BLASTX nr result

ID: Bupleurum21_contig00031000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031000
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinif...   244   7e-63
emb|CBI25610.3| unnamed protein product [Vitis vinifera]              244   7e-63
gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]             243   1e-62
ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycin...   243   1e-62
ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis...   242   2e-62

>ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
          Length = 1622

 Score =  244 bits (622), Expect = 7e-63
 Identities = 122/162 (75%), Positives = 142/162 (87%)
 Frame = -2

Query: 486 DDPICDKYLTQAAIMLVSYCMEEDTQAKLNSLEVLEEPFFSQKLLKLIYILSNFRLQPNM 307
           DD +CDKYL Q+A +L S C+++   + ++ ++VL+EPFFS+KLL+LI ILS FR QPNM
Sbjct: 350 DDRLCDKYLDQSANVLASECIQDGIGSDISYVDVLKEPFFSRKLLRLIGILSTFRRQPNM 409

Query: 306 KCIIFVNRIVTARSLSSILQNLKVLSAWKCDFLVGVHSGVKCVSRKSTNAMLEKFRSGEL 127
           KCIIFVNRIVTARSL+ ILQNLK LS WKCDFLVGVHSG+K +SRK+ N +L+KFRS EL
Sbjct: 410 KCIIFVNRIVTARSLAYILQNLKFLSYWKCDFLVGVHSGLKSMSRKTMNIILDKFRSNEL 469

Query: 126 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 1
           NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM
Sbjct: 470 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 511


>emb|CBI25610.3| unnamed protein product [Vitis vinifera]
          Length = 1623

 Score =  244 bits (622), Expect = 7e-63
 Identities = 122/162 (75%), Positives = 142/162 (87%)
 Frame = -2

Query: 486 DDPICDKYLTQAAIMLVSYCMEEDTQAKLNSLEVLEEPFFSQKLLKLIYILSNFRLQPNM 307
           DD +CDKYL Q+A +L S C+++   + ++ ++VL+EPFFS+KLL+LI ILS FR QPNM
Sbjct: 350 DDRLCDKYLDQSANVLASECIQDGIGSDISYVDVLKEPFFSRKLLRLIGILSTFRRQPNM 409

Query: 306 KCIIFVNRIVTARSLSSILQNLKVLSAWKCDFLVGVHSGVKCVSRKSTNAMLEKFRSGEL 127
           KCIIFVNRIVTARSL+ ILQNLK LS WKCDFLVGVHSG+K +SRK+ N +L+KFRS EL
Sbjct: 410 KCIIFVNRIVTARSLAYILQNLKFLSYWKCDFLVGVHSGLKSMSRKTMNIILDKFRSNEL 469

Query: 126 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 1
           NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM
Sbjct: 470 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 511


>gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
          Length = 1622

 Score =  243 bits (620), Expect = 1e-62
 Identities = 121/162 (74%), Positives = 141/162 (87%)
 Frame = -2

Query: 486 DDPICDKYLTQAAIMLVSYCMEEDTQAKLNSLEVLEEPFFSQKLLKLIYILSNFRLQPNM 307
           DD +CD+YL+Q A +  S C ++     L  +EVL+EP+FS+KLL+LI ILSNF +QP+M
Sbjct: 347 DDSLCDRYLSQVATVFTSGCAKDGMNPDLTRVEVLKEPYFSKKLLRLIGILSNFGVQPDM 406

Query: 306 KCIIFVNRIVTARSLSSILQNLKVLSAWKCDFLVGVHSGVKCVSRKSTNAMLEKFRSGEL 127
           KCIIFVNRIVTARSLS +LQ+LKVLS+WKC FLVGVHSG+K +SRK+TN +L KFRSGEL
Sbjct: 407 KCIIFVNRIVTARSLSYMLQHLKVLSSWKCGFLVGVHSGLKSMSRKNTNIILNKFRSGEL 466

Query: 126 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 1
           NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM
Sbjct: 467 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 508


>ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycine max]
          Length = 1636

 Score =  243 bits (620), Expect = 1e-62
 Identities = 123/162 (75%), Positives = 139/162 (85%)
 Frame = -2

Query: 486 DDPICDKYLTQAAIMLVSYCMEEDTQAKLNSLEVLEEPFFSQKLLKLIYILSNFRLQPNM 307
           DD +CDKYL QAA +  S CM  D    L+S+E+L+EPFFS KLL+LI ILSNFRLQ NM
Sbjct: 352 DDSLCDKYLAQAAELFTSQCMIGDRVTDLSSVEILKEPFFSAKLLRLIGILSNFRLQKNM 411

Query: 306 KCIIFVNRIVTARSLSSILQNLKVLSAWKCDFLVGVHSGVKCVSRKSTNAMLEKFRSGEL 127
           KCIIFVNRIVTARSLS ILQ LK+L  W+ DFLVGVH+G+K +SRK+ N +++KFRSGEL
Sbjct: 412 KCIIFVNRIVTARSLSYILQKLKLLRQWRSDFLVGVHAGLKSMSRKTMNIIVDKFRSGEL 471

Query: 126 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 1
           NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM
Sbjct: 472 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 513


>ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
           gi|223537239|gb|EEF38871.1| Ribonuclease III, putative
           [Ricinus communis]
          Length = 1633

 Score =  242 bits (618), Expect = 2e-62
 Identities = 121/163 (74%), Positives = 141/163 (86%)
 Frame = -2

Query: 489 IDDPICDKYLTQAAIMLVSYCMEEDTQAKLNSLEVLEEPFFSQKLLKLIYILSNFRLQPN 310
           ID  +CDKYL QAA M  S C ++     L+S+EVL EPFFS+KLL+LI ILS FRLQPN
Sbjct: 353 IDASVCDKYLAQAANMFASVCTKDCIAFDLSSVEVLTEPFFSRKLLRLIGILSTFRLQPN 412

Query: 309 MKCIIFVNRIVTARSLSSILQNLKVLSAWKCDFLVGVHSGVKCVSRKSTNAMLEKFRSGE 130
           MK I+FVNRIVTARSLS +LQNLK L +WKCDFLVGVHSG+K +SRK+ N++LEKF++G+
Sbjct: 413 MKGIVFVNRIVTARSLSYVLQNLKFLISWKCDFLVGVHSGLKSMSRKTMNSILEKFKTGK 472

Query: 129 LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 1
           LNLL+ATKVGEEGLDIQTCCLV+RFDLPETVASFIQSRGRARM
Sbjct: 473 LNLLIATKVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARM 515


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