BLASTX nr result

ID: Bupleurum21_contig00031058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031058
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307170.1| predicted protein [Populus trichocarpa] gi|2...   270   4e-70
ref|XP_002277134.1| PREDICTED: uncharacterized protein LOC100250...   255   1e-65
ref|XP_002310652.1| predicted protein [Populus trichocarpa] gi|2...   254   3e-65
ref|XP_002317729.1| predicted protein [Populus trichocarpa] gi|2...   245   1e-62
gb|ABK95705.1| unknown [Populus trichocarpa]                          245   1e-62

>ref|XP_002307170.1| predicted protein [Populus trichocarpa] gi|222856619|gb|EEE94166.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  270 bits (691), Expect = 4e-70
 Identities = 162/297 (54%), Positives = 197/297 (66%), Gaps = 6/297 (2%)
 Frame = -3

Query: 1180 QMFALKTLYIPLPGRHPPSPIIANGFDPQGTSSSEQTPPSRRRQSDFFDSFQSLKLTSSP 1001
            QMFALK+L IPLPGRH PS  ++NG D  G +S E+TPP R  QSD FDSFQSLK  SS 
Sbjct: 50   QMFALKSLQIPLPGRHQPSSFLSNGSDVPGYNSYERTPP-RGLQSDLFDSFQSLKPKSS- 107

Query: 1000 KRKVSPAMSSLQGYYGLKPPDHKAGPVECELAVYQNGGLDGQCGNP----SPHMNPPLSM 833
            + KVSPAMSSLQGYYGLKP D K  P   E+AVY+NG      G P    SP  +PPLS+
Sbjct: 108  RCKVSPAMSSLQGYYGLKPKDQKKIPEGFEMAVYRNGHSHHPEGGPYLKPSPASHPPLSL 167

Query: 832  HRKSKSVVDNFKLENGDLGNGRLAADTGEDDSENWISNLVRRRQKSEADFNKRAPEMLLK 653
            HRK+KS+ + F  E   L +     +  E +SE     LVRRRQKSEADF     ++L++
Sbjct: 168  HRKTKSLANGFLDEKNGLVDKLYLDEVKEGESEK----LVRRRQKSEADFTSIYTDLLIR 223

Query: 652  GDSSNGGFSKITSKGLALRLKAASRTASGIDSETGSQNSVSTSVGEFSLIDSLSGVKKSL 473
             +S+   FS IT KGLALR KA +RT + +D+  G   S  T  G+  L D    V+KS 
Sbjct: 224  EESTGPAFSTITGKGLALRPKAGNRTTTDVDA--GGLTSAQTGPGD--LADGFLVVRKSS 279

Query: 472  STPSFQDSDS-NSSIWPTN-WSLKPDLQALSTVAITRPIFDGLPKPITNRRNKTAVD 308
            S  S  D DS +SS+WPT+ W+LKPDLQALS  AITRPIFDGLPKP+T R+NKTA+D
Sbjct: 280  SATSLNDHDSISSSMWPTSKWNLKPDLQALSAAAITRPIFDGLPKPVTGRKNKTALD 336


>ref|XP_002277134.1| PREDICTED: uncharacterized protein LOC100250730 [Vitis vinifera]
            gi|297737940|emb|CBI27141.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  255 bits (652), Expect = 1e-65
 Identities = 153/303 (50%), Positives = 192/303 (63%), Gaps = 12/303 (3%)
 Frame = -3

Query: 1180 QMFALKTLYIPLPGRHPPSPIIANGFD-PQGTSSSEQTPPSRRRQSDFFDSFQSLKLTSS 1004
            QMFAL+TL IPLPGRHPPSP + N  + PQ  S    T    R   + F++FQSL++ SS
Sbjct: 103  QMFALRTLQIPLPGRHPPSPCLLNSSETPQRNSDWTPTDSVHR---NLFETFQSLRVKSS 159

Query: 1003 PKRKVSPAMSSLQGYYGLKPPDHKAGPVECELAVYQNGGL----DGQCGNPSPHMNPPLS 836
             +R VSPAMS+LQGYY LKP D +  P   E+AVY+        DG     S   NP LS
Sbjct: 160  SQRPVSPAMSTLQGYYRLKPEDQRNAPKGFEMAVYRKESAHYLEDGPFSKQSSISNPLLS 219

