BLASTX nr result

ID: Bupleurum21_contig00031016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031016
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32233.3| unnamed protein product [Vitis vinifera]               74   2e-11
emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]    73   3e-11
emb|CAN77802.1| hypothetical protein VITISV_004741 [Vitis vinifera]    72   4e-11
ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin...    71   1e-10
ref|XP_003626655.1| PIF-like protein [Medicago truncatula] gi|35...    70   2e-10

>emb|CBI32233.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/134 (26%), Positives = 64/134 (47%)
 Frame = +3

Query: 12  RVSWRNEFITKTFLEACINEITHNGRLGTSLKPHSWVKVGEVLKKTHNFDVDARQMRNRY 191
           R +W +    K F++ C+ E     R G  LK  +W ++ E L+K       ++Q++N +
Sbjct: 9   RANWTDPIQRKHFIDLCLQEANKGFRSGGGLKFSAWPRIAEKLEKLLRKRYTSKQLKNGW 68

Query: 192 DYLKSRYTAWCQLKAKTGNHYDPXXXXXXXXXXXWKQHSQGNKFVETLKTTPLSFPELCT 371
           DY+K +Y  W ++   TG+ Y+            W+++ Q     +  +  PL+  E   
Sbjct: 69  DYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPETKQFRFKPLANVEELE 128

Query: 372 SLYDGAAATGVSGW 413
           +L++G  ATG   W
Sbjct: 129 ALFEGVLATGSKNW 142


>emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]
          Length = 596

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/134 (26%), Positives = 62/134 (46%)
 Frame = +3

Query: 12  RVSWRNEFITKTFLEACINEITHNGRLGTSLKPHSWVKVGEVLKKTHNFDVDARQMRNRY 191
           R +W      K F++ C+ E     R G  LK  +W ++ E L+K       ++Q++N +
Sbjct: 9   RANWTXPIQRKHFIDLCLQEANKGFRSGGGLKSSAWPRIAEELEKLLGKRYTSKQLKNGW 68

Query: 192 DYLKSRYTAWCQLKAKTGNHYDPXXXXXXXXXXXWKQHSQGNKFVETLKTTPLSFPELCT 371
           DY+K +Y  W ++   TG+ Y+            W+++ Q     +  +  PL+  E   
Sbjct: 69  DYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPEAKQFRFKPLANVEELE 128

Query: 372 SLYDGAAATGVSGW 413
           +L+ G  ATG   W
Sbjct: 129 ALFGGVLATGSKNW 142


>emb|CAN77802.1| hypothetical protein VITISV_004741 [Vitis vinifera]
          Length = 473

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/134 (26%), Positives = 64/134 (47%)
 Frame = +3

Query: 12  RVSWRNEFITKTFLEACINEITHNGRLGTSLKPHSWVKVGEVLKKTHNFDVDARQMRNRY 191
           R +W +    K F++ C+ E     R G  LK  +W ++ E L+K       ++Q++N +
Sbjct: 45  RANWTDPIQRKHFIDLCLQEANKGFRSGGGLKXSAWPRIAEXLEKLLXKRYTSKQLKNGW 104

Query: 192 DYLKSRYTAWCQLKAKTGNHYDPXXXXXXXXXXXWKQHSQGNKFVETLKTTPLSFPELCT 371
           DY+K +Y  W ++    G+ Y+            W+++ Q     +  +  PL+  E   
Sbjct: 105 DYMKRQYLIWSKMMTMXGHGYNSVTKTFDWXAEKWEEYLQKYPETKQFRFKPLANVEELE 164

Query: 372 SLYDGAAATGVSGW 413
           +L++G  ATG   W
Sbjct: 165 ALFEGVLATGSKNW 178


>ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed
           protein product [Vitis vinifera]
          Length = 299

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/134 (24%), Positives = 62/134 (46%)
 Frame = +3

Query: 12  RVSWRNEFITKTFLEACINEITHNGRLGTSLKPHSWVKVGEVLKKTHNFDVDARQMRNRY 191
           + +W +    K F++ C+ E     R    LK  +W ++ E L+K       ++Q++N +
Sbjct: 37  KANWTDPIQRKHFIDLCLQEANKGFRSSGGLKSSAWPRIAEELEKLLGKRFTSKQLKNEW 96

Query: 192 DYLKSRYTAWCQLKAKTGNHYDPXXXXXXXXXXXWKQHSQGNKFVETLKTTPLSFPELCT 371
           DY+K +Y  W ++   TG+ Y+            W+++ Q     +  +  PL+  E   
Sbjct: 97  DYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPEAKQFRFKPLANMEELE 156

Query: 372 SLYDGAAATGVSGW 413
           +L+ G  ATG   W
Sbjct: 157 ALFGGVLATGSKNW 170


>ref|XP_003626655.1| PIF-like protein [Medicago truncatula] gi|355520677|gb|AET01131.1|
           PIF-like protein [Medicago truncatula]
          Length = 330

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
 Frame = +3

Query: 3   KKGRVSWRNEFITKTFLEACINEITHNGRLGTSLKPHSWVKVGEVLKKTHNFDVDARQMR 182
           ++ + SW +  + + F++ C++++    R+GTS     W  +     ++   D D  Q++
Sbjct: 19  QRSKASWTDLKVNEIFIQTCLDQVIKGERIGTSFTKKGWKNIVCQFHESTGRDYDKNQLK 78

Query: 183 NRYDYLKSRYTAWCQLKAK-TGNHYDPXXXXXXXXXXXWKQHSQGNKFVETLKTTPLSFP 359
           NRYD LK  +  W  L  K TG  ++            W+     N      +   L F 
Sbjct: 79  NRYDTLKMEWRVWFDLFGKVTGMGWNNERNTFDAPDEWWENKQLENPLYGKFREKGLPFA 138

Query: 360 ELCTSLYDGAAATGVSGWGPSS 425
              T+L+ G  A G   W PSS
Sbjct: 139 HELTTLFKGVVANGEHAWAPSS 160


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