BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031076
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]         117   1e-24
gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...   113   2e-23
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]                   104   6e-21
gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   103   1e-20
gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana] gi|...   100   1e-19

>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
 Frame = -3

Query: 497 IGNSEVKRVLVDSGASVDILFYDAFIKMGYSDGQLTPSRSPIFGFNGIECPVEGTIKLPM 318
           I  ++V RVL+D+G+SVD++F   F+ +G    Q+ P  +P+ GF+G      G+I L M
Sbjct: 494 IHGAKVSRVLIDTGSSVDVMFLPTFLALGLKIEQIVPETTPLVGFDGSTSETLGSIPLLM 553

Query: 317 TMGKEPCESTQMMTFLVVKA-SSSYNAIIGRTGLHLFKAIPSTYHLKLKFPTRNGVGEEK 141
           + G+     T+ + F ++ A + +YN I GR  L LF+A+PS  HLK+KFP  NG+GE K
Sbjct: 554 SWGRGHLRRTKEIRFWIINALAKTYNVICGRPSLCLFEAVPSVLHLKVKFPANNGIGEVK 613

Query: 140 GDQKLARSCYIAALKPDGAGGQVLPVEDMDVRMEDERRGKPAEDL 6
           G+Q  AR C +  +     GG +      + R  D  +  PAE L
Sbjct: 614 GNQARARECRLNTMAAIEEGGDINEKNPCEPRRIDTGKFCPAERL 658


>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score =  113 bits (282), Expect = 2e-23
 Identities = 64/163 (39%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
 Frame = -3

Query: 497 IGNSEVKRVLVDSGASVDILFYDAFIKMGYSDGQLTPSRSPIFGFNGIECPVEGTIKLPM 318
           +GN E+  ++VD+G+SVD+LFYDAF + G+ D +L   ++P+ GF G      GTI+LP 
Sbjct: 71  VGNYELSCIMVDTGSSVDVLFYDAFKRTGHLDSKLQGRKTPLTGFAGDTTFSIGTIQLP- 129

Query: 317 TMGKEPCESTQMMTFLVVKASSSYNAIIGRTGLHLFKAIPSTYHLKLKFPTRNGVGEEKG 138
           T+ +      Q+  FLVV   + +NAI+GR  LH+ KA+PSTYH  +KFP+  G+    G
Sbjct: 130 TIARGV---RQLTNFLVVDKKAPFNAILGRPWLHVMKAVPSTYHQCIKFPSYKGIAVVYG 186

Query: 137 DQKLARSCYIAALKP-DGAGGQVLPVEDMDVRMEDERRGKPAE 12
            Q+ +R CY+ + +    A   VL +ED    M+  R   P++
Sbjct: 187 SQRSSRKCYMGSYEDIKKADPVVLMIEDELAEMKTVRSLDPSQ 229


>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
          Length = 1542

 Score =  104 bits (260), Expect = 6e-21
 Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
 Frame = -3

Query: 500  LIGNSEVKRVLVDSGASVDILFYDAFIKMGYSDGQLTPSRSPIFGFNGIECPVEGTIKLP 321
            ++   E++R+LVD+G+SVDILF  A   MG SD +L  + + + GF G      G  +LP
Sbjct: 557  MVAAIELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMGINELP 616

Query: 320  MTMGKEPCESTQMMTFLVVKASSSYNAIIGRTGLHLFKAIPSTYHLKLKFPTRNGVGEEK 141
            +T+G +P E   M+ F+VV+  S Y  I+GR  + + + + ST++L LK+     VG  K
Sbjct: 617  ITVGSKPFERIVMLYFVVVEERSPYQMILGRPFIRISQCVISTHYLALKYRVNGVVGVVK 676

Query: 140  GDQKLARSCYIAALKPDGAGGQVLPVEDMDVRMEDER-RGKPAEDL 6
            G QK+ RSCY  A K      + L V  +D R + ++ R +P E L
Sbjct: 677  GVQKMTRSCYATAAK------ETLQVTSLDNRGDSKKGRQEPVEKL 716


>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/132 (39%), Positives = 81/132 (61%)
 Frame = -3

Query: 497 IGNSEVKRVLVDSGASVDILFYDAFIKMGYSDGQLTPSRSPIFGFNGIECPVEGTIKLPM 318
           + N EV R+L+D+G+SVD++F     KMG S G +    SP+  F        GTIKLP+
Sbjct: 539 VANFEVSRILIDTGSSVDLIFLSTLEKMGISRGDIVGPPSPLVAFTSESAMSLGTIKLPV 598

Query: 317 TMGKEPCESTQMMTFLVVKASSSYNAIIGRTGLHLFKAIPSTYHLKLKFPTRNGVGEEKG 138
              K     ++++ F+V    ++YN I+G   ++  KA+PSTY+  +KFPT NGV   +G
Sbjct: 599 LAKKV----SKIVDFVVFDKPAAYNIILGTPWIYRMKAVPSTYYQCIKFPTSNGVETIRG 654

Query: 137 DQKLARSCYIAA 102
           DQ+ +R+CY+A+
Sbjct: 655 DQEASRTCYLAS 666


>gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana]
           gi|7267161|emb|CAB77873.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 681

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/115 (43%), Positives = 77/115 (66%)
 Frame = -3

Query: 497 IGNSEVKRVLVDSGASVDILFYDAFIKMGYSDGQLTPSRSPIFGFNGIECPVEGTIKLPM 318
           +GN E+  +++D+G+SVD+LFYDAF +MG+ D +L   ++P+ GF G      GTI+LP 
Sbjct: 545 VGNYELSHIMIDTGSSVDVLFYDAFKRMGHLDSELQGRKTPLTGFAGDTTFSLGTIQLP- 603

Query: 317 TMGKEPCESTQMMTFLVVKASSSYNAIIGRTGLHLFKAIPSTYHLKLKFPTRNGV 153
           T+ +      ++ +FLVV   + +NAI+GR  LH  KA+PSTYH  +KFP+  G+
Sbjct: 604 TIAR---GVRRLTSFLVVNKKAPFNAILGRPWLHAMKAVPSTYHQCIKFPSDKGI 655