BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030998
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   175   5e-42
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   169   4e-40
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   167   1e-39
ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   165   5e-39

>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  175 bits (443), Expect = 5e-42
 Identities = 81/135 (60%), Positives = 105/135 (77%)
 Frame = +3

Query: 3   KSWIELQGEVYIFMAGDKTHGKSKEIYAKLVELREEIFKLGYVPVLDESLPEVDKVLKRE 182
           KSWIE++GE ++F+AGD+ H +++E+ AKL EL  EI KLGYVPV  E+L +V +  ++E
Sbjct: 449 KSWIEVRGEAHVFLAGDRNHERAEEMNAKLKELVGEIEKLGYVPVCSETLHKVGEKERKE 508

Query: 183 ELWYHSEKLALAFALVSRAAPPGKALRIIKNLRICRDCHKVFKYISMIVNMEIIVRDCNR 362
            L YHSEKLALA+ +++  APPGKALRIIKNLRICRDCH  FKY S ++  EIIVRD NR
Sbjct: 509 ALLYHSEKLALAYGILTGVAPPGKALRIIKNLRICRDCHLFFKYASRVLKKEIIVRDINR 568

Query: 363 YHKFLNGNCSCGDFW 407
           YH+F  G+C+C D W
Sbjct: 569 YHRFSYGSCTCADIW 583


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  169 bits (428), Expect = 3e-40
 Identities = 77/135 (57%), Positives = 99/135 (73%)
 Frame = +3

Query: 3   KSWIELQGEVYIFMAGDKTHGKSKEIYAKLVELREEIFKLGYVPVLDESLPEVDKVLKRE 182
           +SWIE+QGEV++F+AGD  H +SKEIY KL EL  +I KLGY               ++E
Sbjct: 440 RSWIEVQGEVHVFVAGDWKHERSKEIYQKLAELMGDIEKLGYEK-------------RKE 486

Query: 183 ELWYHSEKLALAFALVSRAAPPGKALRIIKNLRICRDCHKVFKYISMIVNMEIIVRDCNR 362
            LWYHSEKLA+AF ++   APPGK LRI+KNLRIC+DCH+ FKY++ ++  EIIVRD NR
Sbjct: 487 ALWYHSEKLAVAFGVLCGPAPPGKPLRIVKNLRICKDCHEAFKYMTRVIEREIIVRDVNR 546

Query: 363 YHKFLNGNCSCGDFW 407
           YH+F+NGNC+C D W
Sbjct: 547 YHRFVNGNCTCSDIW 561


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  169 bits (427), Expect = 4e-40
 Identities = 77/135 (57%), Positives = 100/135 (74%)
 Frame = +3

Query: 3   KSWIELQGEVYIFMAGDKTHGKSKEIYAKLVELREEIFKLGYVPVLDESLPEVDKVLKRE 182
           +SWIE+QGEV++F+AGD  H +SKEIY KL EL  +I KLGY               ++E
Sbjct: 440 RSWIEVQGEVHVFVAGDWKHERSKEIYQKLAELMGDIEKLGYEK-------------RKE 486

Query: 183 ELWYHSEKLALAFALVSRAAPPGKALRIIKNLRICRDCHKVFKYISMIVNMEIIVRDCNR 362
            LWYHSEKLA+AF ++  +APPGK LRI+KNLRIC+DCH+ FKY++ ++  EIIVRD NR
Sbjct: 487 SLWYHSEKLAVAFGVLCGSAPPGKPLRIVKNLRICKDCHEAFKYMTRVLEREIIVRDVNR 546

Query: 363 YHKFLNGNCSCGDFW 407
           YH+F+NGNC+C D W
Sbjct: 547 YHRFVNGNCTCRDIW 561


>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  167 bits (422), Expect = 1e-39
 Identities = 73/134 (54%), Positives = 102/134 (76%)
 Frame = +3

Query: 6    SWIELQGEVYIFMAGDKTHGKSKEIYAKLVELREEIFKLGYVPVLDESLPEVDKVLKREE 185
            SWIEL+ +VY F+ GD++H +SKEIY KL +LRE +   GYVP+++  L +V+++ K + 
Sbjct: 732  SWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQL 791

Query: 186  LWYHSEKLALAFALVSRAAPPGKALRIIKNLRICRDCHKVFKYISMIVNMEIIVRDCNRY 365
            LW+HSEKLA+AF L+  A PPG  +R+ KNLR+C DCH  FK+IS + + EIIVRD NR+
Sbjct: 792  LWHHSEKLAVAFGLI--ATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRF 849

Query: 366  HKFLNGNCSCGDFW 407
            H F +G+CSCGD+W
Sbjct: 850  HHFRDGSCSCGDYW 863


>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  165 bits (417), Expect = 5e-39
 Identities = 79/126 (62%), Positives = 100/126 (79%)
 Frame = +3

Query: 3   KSWIELQGEVYIFMAGDKTHGKSKEIYAKLVELREEIFKLGYVPVLDESLPEVDKVLKRE 182
           +SWIE++G+V++F+AGD+ H +S EIYAKLVEL E+I +LGY            + +K+E
Sbjct: 453 RSWIEVRGKVHVFLAGDRRHERSHEIYAKLVELMEKIEELGY-----------KEGVKKE 501

Query: 183 ELWYHSEKLALAFALVSRAAPPGKALRIIKNLRICRDCHKVFKYISMIVNMEIIVRDCNR 362
            LWYHSEKLA+AF +VS AAPPGKALRI+KNLRIC+DCH+ FKYIS +V  EIIVRD NR
Sbjct: 502 TLWYHSEKLAVAFGVVSDAAPPGKALRIVKNLRICKDCHEAFKYISCVVEREIIVRDVNR 561

Query: 363 YHKFLN 380
           YH+FLN
Sbjct: 562 YHRFLN 567