BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030984
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...    98   6e-19
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]               96   3e-18
ref|XP_002321582.1| rna-dependent RNA polymerase [Populus tricho...    96   3e-18
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]               92   4e-17
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...    91   1e-16

>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/90 (53%), Positives = 65/90 (72%)
 Frame = +3

Query: 18  LTMEESRDFHTSSELNPLVKCPTDFELSYEVLFQLNSLIHTHKLSLAAVDSDLIEFLSNL 197
           L ++E  D +++SEL PL   P+D +L YE+LFQLNSLIHTHK+SL AV +DLIE LS L
Sbjct: 261 LVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNSLIHTHKISLGAVKTDLIEVLSKL 320

Query: 198 DMVKAVALLRKMHTLPYRCCNPMRFINTQL 287
           ++  A+ +L+KMH L   C  P+ FI T+L
Sbjct: 321 ELDTAMMILQKMHKLQSTCFEPVPFIKTRL 350


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/99 (46%), Positives = 70/99 (70%)
 Frame = +3

Query: 3   EEFSTLTMEESRDFHTSSELNPLVKCPTDFELSYEVLFQLNSLIHTHKLSLAAVDSDLIE 182
           E+  + ++E  R+F + SE+ PLVK P+D +L+YE+LFQLN+L+HT K+S+AAVD+DLI 
Sbjct: 256 EDIQSPSLEARREFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAAVDTDLIG 315

Query: 183 FLSNLDMVKAVALLRKMHTLPYRCCNPMRFINTQLESEK 299
            LS L +  AV +L+K+  L   C NP+ F+  +L + K
Sbjct: 316 ILSGLPVETAVMILQKLRLLQSPCYNPVSFVKAKLPTGK 354


>ref|XP_002321582.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222868578|gb|EEF05709.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 1110

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/95 (48%), Positives = 69/95 (72%)
 Frame = +3

Query: 3   EEFSTLTMEESRDFHTSSELNPLVKCPTDFELSYEVLFQLNSLIHTHKLSLAAVDSDLIE 182
           E+ + L +E+  +F ++SE  PL++C +D +L+YEVLFQLNSL+HT K+SLAAVDSDLI+
Sbjct: 256 EDMNRLDLEDGEEFCSASETVPLIRCGSD-KLAYEVLFQLNSLVHTQKISLAAVDSDLIK 314

Query: 183 FLSNLDMVKAVALLRKMHTLPYRCCNPMRFINTQL 287
            L NL +  A+ +L+K+H L   C +P+ F+   L
Sbjct: 315 ILRNLTVNTAIIILQKLHKLKMTCYDPLSFVKQSL 349


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/99 (45%), Positives = 69/99 (69%)
 Frame = +3

Query: 3   EEFSTLTMEESRDFHTSSELNPLVKCPTDFELSYEVLFQLNSLIHTHKLSLAAVDSDLIE 182
           E+  + ++E   +F + SE+ PLVK P+D +L+YE+LFQLN+L+HT K+S+AAVD+DLI 
Sbjct: 256 EDIQSPSLEARGEFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAAVDTDLIG 315

Query: 183 FLSNLDMVKAVALLRKMHTLPYRCCNPMRFINTQLESEK 299
            LS L +  AV +L+K+  L   C NP+ F+  +L + K
Sbjct: 316 ILSVLPVETAVMILQKLRLLQSPCYNPVSFVKAKLPTGK 354


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223550546|gb|EEF52033.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 983

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/88 (48%), Positives = 64/88 (72%)
 Frame = +3

Query: 24  MEESRDFHTSSELNPLVKCPTDFELSYEVLFQLNSLIHTHKLSLAAVDSDLIEFLSNLDM 203
           +E+  ++ ++SE+ PLVKC +D +L YE+LFQLNSL+HT K+SLAAVD++LI  L +L +
Sbjct: 110 LEDGEEWGSASEIVPLVKCGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTI 169

Query: 204 VKAVALLRKMHTLPYRCCNPMRFINTQL 287
             A  +L+K+H L   C +P+ FI  QL
Sbjct: 170 DTATMILQKLHKLAVTCYDPLAFIKKQL 197