BLASTX nr result
ID: Bupleurum21_contig00031061
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00031061
(685 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera] 72 4e-35
ref|XP_002270154.1| PREDICTED: uncharacterized protein LOC100264... 76 2e-32
emb|CAN75351.1| hypothetical protein VITISV_031045 [Vitis vinifera] 67 4e-32
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 69 4e-32
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc... 70 2e-31
>emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera]
Length = 1412
Score = 72.4 bits (176), Expect(3) = 4e-35
Identities = 29/56 (51%), Positives = 44/56 (78%)
Frame = +1
Query: 316 TRHSVTGYFTYLGRNCVSWCAKKQKTVYRSNSEAEYQALTYTTAELSWLSSLMREI 483
T S+TGY T+LG N +SWCAKKQ T+ S++EAEY+A+ +T AEL+W+S ++ ++
Sbjct: 1132 TXXSITGYCTFLGXNLISWCAKKQHTIXXSSTEAEYRAMAHTXAELTWMSFILNDL 1187
Score = 65.5 bits (158), Expect(3) = 4e-35
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +3
Query: 3 EHVQMLDCKPIATPLSTGHKFSVVGTPLSNPTEYRALVGGLQYLIFTRPDLSYSVN 170
E M+DCKP++TPL K S L +P+ +R LVG LQYL TRPDLSYSVN
Sbjct: 1021 ERANMIDCKPMSTPLEAKTKTSPNNVLLEDPSHFRGLVGALQYLTLTRPDLSYSVN 1076
Score = 57.0 bits (136), Expect(3) = 4e-35
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +2
Query: 170 YRCQYMHSRTLDHLKAVRRILRYLKGTISFGYGIYASSSLNLTAFSDSE 316
Y Q+MH+ TL HLK VRRILRY+KGTI G + ++L+L AFSD++
Sbjct: 1077 YASQFMHAPTLMHLKMVRRILRYVKGTIDIGLHFTSHTTLDLCAFSDAD 1125
>ref|XP_002270154.1| PREDICTED: uncharacterized protein LOC100264911 [Vitis vinifera]
Length = 1946
Score = 75.9 bits (185), Expect(3) = 2e-32
Identities = 32/68 (47%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +1
Query: 316 TRHSVTGYFTYLGRNCVSWCAKKQKTVYRSNSEAEYQALTYTTAELSWLSSLMREIEF-L 492
TR S+TGY T+LG N +SWCAKKQ T+ RS+++AEY+A+ +T AEL+W+S ++ ++ L
Sbjct: 831 TRRSITGYCTFLGGNLISWCAKKQHTISRSSTKAEYRAMAHTAAELTWMSFILNDLHVPL 890
Query: 493 GTLPRCFH 516
+ P ++
Sbjct: 891 ASTPTLYY 898
Score = 64.3 bits (155), Expect(3) = 2e-32
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +3
Query: 3 EHVQMLDCKPIATPLSTGHKFSVVGTPLSNPTEYRALVGGLQYLIFTRPDLSYSVN 170
E M+DCKP++TPL K S L +P+ +R LVG LQYL TRPDLSYSVN
Sbjct: 738 ERANMVDCKPMSTPLEAKTKTSPNNVLLEDPSYFRGLVGALQYLTLTRPDLSYSVN 793
Score = 45.4 bits (106), Expect(3) = 2e-32
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +2
Query: 170 YRCQYMHSRTLDHLKAVRRILRYLKGTISFGYGIYASSSLNLTAF 304
Y Q+MH+ TL HLK VRRILRY+KGTI + ++ ++T +
Sbjct: 794 YASQFMHAPTLVHLKMVRRILRYVKGTIDIDWAGCPTTRRSITGY 838
>emb|CAN75351.1| hypothetical protein VITISV_031045 [Vitis vinifera]
Length = 300
Score = 67.4 bits (163), Expect(3) = 4e-32
Identities = 28/63 (44%), Positives = 44/63 (69%)
Frame = +1
