BLASTX nr result

ID: Bupleurum21_contig00030989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030989
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613795.1| LCR-like protein [Medicago truncatula] gi|35...   190   2e-46
gb|AAA21135.1| RNase NE [Nicotiana alata]                             190   2e-46
dbj|BAC77613.1| ribonuclease NW [Nicotiana glutinosa]                 189   4e-46
pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa...   188   5e-46
dbj|BAA95448.1| RNase [Nicotiana tabacum]                             187   8e-46

>ref|XP_003613795.1| LCR-like protein [Medicago truncatula] gi|355515130|gb|AES96753.1|
           LCR-like protein [Medicago truncatula]
          Length = 227

 Score =  190 bits (482), Expect = 2e-46
 Identities = 81/153 (52%), Positives = 113/153 (73%)
 Frame = -2

Query: 574 SNCTPSIAYNQS*MNDLISQMQKSWPSLSCPSNNGFSLWSSEWKQHGTCSESVLDQHSYF 395
           SNC P   +++S ++DL+  M+K+WPSLSCPS+NGF  WS EW++HGTC+ES LDQH YF
Sbjct: 75  SNCDPDSTFDKSQISDLMKNMEKNWPSLSCPSSNGFRFWSHEWEKHGTCAESELDQHEYF 134

Query: 394 KSALNLKNRVNLLMTLHNAGIKPDGKHYSTDSVMEAVSTKTGYYPGVQCNTDKFGKIQLH 215
           ++AL LK + NLL +L NAGI+P+ + YS +++ EA+   TG+ PG++CN D     QL+
Sbjct: 135 ETALKLKEKANLLQSLTNAGIEPNDEFYSIENISEAIKEGTGFTPGIECNRDSARNSQLY 194

Query: 214 EIYICVDTPASRFIECPGLPKSRCTSNIKFATF 116
           ++Y+CVDT  S FIECP LP+SRC   I+F  F
Sbjct: 195 QVYMCVDTSGSNFIECPLLPRSRCGEQIQFPKF 227


>gb|AAA21135.1| RNase NE [Nicotiana alata]
          Length = 231

 Score =  190 bits (482), Expect = 2e-46
 Identities = 82/153 (53%), Positives = 111/153 (72%)
 Frame = -2

Query: 574 SNCTPSIAYNQS*MNDLISQMQKSWPSLSCPSNNGFSLWSSEWKQHGTCSESVLDQHSYF 395
           SNC  +  Y+QS ++DLIS+MQ++WP+L+CPS  G + WS EW++HGTCSES+ DQH YF
Sbjct: 79  SNCDSNSPYDQSQVSDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCSESIFDQHGYF 138

Query: 394 KSALNLKNRVNLLMTLHNAGIKPDGKHYSTDSVMEAVSTKTGYYPGVQCNTDKFGKIQLH 215
           K AL+LKN++NLL  L  AGI PDG  YS +S+  A+ +  GY PG++CN D  G  QL+
Sbjct: 139 KKALDLKNQINLLEILQGAGINPDGGFYSLNSIKNAIRSAIGYTPGIECNVDDSGNSQLY 198

Query: 214 EIYICVDTPASRFIECPGLPKSRCTSNIKFATF 116
           ++YICVD   S  IECP  P+ +C S+I+F TF
Sbjct: 199 QVYICVDGSGSNLIECPVFPRGKCGSSIEFPTF 231


>dbj|BAC77613.1| ribonuclease NW [Nicotiana glutinosa]
          Length = 229

 Score =  189 bits (479), Expect = 4e-46
 Identities = 82/153 (53%), Positives = 112/153 (73%)
 Frame = -2

Query: 574 SNCTPSIAYNQS*MNDLISQMQKSWPSLSCPSNNGFSLWSSEWKQHGTCSESVLDQHSYF 395
           SNC  +  Y+QS ++DLIS+MQ++WP+L+CPS  G + WS EW++HGTC+E+V DQH YF
Sbjct: 77  SNCDSNSPYDQSQVSDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYF 136

Query: 394 KSALNLKNRVNLLMTLHNAGIKPDGKHYSTDSVMEAVSTKTGYYPGVQCNTDKFGKIQLH 215
           K AL+LKN++NLL  L  AGI PDG  YS +S+  A+ +  GY PG++CN D+ G  QL+
Sbjct: 137 KKALDLKNQINLLEILQGAGINPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLY 196

Query: 214 EIYICVDTPASRFIECPGLPKSRCTSNIKFATF 116
           +IYICVD   S  IECP  P+ +C S+I+F TF
Sbjct: 197 QIYICVDGSGSNLIECPIFPRGKCGSSIEFPTF 229


>pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa Ribonuclease
           Nw gi|34810727|pdb|1IYB|B Chain B, Crystal Structure Of
           The Nicotiana Glutinosa Ribonuclease Nw
          Length = 208

 Score =  188 bits (478), Expect = 5e-46
 Identities = 82/153 (53%), Positives = 112/153 (73%)
 Frame = -2

Query: 574 SNCTPSIAYNQS*MNDLISQMQKSWPSLSCPSNNGFSLWSSEWKQHGTCSESVLDQHSYF 395
           SNC  +  Y+QS ++DLIS+MQ++WP+L+CPS  G + WS EW++HGTC+E+V DQH YF
Sbjct: 56  SNCDSNSPYDQSQVSDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYF 115

Query: 394 KSALNLKNRVNLLMTLHNAGIKPDGKHYSTDSVMEAVSTKTGYYPGVQCNTDKFGKIQLH 215
           K AL+LKN++NLL  L  AGI PDG  YS +S+  A+ +  GY PG++CN D+ G  QL+
Sbjct: 116 KKALDLKNQINLLEILQGAGIHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLY 175

Query: 214 EIYICVDTPASRFIECPGLPKSRCTSNIKFATF 116
           +IYICVD   S  IECP  P+ +C S+I+F TF
Sbjct: 176 QIYICVDGSGSNLIECPIFPRGKCGSSIEFPTF 208


>dbj|BAA95448.1| RNase [Nicotiana tabacum]
          Length = 229

 Score =  187 bits (476), Expect = 8e-46
 Identities = 80/153 (52%), Positives = 113/153 (73%)
 Frame = -2

Query: 574 SNCTPSIAYNQS*MNDLISQMQKSWPSLSCPSNNGFSLWSSEWKQHGTCSESVLDQHSYF 395
           SNC  +  Y+QS ++DLIS+MQ++WP+L+CPS+ G + WS EW++HGTC+E+V DQH YF
Sbjct: 77  SNCDSNSPYDQSQVSDLISRMQQNWPTLACPSDTGSAFWSHEWEKHGTCAENVFDQHGYF 136

Query: 394 KSALNLKNRVNLLMTLHNAGIKPDGKHYSTDSVMEAVSTKTGYYPGVQCNTDKFGKIQLH 215
           K AL+LKN++NLL  L  AGI PDG  YS +++  A+ +  GY PG++CN D+ G  QL+
Sbjct: 137 KKALDLKNQINLLEILQGAGINPDGGFYSLNNIKNAIRSAVGYTPGIECNVDESGNSQLY 196

Query: 214 EIYICVDTPASRFIECPGLPKSRCTSNIKFATF 116
           ++YICVD   S  IECP  P+ +C S+I+F TF
Sbjct: 197 QVYICVDGSGSDLIECPVFPRGKCGSSIEFPTF 229


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