BLASTX nr result

ID: Bupleurum21_contig00031040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031040
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551557.1| PREDICTED: uncharacterized protein LOC100791...   101   6e-20
ref|XP_003530285.1| PREDICTED: uncharacterized protein LOC100777...   100   1e-19
ref|XP_002264526.1| PREDICTED: uncharacterized protein LOC100247...    97   1e-18
ref|XP_002528092.1| ubiquitin-protein ligase, putative [Ricinus ...    96   4e-18
ref|XP_002299808.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17

>ref|XP_003551557.1| PREDICTED: uncharacterized protein LOC100791057 [Glycine max]
          Length = 441

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   KALIYNTSQAYYSCYLAHDGECSFRTTFSDGNTVVLTTPSTEQSINYDDWYVELSYGPRW 182
           +A ++NT+ AYY C L + G CS    F DG+  VL TP  +Q    ++WYV+LSYGPRW
Sbjct: 235 RASLHNTTNAYYKCALTN-GPCSLNLIFHDGSAAVLVTPGPQQENASNEWYVKLSYGPRW 293

Query: 183 ITYTVGLGGLAVLIFLGCYLMS--CCQHTDNRTVAQYRGIGSDRAPLLSDKDDQSNS 347
           +TY  G+GGL +L+F     ++   C H D R   +  G    RAPLLS+KDD  +S
Sbjct: 294 MTYIFGIGGLTLLVFGAFNFLNQLQCAHED-RAGVRSEGTSPQRAPLLSNKDDDLSS 349


>ref|XP_003530285.1| PREDICTED: uncharacterized protein LOC100777141 [Glycine max]
          Length = 440

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   KALIYNTSQAYYSCYLAHDGECSFRTTFSDGNTVVLTTPSTEQSINYDDWYVELSYGPRW 182
           +A ++NT+ A+Y C LA+ G CS    FSDG+  VL TP  +Q    ++WYV+LSYGPRW
Sbjct: 234 RASLHNTTNAFYKCDLAN-GPCSLNLLFSDGSAAVLVTPGPQQENASNEWYVKLSYGPRW 292

Query: 183 ITYTVGLGGLAVLIFLGCYLMS--CCQHTDNRTVAQYRGIGSDRAPLLSDKDDQSNS 347
           +TY  G+GGL +L+F     ++   C H D R   +  G    RAPLL  KDD  +S
Sbjct: 293 VTYIFGIGGLTLLVFGAFNFLNKLQCAHED-RAGVRSEGTERQRAPLLPHKDDDLSS 348


>ref|XP_002264526.1| PREDICTED: uncharacterized protein LOC100247198 [Vitis vinifera]
           gi|296083155|emb|CBI22791.3| unnamed protein product
           [Vitis vinifera]
          Length = 479

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   KALIYNTSQAYYSCYLAHDGECSFRTTFSDGNTVVLTTPSTEQSINYDDWYVELSYGPRW 182
           KAL YNT+ AY  C L   G+CS +  F   N  V+T+P  EQ I  D+WYV+LSYGPRW
Sbjct: 272 KALQYNTTGAYSKCNLTQ-GQCSLKLFFPKANAAVITSPGPEQGIPSDEWYVKLSYGPRW 330

Query: 183 ITYTVGLGGLAVLIFLGCYLMSCCQ-HTDNRTVAQYRGIGSDRAPLLSDKDDQSNS 347
           +TY VG+GG+ VL+ L    ++  Q +   R      G   + +PLL DKDD  +S
Sbjct: 331 MTYIVGVGGMTVLMLLVFNFLNKFQFNRQLRIGVPLGGTQPETSPLLPDKDDDLSS 386


>ref|XP_002528092.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532481|gb|EEF34271.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 460

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
 Frame = +3

Query: 6   ALIYNTSQAYYSCYLAHDGECSFRTTFSDGNTVVLTTPSTEQSINYDDWYVELSYGPRWI 185
           A +YNT++AYY C   + G C  RT F +GN V+L++P  E+     +WY+++SYGPRW 
Sbjct: 254 AFLYNTTEAYYKCTFTN-GMCRLRTLFPNGNAVILSSPGPEEESPSSEWYIKMSYGPRWA 312

Query: 186 TYTVGLGGLAVLIFLGCYLMS---CCQHTDNRTVAQYRGIGSDRAPLLSDKDDQSNS 347
           TY VG+  + VL+ +    ++   C +  +  T  QY  +  +RAPLLS KDD  +S
Sbjct: 313 TYVVGIAVMTVLMLVVFNFLNKFRCMR--EEGTGVQYGEVEPERAPLLSSKDDDLSS 367


>ref|XP_002299808.1| predicted protein [Populus trichocarpa] gi|222847066|gb|EEE84613.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/115 (45%), Positives = 69/115 (60%)
 Frame = +3

Query: 3   KALIYNTSQAYYSCYLAHDGECSFRTTFSDGNTVVLTTPSTEQSINYDDWYVELSYGPRW 182
           K+LIY+ SQAYYSC L++   CS +       T VLT+P   +  + +DWYV+LSYGPRW
Sbjct: 193 KSLIYDISQAYYSCPLSNH-LCSLQLFLMGTTTAVLTSPGPAEGASDEDWYVKLSYGPRW 251

Query: 183 ITYTVGLGGLAVLIFLGCYLMSCCQHTDNRTVAQYRGIGSDRAPLLSDKDDQSNS 347
           I Y +G G + VL+ L   L +  +    R   Q   I S+R PLLS KDD S+S
Sbjct: 252 IIYIIGSGVMTVLLLLALRLCNMFR-PPGRDGYQAGEIESERTPLLSQKDDDSSS 305


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