Query: 316 TRHSVTGYFTYLGRNCVSWCAKKQKTVYRSNSEAEYQALTYTTAELSWLSSLMREIEFLG 495
TR S TGY + G N +SW +KKQ TV RS++EAEY++L TA+++W+ L+R++
Sbjct: 169 TRRSTTGYAIFFGANLISWSSKKQSTVSRSSAEAEYRSLAVATADIAWIIQLLRDLHVTL 228
Query: 496 TLP 504
++P
Sbjct: 229 SMP 231
Score = 64.3 bits (155), Expect(3) = 4e-32
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +3
Query: 3 EHVQMLDCKPIATPLSTGHKFSVVGTPLSNPTEYRALVGGLQYLIFTRPDLSYSVNTV 176
+ M+D KPI+TP G S GT S+PT +R+L G LQYL T PDLS+SVN++
Sbjct: 58 QRASMIDAKPISTPFVVGQHLSAEGTLFSDPTLFRSLAGALQYLTITSPDLSFSVNSI 115
Score = 53.1 bits (126), Expect(3) = 4e-32
Identities = 22/49 (44%), Positives = 35/49 (71%)
Frame = +2
Query: 176 CQYMHSRTLDHLKAVRRILRYLKGTISFGYGIYASSSLNLTAFSDSEHD 322
CQ+MH+ T DH +A++RILRY+KGT G ++ S+ +L +SD++ D
Sbjct: 116 CQFMHAPTEDHFRALKRILRYVKGTAHHGLQLHKQSTRDLLGYSDADWD 164
>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
Length = 1239
Score = 69.3 bits (168), Expect(3) = 4e-32
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +3
Query: 12 QMLDCKPIATPLSTGHKFSVVGTPLSNPTEYRALVGGLQYLIFTRPDLSYSVNTV 176
Q+LD KP+ TP+ +V G+P SNPT YR+LVG LQYL TRPD++++VN+V
Sbjct: 964 QLLDSKPVHTPMVVSQHLTVAGSPFSNPTLYRSLVGALQYLTITRPDIAHAVNSV 1018
Score = 68.9 bits (167), Expect(3) = 4e-32
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +1
Query: 316 TRHSVTGYFTYLGRNCVSWCAKKQKTVYRSNSEAEYQALTYTTAELSWLSSLMREIE 486
TR S +GY YLG N VSW AKKQ TV RS+ E+EY+AL T AEL WL+ L+ +++
Sbjct: 1073 TRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALAMTAAELLWLTHLLHDLK 1129
Score = 46.2 bits (108), Expect(3) = 4e-32
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +2
Query: 179 QYMHSRTLDHLKAVRRILRYLKGTISFGYGIYASSSLN-LTAFSDSE 316
Q++H+ T+DH AV+RILRY+KGT+ FG S+ + L A+SD++
Sbjct: 1020 QFLHAPTIDHFLAVKRILRYVKGTLHFGLTFRPSTIPSALVAYSDAD 1066
>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 976
Score = 70.1 bits (170), Expect(3) = 2e-31
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 3 EHVQMLDCKPIATPLSTGHKFSVVGTP-LSNPTEYRALVGGLQYLIFTRPDLSYSVNTV 176
E M DCKP TP+ T KFS G+P +S+PT++R+L G LQYL FTRPD+SY+V V
Sbjct: 716 ERAGMSDCKPCLTPVDTSAKFSTEGSPSVSDPTDFRSLAGALQYLTFTRPDISYAVQQV 774
Score = 62.4 bits (150), Expect(3) = 2e-31
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1
Query: 316 TRHSVTGYFTYLGRNCVSWCAKKQKTVYRSNSEAEYQALTYTTAELSWLSSLMREI 483
TR S GY +LG N +SW +K+Q TV RS++EAEY+A+ AE SWL L+ E+
Sbjct: 828 TRKSTFGYAVFLGDNLISWSSKRQNTVSRSSAEAEYRAVANAVAETSWLRQLLHEL 883
Score = 50.1 bits (118), Expect(3) = 2e-31
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +2
Query: 176 CQYMHSRTLDHLKAVRRILRYLKGTISFGYGIYASSSLNLTAFSDS 313
C +MH HL A++RILRY++GT+ +G I SSS +L A+SD+
Sbjct: 775 CLHMHDPRESHLTALKRILRYIRGTLEYGLHIQRSSSFDLMAYSDA 820