BLASTX nr result

ID: Bupleurum21_contig00031060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031060
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526110.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
gb|AFK40399.1| unknown [Lotus japonicus]                               75   4e-12
ref|XP_002306069.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_003618722.1| hypothetical protein MTR_6g015150 [Medicago ...    69   4e-10
ref|XP_002324106.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10

>ref|XP_002526110.1| conserved hypothetical protein [Ricinus communis]
           gi|223534607|gb|EEF36304.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/62 (58%), Positives = 48/62 (77%)
 Frame = +1

Query: 148 SHSVTGKLEALKSLIPTQNGGDMNADQLFEETADYILLLRTQVSILQKLVEFYGGDKSSC 327
           S  V+ KLEALK+LIP  NG  + ADQLF+ETADYI+LLRTQV +LQ+L++FYG   +  
Sbjct: 52  SSKVSHKLEALKNLIPANNGEIVKADQLFQETADYIVLLRTQVFVLQRLIQFYGSSTTEA 111

Query: 328 NS 333
           ++
Sbjct: 112 DN 113


>gb|AFK40399.1| unknown [Lotus japonicus]
          Length = 116

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
 Frame = +1

Query: 49  RKITRRRTLQDGVKFNGRSKTTASSRAVN---DVDDSHSVTGKLEALKSLIPTQNGGDMN 219
           R   RRR  Q   +   R+ + +  R+      V+    ++ KL+ALK LIPT NG  + 
Sbjct: 15  RATNRRRRQQHHQQRRRRTNSPSIGRSFKTMVQVESKSKLSQKLQALKDLIPTHNGEMVK 74

Query: 220 ADQLFEETADYILLLRTQVSILQKLVEFYGGD 315
            DQLF+ETADYI+LLRT+V +LQKL+E+YG +
Sbjct: 75  PDQLFKETADYIVLLRTRVLVLQKLIEYYGNN 106


>ref|XP_002306069.1| predicted protein [Populus trichocarpa] gi|222849033|gb|EEE86580.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/64 (53%), Positives = 47/64 (73%)
 Frame = +1

Query: 139 VDDSHSVTGKLEALKSLIPTQNGGDMNADQLFEETADYILLLRTQVSILQKLVEFYGGDK 318
           V   + V+ K+EALK+LIP  + G++ ADQLF+ETADYI+LLRTQV +L+ L++FYG   
Sbjct: 40  VTSPNKVSDKMEALKNLIPATHNGEVKADQLFQETADYIVLLRTQVLVLKGLIDFYGSST 99

Query: 319 SSCN 330
              N
Sbjct: 100 ERDN 103


>ref|XP_003618722.1| hypothetical protein MTR_6g015150 [Medicago truncatula]
           gi|355493737|gb|AES74940.1| hypothetical protein
           MTR_6g015150 [Medicago truncatula]
           gi|388512729|gb|AFK44426.1| unknown [Medicago
           truncatula]
          Length = 97

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/50 (64%), Positives = 42/50 (84%)
 Frame = +1

Query: 166 KLEALKSLIPTQNGGDMNADQLFEETADYILLLRTQVSILQKLVEFYGGD 315
           KL+ALK+LIP+ NG ++  D+LF+ETADYI+ LRT+V ILQKLVE YG +
Sbjct: 38  KLKALKNLIPSNNGDEVKTDELFKETADYIVFLRTRVLILQKLVEIYGNN 87


>ref|XP_002324106.1| predicted protein [Populus trichocarpa] gi|222867108|gb|EEF04239.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 49/108 (45%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
 Frame = +1

Query: 7   SMGARRSADITAPARKITRRR-----TLQDGVKFNGRSKTTASSRAVNDVDDSHSVTGKL 171
           SM A+    +   AR+  RR        Q G+ +NG   ++ S            V+ KL
Sbjct: 3   SMPAKSKISLKKTARRRRRRPHAGACKAQRGI-YNGGLTSSCSK-----------VSDKL 50

Query: 172 EALKSLIPT--QNGGDMNADQLFEETADYILLLRTQVSILQKLVEFYG 309
           EALK+LIP    NG  +  DQLF+ETADYILLLRTQV +LQ LVEFYG
Sbjct: 51  EALKNLIPATCHNGEIVKPDQLFKETADYILLLRTQVVLLQGLVEFYG 98


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