Query: 835  MHRKSKSVVDNFKLENGDLGNGRLAADTGEDDSENWISNLVRRRQKSEADFNKRAPEMLL 656
              RK +S+ + F  ENG+  +     +  E D   W   L+RRRQKSE DF+  +PEM L
Sbjct: 220  RVRKCRSLANGFMPENGEAADDMTILEAKEGDYR-WNEKLIRRRQKSETDFSC-SPEMPL 277

Query: 655  KGDSSNGG----FSKITSKGLALRLKAASRTASGIDSETGSQNSVSTSVGEFSLIDSLSG 488
            K D+ +GG    FS IT KGLALR KA +RTA+  D++    N +   +G+  + DS +G
Sbjct: 278  KEDNRSGGGGGGFSAITGKGLALRTKAVNRTAT--DADASLMNPIPVGLGDSIVTDSFAG 335

Query: 487  VKKSLSTPSFQDSDSN--SSIWPTN-WSLKPDLQALSTVAITRPIFDGLPKPITNRRNKT 317
            V+KS ST + QD DS    SIWPT+ W+LKPDLQALST AITRPIFDGLPKPIT R+NK 
Sbjct: 336  VRKSSSTSNLQDQDSAIFPSIWPTSMWNLKPDLQALSTAAITRPIFDGLPKPITGRKNKA 395

Query: 316  AVD 308
            A+D
Sbjct: 396  ALD 398


>ref|XP_002310652.1| predicted protein [Populus trichocarpa] gi|222853555|gb|EEE91102.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  254 bits (649), Expect = 3e-65
 Identities = 158/297 (53%), Positives = 189/297 (63%), Gaps = 6/297 (2%)
 Frame = -3

Query: 1180 QMFALKTLYIPLPGRHPPSPIIANGFDPQGTSSSEQTPPSRRRQSDFFDSFQSLKLTSSP 1001
            QMFALK+L IPLPGRHPPS  ++NGFD     S EQTPP R  QSD FDSFQ L   SS 
Sbjct: 127  QMFALKSLQIPLPGRHPPSLFLSNGFDTP--RSYEQTPP-RGLQSDVFDSFQYLNPKSS- 182

Query: 1000 KRKVSPAMSSLQGYYGLKPPDHKAGPVECELAVYQNG---GLDGQCG-NPSPHMNPPLSM 833
            + KVSPAMSSLQGYYGLKP D K      E+AV +NG    L+G     PSP  +PPL +
Sbjct: 183  QLKVSPAMSSLQGYYGLKPKDQKNTSKGFEMAVNRNGYSHHLEGGLYLKPSPASHPPLCL 242

Query: 832  HRKSKSVVDNFKLENGDLGNGRLAADTGEDDSENWISNLVRRRQKSEADFNKRAPEMLLK 653
            HRK++S V+    EN +L N     D  E +SE     LVRRRQKSE DF     ++L++
Sbjct: 243  HRKTRSWVNELLDENNELVNKLFLDDAKEIESEK----LVRRRQKSETDFTSIDSDLLIR 298

Query: 652  GDSSNGGFSKITSKGLALRLKAASRTASGIDSETGSQNSVSTSVGEFSLIDSLSGVKKSL 473
             ++S   FS IT K LALR KA +R    +++       +S   G   + D    V+KS 
Sbjct: 299  EENSGAAFSTITGKCLALRPKAGNRATKNVEAA----GLISAQSGPRDVADGFPMVRKSS 354

Query: 472  STPSFQDSDS-NSSIWPTN-WSLKPDLQALSTVAITRPIFDGLPKPITNRRNKTAVD 308
            STPS  D DS +SSIWPT+ WSLKPDLQALS   ITRPIFDGLPKP T R+NKTA+D
Sbjct: 355  STPSLNDQDSISSSIWPTSKWSLKPDLQALSASTITRPIFDGLPKPTTGRKNKTALD 411


>ref|XP_002317729.1| predicted protein [Populus trichocarpa] gi|222858402|gb|EEE95949.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  245 bits (626), Expect = 1e-62
 Identities = 144/300 (48%), Positives = 191/300 (63%), Gaps = 9/300 (3%)
 Frame = -3

Query: 1180 QMFALKTLYIPLPGRHPPSPIIANGFDPQGTSSSEQTPPSRRRQSDFFDSFQSLKLTSSP 1001
            QMFALKTL IPLPGRHPPSPI++NG    G +  + TPP  R  S+  ++ +SL L  SP
Sbjct: 44   QMFALKTLLIPLPGRHPPSPILSNGSASPGGNDVDMTPPWPRH-SNVLETLESLSL-KSP 101

