKSTTNTFYSGARKLLGKQTIYSLRIHDGLLYA 1394
>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
Length = 1510
Score = 317 bits (812), Expect = 1e-84
Identities = 155/220 (70%), Positives = 175/220 (79%)
Frame = -1
Query: 660 RNSGVVNDILKTLMNLPSVDAAEMWCCSEGPELNSSMNGEVLALLYIKGRVISSHSDGTI 481
+NS VV+D+LK L+ LPSVD E+WCC E EL+S NG +L+LL +K V+S HSDGTI
Sbjct: 1191 KNSVVVSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSLLPLKSWVLSGHSDGTI 1250
Query: 480 KVWDVSKRVPRLIQEVREHTKAVTCLYMPFSGDKLYSGSLDKTIRVWTMKQEEIHCVQVH 301
KVWD KR RLIQEVREHTKAVTCLY S DKLYSGSLDKTIRVWT+K EEIHCVQVH
Sbjct: 1251 KVWDAGKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTIRVWTVKPEEIHCVQVH 1310
Query: 300 DVKEAVLELVANNSIACFAPQGTGVKVYNWSGVPKHINFTKTVKCLAMMGDKLYCGCTAF 121
DVKEAV +L AN S ACF+ QGTGV VY+WSGVPKHINF K VK L M D+LYCGCT +
Sbjct: 1311 DVKEAVYQLTANASFACFSSQGTGVNVYSWSGVPKHINFNKNVKSLDMAEDRLYCGCTGY 1370
Query: 120 SIQEVDLQKHTSTIFYSGARKLLGKQIVQSLHVHDNLLFA 1
SIQEVDL K T+ FYSGARKLLGKQ + SL +HD LL+A
Sbjct: 1371 SIQEVDLCKSTTNTFYSGARKLLGKQTIYSLRIHDGLLYA 1410
>ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|222842427|gb|EEE79974.1|
predicted protein [Populus trichocarpa]
Length = 1518
Score = 316 bits (809), Expect = 3e-84
Identities = 157/238 (65%), Positives = 184/238 (77%), Gaps = 18/238 (7%)
Frame = -1
Query: 660 RNSGVVNDILKTLMNLPSVDAAEMWCCSEGPELNSSMNGEVLALLYIKGRVISSHSDGTI 481
R+S VV D+LK+LM + SV+A E+W C+E E++S +NG++L+LL+++GRVISSHSDGTI
Sbjct: 1169 RSSPVVTDVLKSLMKMSSVNATELWNCTEVVEVDSCVNGKLLSLLHLEGRVISSHSDGTI 1228
Query: 480 KVWDVSKRVPRLIQEVREHTKAVTCLYMPFSGDKLYSGSLDKTIRVWTMKQEEIHCVQVH 301
KVWD KRV RLIQEVREHTKAVTCLY+P SGDKLYSGSLDKTIRVW +K EEI C+QVH
Sbjct: 1229 KVWDAGKRVLRLIQEVREHTKAVTCLYIPSSGDKLYSGSLDKTIRVWAIKPEEIRCIQVH 1288
Query: 300 DVKEAVLELVANNSIACFAPQGTGVK------------------VYNWSGVPKHINFTKT 175
DVKEAV EL AN+ +ACF QG GVK VY+WS VPKHINF +T
Sbjct: 1289 DVKEAVYELAANDKVACFVSQGPGVKASYTNYLTATGANLQSLAVYSWSDVPKHINFNRT 1348
Query: 174 VKCLAMMGDKLYCGCTAFSIQEVDLQKHTSTIFYSGARKLLGKQIVQSLHVHDNLLFA 1
VKCLAM GD LYCG + +SIQEVDL K TST FYSG RK+LGKQ + SLHV D LLFA
Sbjct: 1349 VKCLAMTGDILYCGASGYSIQEVDLSKFTSTTFYSGTRKMLGKQSIYSLHVQDGLLFA 1406