Query: 1000 KRKVSPAMSSLQGYYGLKPPDHKAGPVECELAVYQNGGLD----GQCGNPSPHMNPPLSM 833
            ++KVSPAMS+LQ +YGLK    K      E+AVY+ G LD    G     +P   P  S 
Sbjct: 102  QQKVSPAMSTLQNFYGLKSSKRKDSAEGMEMAVYRRGSLDYLNEGLLHRATPVSGPSYSN 161

Query: 832  HRKSKSVVDNFKLENGDLGNGRLAADTGEDDSENWISNLVRRRQKSEADFNKRAPEMLLK 653
            HR S ++ D+F  ENG        ++  E + E      VRRRQK++AD      E LLK
Sbjct: 162  HR-SINLADDFLSENGLAAEYNPLSEAREGEGEKSNEKFVRRRQKADADPRSGTTEKLLK 220

Query: 652  GDSSNGG--FSKITSKGLALRLKAASRTASGIDSETGSQNSVSTSVGEFSLIDSLSGVKK 479
             +++ G   FS +T KGL++R K+ASRT+ G +SE G  N++   +G+  + D   GV+K
Sbjct: 221  EENNGGSRAFSPVTGKGLSMRPKSASRTSLGAESEPGWLNAMPVGLGDSIIADVSDGVRK 280

Query: 478  SLSTPSFQDSDSN--SSIWPTN-WSLKPDLQALSTVAITRPIFDGLPKPITNRRNKTAVD 308
            S STPS QD +++  SS+WPT+ WSLKPDLQALST AI+ PIFDGLPKPI+ RR+K A+D
Sbjct: 281  SSSTPSLQDQENSYSSSVWPTSKWSLKPDLQALSTAAISIPIFDGLPKPISGRRSKAALD 340


>gb|ABK95705.1| unknown [Populus trichocarpa]
          Length = 359

 Score =  245 bits (626), Expect = 1e-62
 Identities = 144/300 (48%), Positives = 191/300 (63%), Gaps = 9/300 (3%)
 Frame = -3

Query: 1180 QMFALKTLYIPLPGRHPPSPIIANGFDPQGTSSSEQTPPSRRRQSDFFDSFQSLKLTSSP 1001
            QMFALKTL IPLPGRHPPSPI++NG    G +  + TPP  R  S+  ++ +SL L  SP
Sbjct: 63   QMFALKTLLIPLPGRHPPSPILSNGSASPGGNDVDMTPPWPRH-SNVLETLESLSL-KSP 120

Query: 1000 KRKVSPAMSSLQGYYGLKPPDHKAGPVECELAVYQNGGLD----GQCGNPSPHMNPPLSM 833
            ++KVSPAMS+LQ +YGLK    K      E+AVY+ G LD    G     +P   P  S 
Sbjct: 121  QQKVSPAMSTLQNFYGLKSSKRKDSAEGMEMAVYRRGSLDYLNEGLLHRATPVSGPSYSN 180

Query: 832  HRKSKSVVDNFKLENGDLGNGRLAADTGEDDSENWISNLVRRRQKSEADFNKRAPEMLLK 653
            HR S ++ D+F  ENG        ++  E + E      VRRRQK++AD      E LLK
Sbjct: 181  HR-SINLADDFLSENGLAAEYNPLSEAREGEGEKSNEKFVRRRQKADADPRSGTTEKLLK 239

Query: 652  GDSSNGG--FSKITSKGLALRLKAASRTASGIDSETGSQNSVSTSVGEFSLIDSLSGVKK 479
             +++ G   FS +T KGL++R K+ASRT+ G +SE G  N++   +G+  + D   GV+K
Sbjct: 240  EENNGGSRAFSPVTGKGLSMRPKSASRTSLGAESEPGWLNAMPVGLGDSIIADVSDGVRK 299

Query: 478  SLSTPSFQDSDSN--SSIWPTN-WSLKPDLQALSTVAITRPIFDGLPKPITNRRNKTAVD 308
            S STPS QD +++  SS+WPT+ WSLKPDLQALST AI+ PIFDGLPKPI+ RR+K A+D
Sbjct: 300  SSSTPSLQDQENSYSSSVWPTSKWSLKPDLQALSTAAISIPIFDGLPKPISGRRSKAALD 359


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